RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 COX6B1P14854 86 aa13.2□□□□□ -0.3
LINC01006-202ENST00000418309 HNRNPH1P31943 449 aaKnown RBP13.2□□□□□ -0.3
LINC01006-202ENST00000418309 HPDP32754 393 aaPredicted RBP13.2□□□□□ -0.3
LINC01006-202ENST00000418309 HSPA7P48741 367 aa13.2□□□□□ -0.3
LINC01006-202ENST00000418309 RAB38P57729 211 aa13.2□□□□□ -0.3
LINC01006-202ENST00000418309 ADORA2A-AS1P86434 159 aa13.2□□□□□ -0.3
LINC01006-202ENST00000418309 HSF1Q00613 529 aa13.2□□□□□ -0.3
LINC01006-202ENST00000418309 TRIM40Q6P9F5 258 aa13.2□□□□□ -0.3
LINC01006-202ENST00000418309 Q6ZPB1 254 aaPredicted RBP13.2□□□□□ -0.3
LINC01006-202ENST00000418309 SIAH3Q8IW03 269 aa13.2□□□□□ -0.3
LINC01006-202ENST00000418309 FAM47BQ8NA70 645 aa13.2□□□□□ -0.3
LINC01006-202ENST00000418309 ADAMTS18Q8TE60 1221 aa13.2□□□□□ -0.3
LINC01006-202ENST00000418309 ESAMQ96AP7 390 aa13.2□□□□□ -0.3
LINC01006-202ENST00000418309 CCDC77Q9BR77 488 aa13.2□□□□□ -0.3
LINC01006-202ENST00000418309 REXO4Q9GZR2 422 aaKnown RBP13.2□□□□□ -0.3
LINC01006-202ENST00000418309 NT5DC2Q9H857 520 aa13.2□□□□□ -0.3
LINC01006-202ENST00000418309 COPS7BQ9H9Q2 264 aaPredicted RBP13.2□□□□□ -0.3
LINC01006-202ENST00000418309 GPRC5BQ9NZH0 403 aa13.2□□□□□ -0.3
LINC01006-202ENST00000418309 CD274Q9NZQ7 290 aa13.2□□□□□ -0.3
LINC01006-202ENST00000418309 MRPS33Q9Y291 106 aaKnown RBP13.2□□□□□ -0.3
LINC01006-202ENST00000418309 KLF13Q9Y2Y9 288 aaPredicted RBP13.2□□□□□ -0.3
LINC01006-202ENST00000418309 MEMO1Q9Y316 297 aa13.2□□□□□ -0.3
LINC01006-202ENST00000418309 CXorf49A8MYA2 514 aaPredicted RBP13.19□□□□□ -0.3
LINC01006-202ENST00000418309 TFECO14948 347 aaPredicted RBP13.19□□□□□ -0.3
LINC01006-202ENST00000418309 TAPBPO15533 448 aa13.19□□□□□ -0.3
LINC01006-202ENST00000418309 ITGA10O75578 1167 aa13.19□□□□□ -0.3
LINC01006-202ENST00000418309 CLEC3AO75596 197 aa13.19□□□□□ -0.3
LINC01006-202ENST00000418309 STK16O75716 305 aa13.19□□□□□ -0.3
LINC01006-202ENST00000418309 S100BP04271 92 aaPredicted RBP13.19□□□□□ -0.3
LINC01006-202ENST00000418309 IFNA16P05015 189 aa13.19□□□□□ -0.3
LINC01006-202ENST00000418309 STMN1P16949 149 aa13.19□□□□□ -0.3
LINC01006-202ENST00000418309 GSTM2P28161 218 aa13.19□□□□□ -0.3
LINC01006-202ENST00000418309 TRHRP34981 398 aaPredicted RBP13.19□□□□□ -0.3
LINC01006-202ENST00000418309 MEOX1P50221 254 aa13.19□□□□□ -0.3
LINC01006-202ENST00000418309 HSD17B7P56937 341 aa13.19□□□□□ -0.3
LINC01006-202ENST00000418309 XKR6Q5GH73 641 aa13.19□□□□□ -0.3
LINC01006-202ENST00000418309 RNFT1Q5M7Z0 435 aa13.19□□□□□ -0.3
LINC01006-202ENST00000418309 SULT1C3Q6IMI6 304 aa13.19□□□□□ -0.3
LINC01006-202ENST00000418309 CLNKQ7Z7G1 428 aa13.19□□□□□ -0.3
LINC01006-202ENST00000418309 ZNF227Q86WZ6 799 aa13.19□□□□□ -0.3
LINC01006-202ENST00000418309 SULF2Q8IWU5 870 aa13.19□□□□□ -0.3
LINC01006-202ENST00000418309 CYP4Z2PQ8N1L4 340 aa13.19□□□□□ -0.3
LINC01006-202ENST00000418309 APCDD1LQ8NCL9 501 aa13.19□□□□□ -0.3
LINC01006-202ENST00000418309 OR2L5Q8NG80 312 aa13.19□□□□□ -0.3
LINC01006-202ENST00000418309 AGAP11Q8TF27 550 aa13.19□□□□□ -0.3
LINC01006-202ENST00000418309 ANP32BQ92688 251 aaKnown RBP13.19□□□□□ -0.3
LINC01006-202ENST00000418309 EXT2Q93063 718 aa13.19□□□□□ -0.3
LINC01006-202ENST00000418309 NCLNQ969V3 563 aa13.19□□□□□ -0.3
LINC01006-202ENST00000418309 VMP1Q96GC9 406 aa13.19□□□□□ -0.3
LINC01006-202ENST00000418309 CPNE1Q99829 537 aa13.19□□□□□ -0.3
LINC01006-202ENST00000418309 TMEM79Q9BSE2 394 aa13.19□□□□□ -0.3
LINC01006-202ENST00000418309 MCMBPQ9BTE3 642 aa13.19□□□□□ -0.3
LINC01006-202ENST00000418309 PITHD1Q9GZP4 211 aaPredicted RBP13.19□□□□□ -0.3
LINC01006-202ENST00000418309 TRIM45Q9H8W5 580 aaPredicted RBP13.19□□□□□ -0.3
LINC01006-202ENST00000418309 PRRG2O14669 202 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 PEX1O43933 1283 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 CDC40O60508 579 aaKnown RBP eCLIP13.18□□□□□ -0.3
LINC01006-202ENST00000418309 CCNT2O60583 730 aaKnown RBP13.18□□□□□ -0.3
LINC01006-202ENST00000418309 ZFAND5O76080 213 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 CD1DP15813 335 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 AGAP20933 346 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 PPP2R1BP30154 601 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 GGT5P36269 586 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 RFC3P40938 356 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 HNRNPFP52597 415 aaKnown RBP13.18□□□□□ -0.3
LINC01006-202ENST00000418309 MTTPP55157 894 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 ATP6V0D1P61421 351 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 TGM3Q08188 693 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 BMPR2Q13873 1038 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 DOC2AQ14183 400 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 RCN2Q14257 317 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 TERF2Q15554 542 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 OR4D1Q15615 310 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 HIST2H2ACQ16777 129 aaPredicted RBP13.18□□□□□ -0.3
LINC01006-202ENST00000418309 HIST2H2AA3Q6FI13 130 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 C3P1Q6ZMU1 363 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 C3orf62Q6ZUJ4 267 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 MAATS1Q7Z4T9 603 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 SCUBE1Q8IWY4 988 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 CTAGE3PQ8IX95 158 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 ZNF595Q8IYB9 648 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 POGLUT1Q8NBL1 392 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 TMEM52Q8NDY8 209 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 PTCD3Q96EY7 689 aaKnown RBP13.18□□□□□ -0.3
LINC01006-202ENST00000418309 SEC16BQ96JE7 1060 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 QRFPRQ96P65 431 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 SERINC2Q96SA4 455 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 RBBP8Q99708 897 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 ERP44Q9BS26 406 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 WHRNQ9P202 907 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 ZNF490Q9ULM2 529 aaPredicted RBP13.18□□□□□ -0.3
LINC01006-202ENST00000418309 RNF112Q9ULX5 631 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 ERVK-11Q9UQG0 969 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 CLCA3PQ9Y6N3 262 aa13.18□□□□□ -0.3
LINC01006-202ENST00000418309 MYOCOSA0A1B0GUC4 107 aa13.17□□□□□ -0.3
LINC01006-202ENST00000418309 FAM187AA6NFU0 413 aa13.17□□□□□ -0.3
LINC01006-202ENST00000418309 TGFBR3LH3BV60 316 aa13.17□□□□□ -0.3
LINC01006-202ENST00000418309 EIF3HO15372 352 aaKnown RBP eCLIP13.17□□□□□ -0.3
LINC01006-202ENST00000418309 WISP3O95389 354 aaPredicted RBP13.17□□□□□ -0.3
LINC01006-202ENST00000418309 CLDN14O95500 239 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms