RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 SCELO95171 688 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 NSA2O95478 260 aaKnown RBP6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 B3GALT4O96024 378 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 IGHA1P01876 353 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 KRT6AP02538 564 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 KRT6BP04259 564 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 SERPIND1P05546 499 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 HBQ1P09105 142 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 ZNF888P0CJ79 500 aaPredicted RBP6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 HSD3B1P14060 373 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 ALOX12P18054 663 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 HSD3B2P26439 372 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 HMOX2P30519 316 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 BSGP35613 385 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 KRT6CP48668 564 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 ARFIP1P53367 373 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 STXBP1P61764 594 aaKnown RBP6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 DCDP81605 110 aaKnown RBP6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 RGS1Q08116 209 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 TBL3Q12788 808 aaKnown RBP6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 CSTF3Q12996 717 aaKnown RBP6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 IFT88Q13099 833 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 NDUFA9Q16795 377 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 NKAIN1Q4KMZ8 207 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 TMEM35AQ53FP2 167 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 HSP90B2PQ58FF3 399 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 TOR1AIP1Q5JTV8 583 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 SH2D4BQ5SQS7 431 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 KHDRBS2Q5VWX1 349 aaKnown RBP6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 KANK2Q63ZY3 851 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 ATG16L1Q676U5 607 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 PRMT9Q6P2P2 845 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 ABHD17CQ6PCB6 329 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 FAM199XQ6PEV8 388 aaPredicted RBP6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 SCIMPQ6UWF3 145 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 C6orf15Q6UXA7 325 aaPredicted RBP6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 RGS9BPQ6ZS82 235 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 Q6ZSR9 355 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 MED25Q71SY5 747 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 COX15Q7KZN9 410 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 MYLK4Q86YV6 388 aaPredicted RBP6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 TRIM42Q8IWZ5 723 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 ZNF781Q8N8C0 355 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 AMER3Q8N944 861 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 OR2L5Q8NG80 312 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 OR9A4Q8NGU2 314 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 PPP1R14CQ8TAE6 165 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 PROKR1Q8TCW9 393 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 CHTF18Q8WVB6 975 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 SELENOMQ8WWX9 145 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 FGF11Q92914 225 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 NKD1Q969G9 470 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 GAL3ST3Q96A11 431 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 CMTM7Q96FZ5 175 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 NLNQ9BYT8 704 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 ACPTQ9BZG2 426 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 REXO4Q9GZR2 422 aaKnown RBP6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 ILKAPQ9H0C8 392 aaPredicted RBP6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 ELOVL6Q9H5J4 265 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 EML4Q9HC35 981 aaKnown RBP6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 THAP1Q9NVV9 213 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 PADI1Q9ULC6 663 aa6.69□□□□□ -1.34
CHCHD3P1-201ENST00000425516 IGLV3-12A0A075B6K2 115 aa6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 A0A0A6YYC8 382 aaPredicted RBP6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 LOC101059948A0A1B0GTJ6 334 aa6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 URADA6NGE7 173 aa6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 VSTM2BA6NLU5 285 aa6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 STMND1H3BQB6 276 aa6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 I3L1I5 382 aaPredicted RBP6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 J3QW42 95 aa6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 SGK494L7N484 410 aa6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 TAF4O00268 1085 aa6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 RTCAO00442 366 aaKnown RBP6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 ZNF195O14628 629 aa6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 ERI3O43414 337 aaKnown RBP6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 RAD1O60671 282 aa6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 CNOT3O75175 753 aaKnown RBP6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 SH3BGRLO75368 114 aa6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 SEMA3DO95025 777 aa6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 HSPA4LO95757 839 aa6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 JUNP05412 331 aaKnown RBP6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 FURINP09958 794 aa6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 RAB40ALP0C0E4 278 aa6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 C1QTNF9P0C862 333 aa6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 LIPCP11150 499 aa6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 NEFHP12036 1026 aa6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 IL1RNP18510 177 aa6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 F8A1P23610 371 aa6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 ATP5A1P25705 553 aaKnown RBP6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 ARL1P40616 181 aaPredicted RBP6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 STAT5AP42229 794 aa6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 TSFMP43897 325 aaKnown RBP6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 OR1D4P47884 311 aa6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 RPL14P50914 215 aaKnown RBP6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 RAB8AP61006 207 aa6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 ABHD18Q0P651 414 aa6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 DDX39BQ13838 428 aaKnown RBP6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 RUNX2Q13950 521 aa6.68□□□□□ -1.34
CHCHD3P1-201ENST00000425516 HERC3Q15034 1050 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms