RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 ZFATQ9P243 1243 aa8.39□□□□□ -1.07
LSG1-202ENST00000427461 CTTNBP2NLQ9P2B4 639 aa8.39□□□□□ -1.07
LSG1-202ENST00000427461 LIMA1Q9UHB6 759 aaKnown RBP8.39□□□□□ -1.07
LSG1-202ENST00000427461 TRHDEQ9UKU6 1024 aa8.39□□□□□ -1.07
LSG1-202ENST00000427461 SLC6A5Q9Y345 797 aa8.39□□□□□ -1.07
LSG1-202ENST00000427461 MED12LQ86YW9 2145 aa8.39□□□□□ -1.07
LSG1-202ENST00000427461 RYR3Q15413 4870 aa8.39□□□□□ -1.07
LSG1-202ENST00000427461 KMT2CQ8NEZ4 4911 aaKnown RBP8.38□□□□□ -1.07
LSG1-202ENST00000427461 KCNE1BA0A087WTH5 132 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 A0A096LNT2 108 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 TGFBR3LH3BV60 316 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 SMAPO00193 183 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 GALR3O60755 368 aaPredicted RBP8.38□□□□□ -1.07
LSG1-202ENST00000427461 LRATO95237 230 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 CCNDBP1O95273 360 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 TNNT1P13805 278 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 ZNF16P17020 682 aaPredicted RBP8.38□□□□□ -1.07
LSG1-202ENST00000427461 IGFBP5P24593 272 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 PNLIPRP1P54315 467 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 RPS15AP62244 130 aaKnown RBP8.38□□□□□ -1.07
LSG1-202ENST00000427461 KCNJ2P63252 427 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 MEF2AQ02078 507 aaPredicted RBP8.38□□□□□ -1.07
LSG1-202ENST00000427461 TMED2Q15363 201 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 ETFDHQ16134 617 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 P3H1Q32P28 736 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 CT47A1Q5JQC4 288 aaPredicted RBP8.38□□□□□ -1.07
LSG1-202ENST00000427461 ZNF704Q6ZNC4 412 aaPredicted RBP8.38□□□□□ -1.07
LSG1-202ENST00000427461 SYDE1Q6ZW31 735 aaPredicted RBP8.38□□□□□ -1.07
LSG1-202ENST00000427461 BZW1Q7L1Q6 419 aaKnown RBP8.38□□□□□ -1.07
LSG1-202ENST00000427461 APTXQ7Z2E3 356 aaKnown RBP8.38□□□□□ -1.07
LSG1-202ENST00000427461 ASPGQ86U10 573 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 SPNS2Q8IVW8 549 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 ZNF321PQ8N8H1 164 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 CAMKVQ8NCB2 501 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 ZNF740Q8NDX6 193 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 MAGEC3Q8TD91 643 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 ZNF480Q8WV37 535 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 SLC13A3Q8WWT9 602 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 WDYHV1Q96HA8 205 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 ART5Q96L15 291 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 FOPNLQ96NB1 174 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 QKIQ96PU8 341 aaKnown RBP eCLIP8.38□□□□□ -1.07
LSG1-202ENST00000427461 PKP4Q99569 1192 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 TSSK1BQ9BXA7 367 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 RHBGQ9H310 441 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 ARNT2Q9HBZ2 717 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 ZFP64Q9NPA5 681 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 HOMER3Q9NSC5 361 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 PPIEQ9UNP9 301 aaKnown RBP8.38□□□□□ -1.07
LSG1-202ENST00000427461 SH2B3Q9UQQ2 575 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 AAR2Q9Y312 384 aaKnown RBP8.38□□□□□ -1.07
LSG1-202ENST00000427461 MRFAP1Q9Y605 127 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 SLC22A7Q9Y694 548 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 MALRD1Q5VYJ5 2156 aa8.38□□□□□ -1.07
LSG1-202ENST00000427461 IGHV4-30-2A0A087WSY4 118 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 A0A087X0T9 212 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.37□□□□□ -1.07
LSG1-202ENST00000427461 E7ENX8 843 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 F8W8V4 182 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 OVOL3O00110 214 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 KPNA5O15131 536 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 MATN4O95460 622 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 ACSL3O95573 720 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 SLC16A8O95907 504 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 GOT2P00505 430 aaKnown RBP8.37□□□□□ -1.07
LSG1-202ENST00000427461 IGHV4-39P01824 125 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 FAM228BP0C875 321 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 ITGA2P17301 1181 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 GDF1P27539 372 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 RPS4XP62701 263 aaKnown RBP8.37□□□□□ -1.07
LSG1-202ENST00000427461 ABATP80404 500 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 TAP2Q03519 686 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 ANKRD20A4Q4UJ75 823 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 ANKRD20A2Q5SQ80 823 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 THEMIS2Q5TEJ8 643 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 MEI1Q5TIA1 1274 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 ANKRD20A1Q5TYW2 823 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 ANKRD20A3Q5VUR7 823 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 ANKRD34AQ69YU3 496 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 CAPN13Q6MZZ7 669 aaPredicted RBP8.37□□□□□ -1.07
LSG1-202ENST00000427461 ZNF534Q76KX8 674 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.37□□□□□ -1.07
LSG1-202ENST00000427461 VSIG1Q86XK7 387 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 PM20D2Q8IYS1 436 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 AFAP1L2Q8N4X5 818 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 ZNF611Q8N823 705 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 P3H4Q92791 437 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 NTNG2Q96CW9 530 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 TRMT61AQ96FX7 289 aaKnown RBP8.37□□□□□ -1.07
LSG1-202ENST00000427461 SGCZQ96LD1 299 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 FAM111AQ96PZ2 611 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 EBNA1BP2Q99848 306 aaKnown RBP8.37□□□□□ -1.07
LSG1-202ENST00000427461 SFXN3Q9BWM7 321 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 C12orf65Q9H3J6 166 aaKnown RBP8.37□□□□□ -1.07
LSG1-202ENST00000427461 CALHM2Q9HA72 323 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 ZNHIT6Q9NWK9 470 aaKnown RBP8.37□□□□□ -1.07
LSG1-202ENST00000427461 SLC2A6Q9UGQ3 507 aa8.37□□□□□ -1.07
LSG1-202ENST00000427461 GDF2Q9UK05 429 aaPredicted RBP8.37□□□□□ -1.07
LSG1-202ENST00000427461 BOKQ9UMX3 212 aaPredicted RBP8.37□□□□□ -1.07
LSG1-202ENST00000427461 MYOCOSA0A1B0GUC4 107 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms