RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 TMEM100Q9NV29 134 aa13.96□□□□□ -0.18
PTPN13-203ENST00000427191 GABBR2O75899 941 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 SFTPBP07988 381 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 NFKBIDQ8NI38 313 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 ZNF675Q8TD23 568 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 TMEM203Q969S6 136 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 BRF2Q9HAW0 419 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 DAOAP59103 153 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 HNRNPA0Q13151 305 aaKnown RBP13.95□□□□□ -0.18
PTPN13-203ENST00000427191 PTCHD3Q3KNS1 767 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 TIFABQ6ZNK6 161 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 PSMG2Q969U7 264 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 SHDQ96IW2 340 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 ACSL5Q9ULC5 683 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 DUOX1Q9NRD9 1551 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 DNASE1P24855 282 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 ARL2P36404 184 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 GSK3BP49841 420 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 TRIB2Q92519 343 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 BTF3L4Q96K17 158 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 ERVK-18Q9QC07 812 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 STUB1Q9UNE7 303 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 CCL16O15467 120 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 LATO43561 262 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 LILRA4P59901 499 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 CCINQ13939 588 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 RASGRP3Q8IV61 690 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 TMEM156Q8N614 296 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 ADAMTS18Q8TE60 1221 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 AKT1S1Q96B36 256 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 KCNS2Q9ULS6 477 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 LMO7Q8WWI1 1683 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 BHMG1C9JSJ3 638 aaPredicted RBP13.95□□□□□ -0.18
PTPN13-203ENST00000427191 LPLP06858 475 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 ETV6P41212 452 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 NKX6-1P78426 367 aaPredicted RBP13.95□□□□□ -0.18
PTPN13-203ENST00000427191 PTPRRQ15256 657 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 DNAAF1Q8NEP3 725 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 TERB2Q8NHR7 220 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 C9IYK1 514 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 GRIK5Q16478 980 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 SDHAF4Q5VUM1 108 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 SUV39H2Q9H5I1 410 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 CROCCQ5TZA2 2017 aa13.95□□□□□ -0.18
PTPN13-203ENST00000427191 TMEM88BA6NKF7 163 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 FAM159BA6NKW6 160 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 SLC22A31A6NKX4 558 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 CTSOP43234 321 aaPredicted RBP13.94□□□□□ -0.18
PTPN13-203ENST00000427191 FAM110CQ1W6H9 321 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 ARSHQ5FYA8 562 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 POGLUT1Q8NBL1 392 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 VNN3Q9NY84 501 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 CD84Q9UIB8 345 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 HIF3AQ9Y2N7 669 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 HAS3O00219 553 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 RAC2P15153 192 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 TSSK6Q9BXA6 273 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 SLA2Q9H6Q3 261 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 SERTAD3Q9UJW9 196 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 POLR1CO15160 346 aaPredicted RBP13.94□□□□□ -0.18
PTPN13-203ENST00000427191 SLC34A2O95436 690 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 IL33O95760 270 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 PRKCHP24723 683 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 LDB1Q86U70 411 aaPredicted RBP13.94□□□□□ -0.18
PTPN13-203ENST00000427191 GLIS3Q8NEA6 775 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 RNF128Q8TEB7 428 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 PGAP3Q96FM1 320 aaPredicted RBP13.94□□□□□ -0.18
PTPN13-203ENST00000427191 KCNIP1Q9NZI2 227 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 EPHA6Q9UF33 1036 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 SLC38A8A6NNN8 435 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 MAFKO60675 156 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 TAL1P17542 331 aaPredicted RBP13.94□□□□□ -0.18
PTPN13-203ENST00000427191 PPP5CP53041 499 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 LIPJQ5W064 366 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 ZNF529Q6P280 563 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 ELMOD2Q8IZ81 293 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 KIAA1191Q96A73 305 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 CHFRQ96EP1 664 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 GPR20Q99678 358 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 CCDC106Q9BWC9 280 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 ATG5Q9H1Y0 275 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 OR51I1Q9H343 314 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 TPT1P8Q9HAU6 139 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 ADGRB1O14514 1584 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 OR2B3O76000 313 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 SLC45A3Q96JT2 553 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 YIPF4Q9BSR8 244 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 DDX4Q9NQI0 724 aaKnown RBP13.94□□□□□ -0.18
PTPN13-203ENST00000427191 GPRC5BQ9NZH0 403 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 EXTL2Q9UBQ6 330 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 NAP1L6A6NFF2 107 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 A8MT66 165 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 CYB5BO43169 146 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 ATE1O95260 518 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 VIPR1P32241 457 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 CDK3Q00526 305 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 THOC6Q86W42 341 aaKnown RBP13.94□□□□□ -0.18
PTPN13-203ENST00000427191 MGAT4CQ9UBM8 478 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 ZNF487B1APH4 448 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 B4GALT5O43286 388 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms