RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 LSG1Q9H089 658 aaKnown RBP3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 WDR41Q9HAD4 459 aa3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 SLC7A10Q9NS82 523 aa3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 TSPAN16Q9UKR8 245 aa3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 ITGA11Q9UKX5 1188 aa3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 GPR132Q9UNW8 380 aa3.46□□□□□ -1.86
HMGB1P49-201ENST00000418882 TRGV8A0A0C4DH27 118 aa3.45□□□□□ -1.86
HMGB1P49-201ENST00000418882 ILVBLA1L0T0 632 aa3.45□□□□□ -1.86
HMGB1P49-201ENST00000418882 ZNF840PA6NDX5 716 aa3.45□□□□□ -1.86
HMGB1P49-201ENST00000418882 SLC30A4O14863 429 aa3.45□□□□□ -1.86
HMGB1P49-201ENST00000418882 B4GAT1O43505 415 aa3.45□□□□□ -1.86
HMGB1P49-201ENST00000418882 VENTXO95231 258 aa3.45□□□□□ -1.86
HMGB1P49-201ENST00000418882 SEMA4FO95754 770 aa3.45□□□□□ -1.86
HMGB1P49-201ENST00000418882 RENP00797 406 aa3.45□□□□□ -1.86
HMGB1P49-201ENST00000418882 IGHG3P01860 377 aa3.45□□□□□ -1.86
HMGB1P49-201ENST00000418882 LMO2P25791 158 aa3.45□□□□□ -1.86
HMGB1P49-201ENST00000418882 GCKRQ14397 625 aa3.45□□□□□ -1.86
HMGB1P49-201ENST00000418882 SPOUT1Q5T280 376 aaKnown RBP3.45□□□□□ -1.86
HMGB1P49-201ENST00000418882 LEMD1Q68G75 181 aa3.45□□□□□ -1.86
HMGB1P49-201ENST00000418882 SIGLEC15Q6ZMC9 328 aa3.45□□□□□ -1.86
HMGB1P49-201ENST00000418882 Q6ZR54 194 aa3.45□□□□□ -1.86
HMGB1P49-201ENST00000418882 SIX6OS1Q8N1H7 587 aa3.45□□□□□ -1.86
HMGB1P49-201ENST00000418882 C4orf32Q8N8J7 132 aa3.45□□□□□ -1.86
HMGB1P49-201ENST00000418882 GPATCH11Q8N954 259 aa3.45□□□□□ -1.86
HMGB1P49-201ENST00000418882 NHLRC2Q8NBF2 726 aa3.45□□□□□ -1.86
HMGB1P49-201ENST00000418882 KIAA0895Q8NCT3 520 aa3.45□□□□□ -1.86
HMGB1P49-201ENST00000418882 TYMSOSQ8TAI1 123 aa3.45□□□□□ -1.86
HMGB1P49-201ENST00000418882 GPR148Q8TDV2 347 aa3.45□□□□□ -1.86
HMGB1P49-201ENST00000418882 LIPHQ8WWY8 451 aa3.45□□□□□ -1.86
HMGB1P49-201ENST00000418882 FAM120CQ9NX05 1096 aaKnown RBP3.45□□□□□ -1.86
HMGB1P49-201ENST00000418882 GPR83Q9NYM4 423 aa3.45□□□□□ -1.86
HMGB1P49-201ENST00000418882 UBQLN2Q9UHD9 624 aa3.45□□□□□ -1.86
HMGB1P49-201ENST00000418882 SH3GLB1Q9Y371 365 aa3.45□□□□□ -1.86
HMGB1P49-201ENST00000418882 PFASO15067 1338 aa3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 KBTBD13C9JR72 458 aa3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 PDHXO00330 501 aa3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 INPP4BO15327 924 aa3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 ZNF354AO60765 605 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 SUPT20HL2P0C7V6 817 aa3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 KRT3P12035 628 aa3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 GP9P14770 177 aa3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 CCND3P30281 292 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 FCGR2BP31994 310 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 FCGR2CP31995 323 aa3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 C3AR1Q16581 482 aa3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 C15orf32Q32M92 178 aa3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 HIGD2BQ4VC39 106 aa3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 FAM182AQ5T1J6 154 aa3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 PLPP4Q5VZY2 271 aa3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 SEL1L3Q68CR1 1132 aa3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 FGFRL1Q8N441 504 aa3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 SUMF1Q8NBK3 374 aa3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 CSNK1G2-AS1Q8NCQ2 148 aa3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 ZNRF1Q8ND25 227 aa3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 DEPDC1BQ8WUY9 529 aa3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 TNFRSF13CQ96RJ3 184 aa3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 RASL10BQ96S79 203 aa3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 THUMPD3Q9BV44 507 aaKnown RBP3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 PINK1Q9BXM7 581 aa3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 NACAP1Q9BZK3 213 aa3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 MTIF3Q9H2K0 278 aaKnown RBP3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 KCNK13Q9HB14 408 aa3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 PLEKHA3Q9HB20 300 aa3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 SLCO1C1Q9NYB5 712 aa3.44□□□□□ -1.86
HMGB1P49-201ENST00000418882 LOC390937A0A1W2PQ73 354 aa3.43□□□□□ -1.86
HMGB1P49-201ENST00000418882 CCDC162PA2VCL2 907 aa3.43□□□□□ -1.86
HMGB1P49-201ENST00000418882 SCO2O43819 266 aa3.43□□□□□ -1.86
HMGB1P49-201ENST00000418882 HCKP08631 526 aa3.43□□□□□ -1.86
HMGB1P49-201ENST00000418882 SCG2P13521 617 aa3.43□□□□□ -1.86
HMGB1P49-201ENST00000418882 GLULP15104 373 aa3.43□□□□□ -1.86
HMGB1P49-201ENST00000418882 CASTP20810 708 aaKnown RBP3.43□□□□□ -1.86
HMGB1P49-201ENST00000418882 SLC1A3P43003 542 aa3.43□□□□□ -1.86
HMGB1P49-201ENST00000418882 NPBWR1P48145 328 aa3.43□□□□□ -1.86
HMGB1P49-201ENST00000418882 CRYBA2P53672 197 aa3.43□□□□□ -1.86
HMGB1P49-201ENST00000418882 RBP5P82980 135 aa3.43□□□□□ -1.86
HMGB1P49-201ENST00000418882 CETN1Q12798 172 aa3.43□□□□□ -1.86
HMGB1P49-201ENST00000418882 PTK6Q13882 451 aa3.43□□□□□ -1.86
HMGB1P49-201ENST00000418882 CEACAM7Q14002 265 aa3.43□□□□□ -1.86
HMGB1P49-201ENST00000418882 CCL14Q16627 93 aa3.43□□□□□ -1.86
HMGB1P49-201ENST00000418882 TWISTNBQ3B726 338 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P49-201ENST00000418882 IQCCQ4KMZ1 466 aa3.43□□□□□ -1.86
HMGB1P49-201ENST00000418882 ARMC3Q5W041 872 aa3.43□□□□□ -1.86
HMGB1P49-201ENST00000418882 CATSPER3Q86XQ3 398 aa3.43□□□□□ -1.86
HMGB1P49-201ENST00000418882 AQP12AQ8IXF9 295 aa3.43□□□□□ -1.86
HMGB1P49-201ENST00000418882 OR13C5Q8NGS8 318 aa3.43□□□□□ -1.86
HMGB1P49-201ENST00000418882 FAM162AQ96A26 154 aa3.43□□□□□ -1.86
HMGB1P49-201ENST00000418882 RFT1Q96AA3 541 aa3.43□□□□□ -1.86
HMGB1P49-201ENST00000418882 PARK7Q99497 189 aaKnown RBP3.43□□□□□ -1.86
HMGB1P49-201ENST00000418882 UBAC1Q9BSL1 405 aa3.43□□□□□ -1.86
HMGB1P49-201ENST00000418882 MOB1AQ9H8S9 216 aa3.43□□□□□ -1.86
HMGB1P49-201ENST00000418882 DEPPQ9NTK1 212 aa3.43□□□□□ -1.86
HMGB1P49-201ENST00000418882 PDRG1Q9NUG6 133 aa3.43□□□□□ -1.86
HMGB1P49-201ENST00000418882 TP53TG3Q9ULZ0 132 aa3.43□□□□□ -1.86
HMGB1P49-201ENST00000418882 A0A087WWV3 80 aa3.42□□□□□ -1.86
HMGB1P49-201ENST00000418882 IQCMA0A1B0GVH7 501 aa3.42□□□□□ -1.86
HMGB1P49-201ENST00000418882 A0A1W2PQ72 361 aa3.42□□□□□ -1.86
HMGB1P49-201ENST00000418882 TCP10L2B9ZVM9 353 aa3.42□□□□□ -1.86
HMGB1P49-201ENST00000418882 PHOX2AO14813 284 aa3.42□□□□□ -1.86
HMGB1P49-201ENST00000418882 OGTO15294 1046 aa3.42□□□□□ -1.86
HMGB1P49-201ENST00000418882 TXNL1O43396 289 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms