RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 STSP08842 583 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 RBP1P09455 135 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 COL6A2P12110 1019 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 COX7A2P14406 83 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 TLX1P31314 330 aaPredicted RBP8.11□□□□□ -1.11
MDC1-204ENST00000422266 PIK3CBP42338 1070 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 CYB561P49447 251 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 PLA2G16P53816 162 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 SLC7A5Q01650 507 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 OC90Q02509 493 aaPredicted RBP8.11□□□□□ -1.11
MDC1-204ENST00000422266 SRSF1Q07955 248 aaKnown RBP eCLIP8.11□□□□□ -1.11
MDC1-204ENST00000422266 DOC2AQ14183 400 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 NAA30Q147X3 362 aaPredicted RBP8.11□□□□□ -1.11
MDC1-204ENST00000422266 UAP1Q16222 522 aaPredicted RBP8.11□□□□□ -1.11
MDC1-204ENST00000422266 AP5B1Q2VPB7 878 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 MROH9Q5TGP6 573 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 GPALPP1Q8IXQ4 340 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 LAS2Q8IYD9 372 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 CYP4X1Q8N118 509 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 CA13Q8N1Q1 262 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 TMEM132CQ8N3T6 1108 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 SPATA6LQ8N4H0 392 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 POGLUT1Q8NBL1 392 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 CATSPER1Q8NEC5 780 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 EXT2Q93063 718 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 VMP1Q96GC9 406 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 ATOH8Q96SQ7 321 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 FUT8Q9BYC5 575 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 RBCK1Q9BYM8 510 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 DEFB126Q9BYW3 111 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 SPNS1Q9H2V7 528 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 ADAP2Q9NPF8 381 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 PRTFDC1Q9NRG1 225 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 SNX15Q9NRS6 342 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 ZDHHC18Q9NUE0 388 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 PSD3Q9NYI0 1048 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 PLA2G3Q9NZ20 509 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 SUCOQ9UBS9 1254 aaKnown RBP8.11□□□□□ -1.11
MDC1-204ENST00000422266 PLEKHB1Q9UF11 243 aaPredicted RBP8.11□□□□□ -1.11
MDC1-204ENST00000422266 DAPP1Q9UN19 280 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 CSAG2Q9Y5P2 127 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 CLCA3PQ9Y6N3 262 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 SCN2AQ99250 2005 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 SCN3AQ9NY46 2000 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 POLEQ07864 2286 aa8.11□□□□□ -1.11
MDC1-204ENST00000422266 A0A096LPK6 155 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 ESYT3A0FGR9 886 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 CTNSO60931 367 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 MAOAP21397 527 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 PTX3P26022 381 aaPredicted RBP8.1□□□□□ -1.11
MDC1-204ENST00000422266 HNRNPH1P31943 449 aaKnown RBP8.1□□□□□ -1.11
MDC1-204ENST00000422266 TRHRP34981 398 aaPredicted RBP8.1□□□□□ -1.11
MDC1-204ENST00000422266 MSH2P43246 934 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 RAP1GDS1P52306 607 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 OLR1P78380 273 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 SRSF11Q05519 484 aaKnown RBP8.1□□□□□ -1.11
MDC1-204ENST00000422266 STX4Q12846 297 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 TUBA3CQ13748 450 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 SETDB1Q15047 1291 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 PCBP2Q15366 365 aaKnown RBP eCLIP8.1□□□□□ -1.11
MDC1-204ENST00000422266 OR1C1Q15619 314 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 ELAVL1Q15717 326 aaKnown RBP8.1□□□□□ -1.11
MDC1-204ENST00000422266 ZNF324BQ6AW86 544 aaPredicted RBP8.1□□□□□ -1.11
MDC1-204ENST00000422266 GRHL2Q6ISB3 625 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 ABHD17CQ6PCB6 329 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 TUBA3EQ6PEY2 450 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 GFRALQ6UXV0 394 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 CMC1Q7Z7K0 106 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 LCA5Q86VQ0 697 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 CRLF3Q8IUI8 442 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 SPNS2Q8IVW8 549 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 SCUBE1Q8IWY4 988 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 BEST3Q8N1M1 668 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 ARMC10Q8N2F6 343 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 B3GNT7Q8NFL0 401 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 SLC44A1Q8WWI5 657 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 TSLPQ969D9 159 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 RGMAQ96B86 450 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 NXNL1Q96CM4 212 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 MTBPQ96DY7 904 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 ART5Q96L15 291 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 MESP1Q9BRJ9 268 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 UNKQ9C0B0 810 aaKnown RBP8.1□□□□□ -1.11
MDC1-204ENST00000422266 KLHL31Q9H511 634 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 CDCP1Q9H5V8 836 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 TRIM45Q9H8W5 580 aaPredicted RBP8.1□□□□□ -1.11
MDC1-204ENST00000422266 ACTR8Q9H981 624 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 IGSF5Q9NSI5 407 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.1□□□□□ -1.11
MDC1-204ENST00000422266 LRFN1Q9P244 771 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 SEC14L3Q9UDX4 400 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 PHF11Q9UIL8 331 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 ZNF180Q9UJW8 692 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 PPIEQ9UNP9 301 aaKnown RBP8.1□□□□□ -1.11
MDC1-204ENST00000422266 NTNG1Q9Y2I2 539 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 KLF13Q9Y2Y9 288 aaPredicted RBP8.1□□□□□ -1.11
MDC1-204ENST00000422266 LRRK2Q5S007 2527 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 PTPN13Q12923 2485 aa8.1□□□□□ -1.11
MDC1-204ENST00000422266 SPTBN1Q01082 2364 aaKnown RBP8.09□□□□□ -1.11
MDC1-204ENST00000422266 A0A087WUV0 522 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms