RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 BEST3Q8N1M1 668 aa15.44■□□□□ 0.06
LINC00404-201ENST00000418660 TEX9Q8N6V9 391 aa15.44■□□□□ 0.06
LINC00404-201ENST00000418660 BCORP1Q8N888 145 aa15.44■□□□□ 0.06
LINC00404-201ENST00000418660 SRFBP1Q8NEF9 429 aaKnown RBP15.44■□□□□ 0.06
LINC00404-201ENST00000418660 ELP5Q8TE02 316 aa15.44■□□□□ 0.06
LINC00404-201ENST00000418660 ZNF473Q8WTR7 871 aaKnown RBP15.44■□□□□ 0.06
LINC00404-201ENST00000418660 ISL2Q96A47 359 aa15.44■□□□□ 0.06
LINC00404-201ENST00000418660 PSMG3-AS1Q96PY0 264 aa15.44■□□□□ 0.06
LINC00404-201ENST00000418660 F2RL3Q96RI0 385 aa15.44■□□□□ 0.06
LINC00404-201ENST00000418660 PAFAH2Q99487 392 aa15.44■□□□□ 0.06
LINC00404-201ENST00000418660 MS4A8Q9BY19 250 aa15.44■□□□□ 0.06
LINC00404-201ENST00000418660 ROGDIQ9GZN7 287 aa15.44■□□□□ 0.06
LINC00404-201ENST00000418660 COPS7BQ9H9Q2 264 aaPredicted RBP15.44■□□□□ 0.06
LINC00404-201ENST00000418660 PRDM7Q9NQW5 492 aa15.44■□□□□ 0.06
LINC00404-201ENST00000418660 PRTFDC1Q9NRG1 225 aa15.44■□□□□ 0.06
LINC00404-201ENST00000418660 ANGPTL3Q9Y5C1 460 aa15.44■□□□□ 0.06
LINC00404-201ENST00000418660 CPAMD8Q8IZJ3 1885 aa15.44■□□□□ 0.06
LINC00404-201ENST00000418660 BLACEA4D250 179 aa15.43■□□□□ 0.06
LINC00404-201ENST00000418660 SAGE2PA6NJ88 616 aa15.43■□□□□ 0.06
LINC00404-201ENST00000418660 E2F3O00716 465 aa15.43■□□□□ 0.06
LINC00404-201ENST00000418660 PRAMEF2O60811 474 aa15.43■□□□□ 0.06
LINC00404-201ENST00000418660 KRT38O76015 456 aa15.43■□□□□ 0.06
LINC00404-201ENST00000418660 MAGEA12P43365 314 aa15.43■□□□□ 0.06
LINC00404-201ENST00000418660 LIM2P55344 173 aa15.43■□□□□ 0.06
LINC00404-201ENST00000418660 HSD17B7P56937 341 aa15.43■□□□□ 0.06
LINC00404-201ENST00000418660 RCN2Q14257 317 aa15.43■□□□□ 0.06
LINC00404-201ENST00000418660 PCBP2Q15366 365 aaKnown RBP eCLIP15.43■□□□□ 0.06
LINC00404-201ENST00000418660 TMEM35AQ53FP2 167 aa15.43■□□□□ 0.06
LINC00404-201ENST00000418660 GRHL2Q6ISB3 625 aa15.43■□□□□ 0.06
LINC00404-201ENST00000418660 SCUBE1Q8IWY4 988 aa15.43■□□□□ 0.06
LINC00404-201ENST00000418660 ZNF595Q8IYB9 648 aa15.43■□□□□ 0.06
LINC00404-201ENST00000418660 PLD6Q8N2A8 252 aaKnown RBP15.43■□□□□ 0.06
LINC00404-201ENST00000418660 NFAM1Q8NET5 270 aaPredicted RBP15.43■□□□□ 0.06
LINC00404-201ENST00000418660 OR7G3Q8NG95 312 aa15.43■□□□□ 0.06
LINC00404-201ENST00000418660 SSC4DQ8WTU2 575 aa15.43■□□□□ 0.06
LINC00404-201ENST00000418660 TRIM44Q96DX7 344 aaPredicted RBP15.43■□□□□ 0.06
LINC00404-201ENST00000418660 KCNC2Q96PR1 638 aa15.43■□□□□ 0.06
LINC00404-201ENST00000418660 NPAS2Q99743 824 aa15.43■□□□□ 0.06
LINC00404-201ENST00000418660 TBCDQ9BTW9 1192 aa15.43■□□□□ 0.06
LINC00404-201ENST00000418660 ADGRE2Q9UHX3 823 aa15.43■□□□□ 0.06
LINC00404-201ENST00000418660 ZNF180Q9UJW8 692 aa15.43■□□□□ 0.06
LINC00404-201ENST00000418660 DAPP1Q9UN19 280 aa15.43■□□□□ 0.06
LINC00404-201ENST00000418660 MRPS33Q9Y291 106 aaKnown RBP15.43■□□□□ 0.06
LINC00404-201ENST00000418660 TNPO3Q9Y5L0 923 aaKnown RBP15.43■□□□□ 0.06
LINC00404-201ENST00000418660 A0A087WUV0 522 aaPredicted RBP15.42■□□□□ 0.06
LINC00404-201ENST00000418660 POC1B-GALNT4F8VUJ3 575 aa15.42■□□□□ 0.06
LINC00404-201ENST00000418660 CDK2AP1O14519 115 aa15.42■□□□□ 0.06
LINC00404-201ENST00000418660 PCNAP12004 261 aa15.42■□□□□ 0.06
LINC00404-201ENST00000418660 CNTFP26441 200 aa15.42■□□□□ 0.06
LINC00404-201ENST00000418660 CERS1P27544 350 aa15.42■□□□□ 0.06
LINC00404-201ENST00000418660 HNRNPFP52597 415 aaKnown RBP15.42■□□□□ 0.06
LINC00404-201ENST00000418660 TUBA3CQ13748 450 aa15.42■□□□□ 0.06
LINC00404-201ENST00000418660 TECRLQ5HYJ1 363 aa15.42■□□□□ 0.06
LINC00404-201ENST00000418660 ZNF324BQ6AW86 544 aaPredicted RBP15.42■□□□□ 0.06
LINC00404-201ENST00000418660 METTL2BQ6P1Q9 378 aaKnown RBP15.42■□□□□ 0.06
LINC00404-201ENST00000418660 TUBA3EQ6PEY2 450 aa15.42■□□□□ 0.06
LINC00404-201ENST00000418660 CHSY3Q70JA7 882 aa15.42■□□□□ 0.06
LINC00404-201ENST00000418660 UBE3DQ7Z6J8 389 aa15.42■□□□□ 0.06
LINC00404-201ENST00000418660 RPS19BP1Q86WX3 136 aaKnown RBP15.42■□□□□ 0.06
LINC00404-201ENST00000418660 IFT20Q8IY31 132 aa15.42■□□□□ 0.06
LINC00404-201ENST00000418660 KIF2BQ8N4N8 673 aa15.42■□□□□ 0.06
LINC00404-201ENST00000418660 TMEM52Q8NDY8 209 aa15.42■□□□□ 0.06
LINC00404-201ENST00000418660 CMTM7Q96FZ5 175 aa15.42■□□□□ 0.06
LINC00404-201ENST00000418660 TAAR6Q96RI8 345 aa15.42■□□□□ 0.06
LINC00404-201ENST00000418660 SLX1AQ9BQ83 275 aa15.42■□□□□ 0.06
LINC00404-201ENST00000418660 UTP23Q9BRU9 249 aaKnown RBP15.42■□□□□ 0.06
LINC00404-201ENST00000418660 CDCP1Q9H5V8 836 aa15.42■□□□□ 0.06
LINC00404-201ENST00000418660 OLAHQ9NV23 265 aa15.42■□□□□ 0.06
LINC00404-201ENST00000418660 ZNF358Q9NW07 568 aa15.42■□□□□ 0.06
LINC00404-201ENST00000418660 CPSF2Q9P2I0 782 aaKnown RBP15.42■□□□□ 0.06
LINC00404-201ENST00000418660 NFU1Q9UMS0 254 aa15.42■□□□□ 0.06
LINC00404-201ENST00000418660 PCDHGB6Q9Y5F9 930 aa15.42■□□□□ 0.06
LINC00404-201ENST00000418660 HECTD1Q9ULT8 2610 aa15.42■□□□□ 0.06
LINC00404-201ENST00000418660 SYNDIG1LA6NDD5 238 aa15.41■□□□□ 0.06
LINC00404-201ENST00000418660 A8MUA0 341 aa15.41■□□□□ 0.06
LINC00404-201ENST00000418660 CYR61O00622 381 aa15.41■□□□□ 0.06
LINC00404-201ENST00000418660 MAN1A2O60476 641 aa15.41■□□□□ 0.06
LINC00404-201ENST00000418660 RASAL1O95294 804 aa15.41■□□□□ 0.06
LINC00404-201ENST00000418660 DDAH2O95865 285 aa15.41■□□□□ 0.06
LINC00404-201ENST00000418660 TGFB1P01137 390 aa15.41■□□□□ 0.06
LINC00404-201ENST00000418660 RBP1P09455 135 aa15.41■□□□□ 0.06
LINC00404-201ENST00000418660 COL6A2P12110 1019 aa15.41■□□□□ 0.06
LINC00404-201ENST00000418660 ATP5A1P25705 553 aaKnown RBP15.41■□□□□ 0.06
LINC00404-201ENST00000418660 CD96P40200 585 aa15.41■□□□□ 0.06
LINC00404-201ENST00000418660 PIK3CGP48736 1102 aa15.41■□□□□ 0.06
LINC00404-201ENST00000418660 SLC13A2Q13183 592 aa15.41■□□□□ 0.06
LINC00404-201ENST00000418660 TERF2Q15554 542 aa15.41■□□□□ 0.06
LINC00404-201ENST00000418660 ZNF766Q5HY98 468 aa15.41■□□□□ 0.06
LINC00404-201ENST00000418660 LIPJQ5W064 366 aa15.41■□□□□ 0.06
LINC00404-201ENST00000418660 FAM47BQ8NA70 645 aa15.41■□□□□ 0.06
LINC00404-201ENST00000418660 B3GNT7Q8NFL0 401 aa15.41■□□□□ 0.06
LINC00404-201ENST00000418660 DNAJB8Q8NHS0 232 aa15.41■□□□□ 0.06
LINC00404-201ENST00000418660 UHMK1Q8TAS1 419 aaKnown RBP15.41■□□□□ 0.06
LINC00404-201ENST00000418660 DCAKDQ8WVC6 231 aa15.41■□□□□ 0.06
LINC00404-201ENST00000418660 ACTR8Q9H981 624 aa15.41■□□□□ 0.06
LINC00404-201ENST00000418660 LYRM4Q9HD34 91 aa15.41■□□□□ 0.06
LINC00404-201ENST00000418660 PRM3Q9NNZ6 103 aa15.41■□□□□ 0.06
LINC00404-201ENST00000418660 KCMF1Q9P0J7 381 aa15.41■□□□□ 0.06
LINC00404-201ENST00000418660 TMCO1Q9UM00 188 aa15.41■□□□□ 0.06
LINC00404-201ENST00000418660 SLC5A6Q9Y289 635 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms