RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 SMIM30A4D0T7 59 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 C4orf51C9J302 202 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 TNFRSF11BO00300 401 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 PCDHGA12O60330 932 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 AP2A2O94973 939 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 BMP10O95393 424 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 EIF2S1P05198 315 aaKnown RBP11.38□□□□□ -0.59
PTPRN-204ENST00000423636 FURINP09958 794 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 HOXB9P17482 250 aaPredicted RBP11.38□□□□□ -0.59
PTPRN-204ENST00000423636 DDX6P26196 483 aaKnown RBP eCLIP11.38□□□□□ -0.59
PTPRN-204ENST00000423636 GPC1P35052 558 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 ARHGDIAP52565 204 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 DCDC1P59894 354 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 NAA20P61599 178 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 KCNJ10P78508 379 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 EMX1Q04741 257 aaPredicted RBP11.38□□□□□ -0.59
PTPRN-204ENST00000423636 GGTA1PQ4G0N0 100 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 TPRG1LQ5T0D9 272 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 BROXQ5VW32 411 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 KIAA0907Q7Z7F0 614 aaPredicted RBP11.38□□□□□ -0.59
PTPRN-204ENST00000423636 CCDC116Q8IYX3 515 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 HORMAD2Q8N7B1 307 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 OR10G6Q8NH81 332 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 NDNFQ8TB73 568 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 EZH1Q92800 747 aaPredicted RBP11.38□□□□□ -0.59
PTPRN-204ENST00000423636 CCDC115Q96NT0 180 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 NODALQ96S42 347 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 C6orf106Q9H6K1 298 aaPredicted RBP11.38□□□□□ -0.59
PTPRN-204ENST00000423636 WDR26Q9H7D7 661 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 C11orf16Q9NQ32 467 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 IL20RAQ9UHF4 553 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 ZNF639Q9UID6 485 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 MAN2B2Q9Y2E5 1009 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 TMEM229AB2RXF0 380 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 PGRMC2O15173 223 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 B4GALT2O60909 372 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 GPX2P18283 190 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 ACADLP28330 430 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 HLCSP50747 726 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 MAPK11Q15759 364 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 SYPL1Q16563 259 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 PERM1Q5SV97 790 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 PLPP6Q8IY26 295 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 FBXL6Q8N531 539 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 ZCCHC10Q8TBK6 192 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 MUC13Q9H3R2 512 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 SNX5Q9Y5X3 404 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 ASPMQ8IZT6 3477 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 COL4A3Q01955 1670 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 LTBP2Q14767 1821 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 H0YJX3 145 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 RETP07949 1114 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 SRPRAP08240 638 aaKnown RBP11.38□□□□□ -0.59
PTPRN-204ENST00000423636 FCARP24071 287 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 ELP6Q0PNE2 266 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 ILF2Q12905 390 aaKnown RBP11.38□□□□□ -0.59
PTPRN-204ENST00000423636 CSTF3Q12996 717 aaKnown RBP11.38□□□□□ -0.59
PTPRN-204ENST00000423636 SGCGQ13326 291 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 CARTPTQ16568 116 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 FXNQ16595 210 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 AGBL4Q5VU57 503 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 TTC23Q5W5X9 447 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 C18orf63Q68DL7 685 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 KIAA1324Q6UXG2 1013 aaKnown RBP11.38□□□□□ -0.59
PTPRN-204ENST00000423636 LRRTM4Q86VH4 590 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 NLRP8Q86W28 1048 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 OR2L2Q8NH16 312 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 RNF217Q8TC41 542 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 GPR83Q9NYM4 423 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 NDUFAF4Q9P032 175 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 MARK1Q9P0L2 795 aa11.38□□□□□ -0.59
PTPRN-204ENST00000423636 URB1O60287 2271 aaKnown RBP11.38□□□□□ -0.59
PTPRN-204ENST00000423636 CACNA1CQ13936 2221 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 LOC100506127A0A0U1RQW1 187 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 C1orf226A1L170 272 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 ISM1B1AKI9 464 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 H3BQ06 376 aaPredicted RBP11.37□□□□□ -0.59
PTPRN-204ENST00000423636 M0R3H8 397 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 PFDN1O60925 122 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 HNRNPA1P09651 372 aaKnown RBP eCLIP11.37□□□□□ -0.59
PTPRN-204ENST00000423636 OR12D1P0DN82 309 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 MVDP53602 400 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 CDK6Q00534 326 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 MTAPQ13126 283 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 GPR19Q15760 415 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 ZNF773Q6PK81 442 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 C11orf65Q8NCR3 313 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 MIPOL1Q8TD10 442 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 RAD51AP1Q96B01 352 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 ZG16BQ96DA0 208 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 PPP1R16AQ96I34 528 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 POLE4Q9NR33 117 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 STARD5Q9NSY2 213 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 NDUFA13Q9P0J0 144 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 TMED5Q9Y3A6 229 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 OR2W5A6NFC9 320 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 SLC16A5O15375 505 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 HOXC11O43248 304 aaPredicted RBP11.37□□□□□ -0.59
PTPRN-204ENST00000423636 KRT20P35900 424 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 SSR2P43308 183 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms