RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 HS3ST3B1Q9Y662 390 aa14.87□□□□□ -0.03
BRAT1-202ENST00000421712 LOC400499M0QZD8 3231 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 WDR91A4D1P6 747 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 A6NL46 340 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 FAM227AF5H4B4 570 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 AGPSO00116 658 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 MANBAO00462 879 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 SOCS6O14544 535 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 ULK1O75385 1050 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 ESRRBO95718 433 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 ENO1P06733 434 aaKnown RBP14.86□□□□□ -0.03
BRAT1-202ENST00000421712 C8orf89P0DMQ9 161 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 ACPPP15309 386 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 ATP5A1P25705 553 aaKnown RBP14.86□□□□□ -0.03
BRAT1-202ENST00000421712 SLAMF1Q13291 335 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 CUL3Q13618 768 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 RCN2Q14257 317 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 TUBB8Q3ZCM7 444 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 CPZQ66K79 652 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 KIRREL2Q6UWL6 708 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 FRMD7Q6ZUT3 714 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 UBE3DQ7Z6J8 389 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 NUDCD3Q8IVD9 361 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 ACOT4Q8N9L9 421 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 CLEC1AQ8NC01 280 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 AGAP11Q8TF27 550 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 CNDP1Q96KN2 507 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 PAIP2Q9BPZ3 127 aaKnown RBP14.86□□□□□ -0.03
BRAT1-202ENST00000421712 GATA5Q9BWX5 397 aaPredicted RBP14.86□□□□□ -0.03
BRAT1-202ENST00000421712 SORBS1Q9BX66 1292 aaKnown RBP14.86□□□□□ -0.03
BRAT1-202ENST00000421712 SLC29A3Q9BZD2 475 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 TMBIM4Q9HC24 238 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 SSU72Q9NP77 194 aaKnown RBP14.86□□□□□ -0.03
BRAT1-202ENST00000421712 NMRK1Q9NWW6 199 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 PSD3Q9NYI0 1048 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 AHSPQ9NZD4 102 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 ZNF225Q9UK10 706 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 SLC12A4Q9UP95 1085 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 TIMM22Q9Y584 194 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 ACTL7BQ9Y614 415 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 SPACA6W5XKT8 324 aa14.86□□□□□ -0.03
BRAT1-202ENST00000421712 MGAQ8IWI9 3026 aa14.85□□□□□ -0.03
BRAT1-202ENST00000421712 H3BQF6 201 aa14.85□□□□□ -0.03
BRAT1-202ENST00000421712 PLPP1O14494 284 aa14.85□□□□□ -0.03
BRAT1-202ENST00000421712 TM9SF1O15321 606 aa14.85□□□□□ -0.03
BRAT1-202ENST00000421712 PRMT3O60678 531 aa14.85□□□□□ -0.03
BRAT1-202ENST00000421712 DNAJB5O75953 348 aa14.85□□□□□ -0.03
BRAT1-202ENST00000421712 ZWINTO95229 277 aa14.85□□□□□ -0.03
BRAT1-202ENST00000421712 ETHE1O95571 254 aa14.85□□□□□ -0.03
BRAT1-202ENST00000421712 BPGMP07738 259 aa14.85□□□□□ -0.03
BRAT1-202ENST00000421712 HIST1H1TP22492 207 aaPredicted RBP14.85□□□□□ -0.03
BRAT1-202ENST00000421712 LIM2P55344 173 aa14.85□□□□□ -0.03
BRAT1-202ENST00000421712 RAB38P57729 211 aa14.85□□□□□ -0.03
BRAT1-202ENST00000421712 MAGOHP61326 146 aaKnown RBP14.85□□□□□ -0.03
BRAT1-202ENST00000421712 EEF1A2Q05639 463 aaKnown RBP14.85□□□□□ -0.03
BRAT1-202ENST00000421712 ACTN3Q08043 901 aaPredicted RBP14.85□□□□□ -0.03
BRAT1-202ENST00000421712 ABRAXAS2Q15018 415 aa14.85□□□□□ -0.03
BRAT1-202ENST00000421712 NSDHLQ15738 373 aa14.85□□□□□ -0.03
BRAT1-202ENST00000421712 TNFAIP8L3Q5GJ75 292 aa14.85□□□□□ -0.03
BRAT1-202ENST00000421712 TCHHL1Q5QJ38 904 aaPredicted RBP14.85□□□□□ -0.03
BRAT1-202ENST00000421712 FAM219BQ5XKK7 198 aa14.85□□□□□ -0.03
BRAT1-202ENST00000421712 CYP20A1Q6UW02 462 aa14.85□□□□□ -0.03
BRAT1-202ENST00000421712 ZNF793Q6ZN11 406 aa14.85□□□□□ -0.03
BRAT1-202ENST00000421712 APLFQ8IW19 511 aaPredicted RBP14.85□□□□□ -0.03
BRAT1-202ENST00000421712 GOLGA6L1Q8N7Z2 621 aa14.85□□□□□ -0.03
BRAT1-202ENST00000421712 ANKRD42Q8N9B4 389 aa14.85□□□□□ -0.03
BRAT1-202ENST00000421712 FAM47BQ8NA70 645 aa14.85□□□□□ -0.03
BRAT1-202ENST00000421712 PTCHD1Q96NR3 888 aa14.85□□□□□ -0.03
BRAT1-202ENST00000421712 KCNA7Q96RP8 456 aa14.85□□□□□ -0.03
BRAT1-202ENST00000421712 HBEGFQ99075 208 aa14.85□□□□□ -0.03
BRAT1-202ENST00000421712 ATP13A2Q9NQ11 1180 aa14.85□□□□□ -0.03
BRAT1-202ENST00000421712 C19orf25Q9UFG5 118 aaPredicted RBP14.85□□□□□ -0.03
BRAT1-202ENST00000421712 RALYQ9UKM9 306 aaKnown RBP14.85□□□□□ -0.03
BRAT1-202ENST00000421712 FBXW2Q9UKT8 454 aa14.85□□□□□ -0.03
BRAT1-202ENST00000421712 G3BP2Q9UN86 482 aaKnown RBP14.85□□□□□ -0.03
BRAT1-202ENST00000421712 MRPS33Q9Y291 106 aaKnown RBP14.85□□□□□ -0.03
BRAT1-202ENST00000421712 NSG1A0A0A6YYJ2 146 aa14.84□□□□□ -0.03
BRAT1-202ENST00000421712 ARHGAP10A1A4S6 786 aa14.84□□□□□ -0.03
BRAT1-202ENST00000421712 EIF4E1BA6NMX2 242 aaKnown RBP14.84□□□□□ -0.03
BRAT1-202ENST00000421712 MKRN2OSH3BPM6 223 aa14.84□□□□□ -0.03
BRAT1-202ENST00000421712 MASP2O00187 686 aa14.84□□□□□ -0.03
BRAT1-202ENST00000421712 CLDN4O14493 209 aa14.84□□□□□ -0.03
BRAT1-202ENST00000421712 UBFD1O14562 309 aaKnown RBP14.84□□□□□ -0.03
BRAT1-202ENST00000421712 PCDH17O14917 1159 aa14.84□□□□□ -0.03
BRAT1-202ENST00000421712 H2AFXP16104 143 aaPredicted RBP14.84□□□□□ -0.03
BRAT1-202ENST00000421712 BTG2P78543 158 aa14.84□□□□□ -0.03
BRAT1-202ENST00000421712 SLC13A2Q13183 592 aa14.84□□□□□ -0.03
BRAT1-202ENST00000421712 LY6DQ14210 128 aa14.84□□□□□ -0.03
BRAT1-202ENST00000421712 DCAF10Q5QP82 559 aa14.84□□□□□ -0.03
BRAT1-202ENST00000421712 SCIMPQ6UWF3 145 aa14.84□□□□□ -0.03
BRAT1-202ENST00000421712 ZCCHC23Q6ZST2 131 aa14.84□□□□□ -0.03
BRAT1-202ENST00000421712 EFCAB3Q8N7B9 438 aa14.84□□□□□ -0.03
BRAT1-202ENST00000421712 PLPP5Q8NEB5 264 aa14.84□□□□□ -0.03
BRAT1-202ENST00000421712 OR11G2Q8NGC1 345 aa14.84□□□□□ -0.03
BRAT1-202ENST00000421712 ADAMTS18Q8TE60 1221 aa14.84□□□□□ -0.03
BRAT1-202ENST00000421712 PKNOX2Q96KN3 472 aa14.84□□□□□ -0.03
BRAT1-202ENST00000421712 TRIM55Q9BYV6 548 aa14.84□□□□□ -0.03
BRAT1-202ENST00000421712 BRF2Q9HAW0 419 aa14.84□□□□□ -0.03
BRAT1-202ENST00000421712 EML4Q9HC35 981 aaKnown RBP14.84□□□□□ -0.03
BRAT1-202ENST00000421712 LYRM4Q9HD34 91 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms