RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 GSTM2P28161 218 aa20.33■□□□□ 0.85
ACTB-203ENST00000417101 RFC3P40938 356 aa20.33■□□□□ 0.85
ACTB-203ENST00000417101 MEOX1P50221 254 aa20.33■□□□□ 0.85
ACTB-203ENST00000417101 PLA2G16P53816 162 aa20.33■□□□□ 0.85
ACTB-203ENST00000417101 RAB38P57729 211 aa20.33■□□□□ 0.85
ACTB-203ENST00000417101 SLC13A2Q13183 592 aa20.33■□□□□ 0.85
ACTB-203ENST00000417101 CDSNQ15517 529 aa20.33■□□□□ 0.85
ACTB-203ENST00000417101 TERF2Q15554 542 aa20.33■□□□□ 0.85
ACTB-203ENST00000417101 C3P1Q6ZMU1 363 aa20.33■□□□□ 0.85
ACTB-203ENST00000417101 DOLPP1Q86YN1 238 aa20.33■□□□□ 0.85
ACTB-203ENST00000417101 GPSM1Q86YR5 675 aa20.33■□□□□ 0.85
ACTB-203ENST00000417101 CYP4Z2PQ8N1L4 340 aa20.33■□□□□ 0.85
ACTB-203ENST00000417101 TMEM156Q8N614 296 aa20.33■□□□□ 0.85
ACTB-203ENST00000417101 FAM47BQ8NA70 645 aa20.33■□□□□ 0.85
ACTB-203ENST00000417101 PYROXD1Q8WU10 500 aa20.33■□□□□ 0.85
ACTB-203ENST00000417101 QRFPRQ96P65 431 aa20.33■□□□□ 0.85
ACTB-203ENST00000417101 PHF12Q96QT6 1004 aa20.33■□□□□ 0.85
ACTB-203ENST00000417101 TMEM79Q9BSE2 394 aa20.33■□□□□ 0.85
ACTB-203ENST00000417101 NT5DC2Q9H857 520 aa20.33■□□□□ 0.85
ACTB-203ENST00000417101 DNAJC11Q9NVH1 559 aa20.33■□□□□ 0.85
ACTB-203ENST00000417101 GPRC5BQ9NZH0 403 aa20.33■□□□□ 0.85
ACTB-203ENST00000417101 ZNF223Q9UK11 482 aaPredicted RBP20.33■□□□□ 0.85
ACTB-203ENST00000417101 KLF13Q9Y2Y9 288 aaPredicted RBP20.33■□□□□ 0.85
ACTB-203ENST00000417101 PDZD2O15018 2839 aa20.32■□□□□ 0.84
ACTB-203ENST00000417101 NCOA6Q14686 2063 aaPredicted RBP20.32■□□□□ 0.84
ACTB-203ENST00000417101 A0A088AWK7 358 aa20.32■□□□□ 0.84
ACTB-203ENST00000417101 CXorf49A8MYA2 514 aaPredicted RBP20.32■□□□□ 0.84
ACTB-203ENST00000417101 CLDN4O14493 209 aa20.32■□□□□ 0.84
ACTB-203ENST00000417101 TFECO14948 347 aaPredicted RBP20.32■□□□□ 0.84
ACTB-203ENST00000417101 PHGDHO43175 533 aaKnown RBP20.32■□□□□ 0.84
ACTB-203ENST00000417101 ITGA10O75578 1167 aa20.32■□□□□ 0.84
ACTB-203ENST00000417101 TBX6O95947 436 aaPredicted RBP20.32■□□□□ 0.84
ACTB-203ENST00000417101 CCDC166P0CW27 439 aa20.32■□□□□ 0.84
ACTB-203ENST00000417101 ZNF10P21506 573 aaPredicted RBP20.32■□□□□ 0.84
ACTB-203ENST00000417101 SSTR1P30872 391 aa20.32■□□□□ 0.84
ACTB-203ENST00000417101 PTGER1P34995 402 aa20.32■□□□□ 0.84
ACTB-203ENST00000417101 HSPA7P48741 367 aa20.32■□□□□ 0.84
ACTB-203ENST00000417101 HSD17B7P56937 341 aa20.32■□□□□ 0.84
ACTB-203ENST00000417101 CBLBQ13191 982 aa20.32■□□□□ 0.84
ACTB-203ENST00000417101 ADNP2Q6IQ32 1131 aa20.32■□□□□ 0.84
ACTB-203ENST00000417101 VN1R5Q7Z5H4 357 aa20.32■□□□□ 0.84
ACTB-203ENST00000417101 FGD2Q7Z6J4 655 aa20.32■□□□□ 0.84
ACTB-203ENST00000417101 SULF2Q8IWU5 870 aa20.32■□□□□ 0.84
ACTB-203ENST00000417101 TCAIMQ8N3R3 496 aa20.32■□□□□ 0.84
ACTB-203ENST00000417101 POGLUT1Q8NBL1 392 aa20.32■□□□□ 0.84
ACTB-203ENST00000417101 OR2L5Q8NG80 312 aa20.32■□□□□ 0.84
ACTB-203ENST00000417101 NCLNQ969V3 563 aa20.32■□□□□ 0.84
ACTB-203ENST00000417101 ESAMQ96AP7 390 aa20.32■□□□□ 0.84
ACTB-203ENST00000417101 MTFMTQ96DP5 389 aaKnown RBP20.32■□□□□ 0.84
ACTB-203ENST00000417101 TSPAN17Q96FV3 270 aa20.32■□□□□ 0.84
ACTB-203ENST00000417101 VMP1Q96GC9 406 aa20.32■□□□□ 0.84
ACTB-203ENST00000417101 SEC16BQ96JE7 1060 aa20.32■□□□□ 0.84
ACTB-203ENST00000417101 PITHD1Q9GZP4 211 aaPredicted RBP20.32■□□□□ 0.84
ACTB-203ENST00000417101 REXO4Q9GZR2 422 aaKnown RBP20.32■□□□□ 0.84
ACTB-203ENST00000417101 CNOT10Q9H9A5 744 aaKnown RBP20.32■□□□□ 0.84
ACTB-203ENST00000417101 TXNDC16Q9P2K2 825 aa20.32■□□□□ 0.84
ACTB-203ENST00000417101 MRPS33Q9Y291 106 aaKnown RBP20.32■□□□□ 0.84
ACTB-203ENST00000417101 ASB1Q9Y576 335 aa20.32■□□□□ 0.84
ACTB-203ENST00000417101 CLDN16Q9Y5I7 305 aa20.32■□□□□ 0.84
ACTB-203ENST00000417101 GTF3C1Q12789 2109 aa20.32■□□□□ 0.84
ACTB-203ENST00000417101 PRRG2O14669 202 aa20.31■□□□□ 0.84
ACTB-203ENST00000417101 CLGNO14967 610 aa20.31■□□□□ 0.84
ACTB-203ENST00000417101 PEX1O43933 1283 aa20.31■□□□□ 0.84
ACTB-203ENST00000417101 PRAMEF4O60810 478 aa20.31■□□□□ 0.84
ACTB-203ENST00000417101 CLDN14O95500 239 aa20.31■□□□□ 0.84
ACTB-203ENST00000417101 ELAVL4P26378 380 aaKnown RBP20.31■□□□□ 0.84
ACTB-203ENST00000417101 CERS1P27544 350 aa20.31■□□□□ 0.84
ACTB-203ENST00000417101 GGT5P36269 586 aa20.31■□□□□ 0.84
ACTB-203ENST00000417101 ILF2Q12905 390 aaKnown RBP20.31■□□□□ 0.84
ACTB-203ENST00000417101 OR4D1Q15615 310 aa20.31■□□□□ 0.84
ACTB-203ENST00000417101 ADPRMQ3LIE5 342 aa20.31■□□□□ 0.84
ACTB-203ENST00000417101 PRAMEF9Q5VWM5 478 aa20.31■□□□□ 0.84
ACTB-203ENST00000417101 TRIM40Q6P9F5 258 aa20.31■□□□□ 0.84
ACTB-203ENST00000417101 MDGA2Q7Z553 956 aa20.31■□□□□ 0.84
ACTB-203ENST00000417101 CLNKQ7Z7G1 428 aa20.31■□□□□ 0.84
ACTB-203ENST00000417101 ZNF595Q8IYB9 648 aa20.31■□□□□ 0.84
ACTB-203ENST00000417101 SNX31Q8N9S9 440 aa20.31■□□□□ 0.84
ACTB-203ENST00000417101 CDKL2Q92772 493 aa20.31■□□□□ 0.84
ACTB-203ENST00000417101 CCDC77Q9BR77 488 aa20.31■□□□□ 0.84
ACTB-203ENST00000417101 DPH5Q9H2P9 285 aa20.31■□□□□ 0.84
ACTB-203ENST00000417101 EHD1Q9H4M9 534 aa20.31■□□□□ 0.84
ACTB-203ENST00000417101 SAYSD1Q9NPB0 183 aa20.31■□□□□ 0.84
ACTB-203ENST00000417101 ZNF490Q9ULM2 529 aaPredicted RBP20.31■□□□□ 0.84
ACTB-203ENST00000417101 PPIEQ9UNP9 301 aaKnown RBP20.31■□□□□ 0.84
ACTB-203ENST00000417101 TEP1Q99973 2627 aaKnown RBP20.3■□□□□ 0.84
ACTB-203ENST00000417101 E9PLN8 166 aa20.3■□□□□ 0.84
ACTB-203ENST00000417101 KLRC4-KLRK1H3BQV0 150 aa20.3■□□□□ 0.84
ACTB-203ENST00000417101 C19orf84I3L1E1 186 aa20.3■□□□□ 0.84
ACTB-203ENST00000417101 STK16O75716 305 aa20.3■□□□□ 0.84
ACTB-203ENST00000417101 CD1DP15813 335 aa20.3■□□□□ 0.84
ACTB-203ENST00000417101 HPDP32754 393 aaPredicted RBP20.3■□□□□ 0.84
ACTB-203ENST00000417101 GPR143P51810 404 aa20.3■□□□□ 0.84
ACTB-203ENST00000417101 LIM2P55344 173 aa20.3■□□□□ 0.84
ACTB-203ENST00000417101 DOC2AQ14183 400 aa20.3■□□□□ 0.84
ACTB-203ENST00000417101 XKR6Q5GH73 641 aa20.3■□□□□ 0.84
ACTB-203ENST00000417101 SULT1C3Q6IMI6 304 aa20.3■□□□□ 0.84
ACTB-203ENST00000417101 ABHD17CQ6PCB6 329 aa20.3■□□□□ 0.84
ACTB-203ENST00000417101 C16orf47Q6ZP98 133 aaPredicted RBP20.3■□□□□ 0.84
ACTB-203ENST00000417101 BBOF1Q8ND07 529 aa20.3■□□□□ 0.84
ACTB-203ENST00000417101 SERINC2Q96SA4 455 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms