RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 SLC29A3Q9BZD2 475 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 ANKMY1Q9P2S6 941 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 NDOR1Q9UHB4 597 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 SNX7Q9UNH6 387 aa9.04□□□□□ -0.96
HMGCLL1-206ENST00000428842 COL27A1Q8IZC6 1860 aaPredicted RBP9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 PSMD12O00232 456 aaPredicted RBP9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 TNFSF14O43557 240 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 LDB3O75112 727 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 CPNE6O95741 557 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 LAMP1P11279 417 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 PIM1P11309 404 aaPredicted RBP9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 ZNF28P17035 718 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 CKMT2P17540 419 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 PPP2R1BP30154 601 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 NBL1P41271 181 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 DPP6P42658 865 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 CDKN2CP42773 168 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 GABRA4P48169 554 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 SESN3P58005 492 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 SIM1P81133 766 aaPredicted RBP9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 RUNX2Q13950 521 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 MPEG1Q2M385 716 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 OR4F3Q6IEY1 312 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 ASPGQ86U10 573 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 C10orf111Q8N326 155 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 ACTRT2Q8TDY3 377 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 UTP15Q8TED0 518 aaKnown RBP9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 CHTF18Q8WVB6 975 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 SLC22A18Q96BI1 424 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 C10orf90Q96M02 699 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 GFM1Q96RP9 751 aaKnown RBP9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 INPP5KQ9BT40 448 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 TWSG1Q9GZX9 223 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 PELI2Q9HAT8 420 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 PRDM7Q9NQW5 492 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 FGF21Q9NSA1 209 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 AIG1Q9NVV5 245 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 SLC7A8Q9UHI5 535 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 ANGPTL2Q9UKU9 493 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 AP1M2Q9Y6Q5 423 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 TPRP12270 2363 aaKnown RBP9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 TLCD2A6NGC4 264 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 ZNF839A8K0R7 811 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 MASP2O00187 686 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 CIB2O75838 187 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 SPINK2P20155 84 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 ETV5P41161 510 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 ARL4DP49703 201 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 ACADVLP49748 655 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 SLAMF1Q13291 335 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 CSRP2Q16527 193 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 CCNYL2Q5T2Q4 361 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 PWWP2BQ6NUJ5 590 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 ABHD17CQ6PCB6 329 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 ZFAND4Q86XD8 727 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 DNAJC22Q8N4W6 341 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 ACOT4Q8N9L9 421 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 MFSD9Q8NBP5 474 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 PNPT1Q8TCS8 783 aaKnown RBP9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 LOXL4Q96JB6 756 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 PCBD2Q9H0N5 130 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 EHD1Q9H4M9 534 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 C1GALT1Q9NS00 363 aa9.03□□□□□ -0.96
HMGCLL1-206ENST00000428842 SDK2Q58EX2 2172 aa9.02□□□□□ -0.96
HMGCLL1-206ENST00000428842 A0A088AWK7 358 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 DPPA5A6NC42 116 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 GABRR3A8MPY1 467 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 D6RAR5 112 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 SLCO1B7G3V0H7 640 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 CFLARO15519 480 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 UGDHO60701 494 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 TCN1P20061 433 aaPredicted RBP9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 CUL3Q13618 768 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 SPIDRQ14159 915 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 MAP7Q14244 749 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 UGT8Q16880 541 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 SLC5A12Q1EHB4 618 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 C6orf163Q5TEZ5 329 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 DBX2Q6ZNG2 339 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 WDR53Q7Z5U6 358 aaPredicted RBP9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 LAPTM4BQ86VI4 370 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 PLXDC1Q8IUK5 500 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 AFAP1L2Q8N4X5 818 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 FAM181AQ8N9Y4 354 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 ADCY4Q8NFM4 1077 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 OR5AK3PQ8NH89 298 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 KLHL6Q8WZ60 621 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 RERGQ96A58 199 aaPredicted RBP9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 EXOSC8Q96B26 276 aaKnown RBP9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 ZDHHC12Q96GR4 267 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 MAGED4Q96JG8 741 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 TMEM74Q96NL1 305 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 THTPAQ9BU02 230 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 YIPF2Q9BWQ6 316 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 PDE7BQ9NP56 450 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 SLAMF7Q9NQ25 335 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 RIC8BQ9NVN3 520 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 SH3BP4Q9P0V3 963 aa9.02□□□□□ -0.97
HMGCLL1-206ENST00000428842 ENTPD2Q9Y5L3 495 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms