RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 MAPKAPK3Q16644 382 aa12.4□□□□□ -0.42
CTHRC1-202ENST00000415886 PPP1R3AQ16821 1122 aa12.4□□□□□ -0.42
CTHRC1-202ENST00000415886 GLE1Q53GS7 698 aaKnown RBP12.4□□□□□ -0.42
CTHRC1-202ENST00000415886 ZNF468Q5VIY5 522 aaPredicted RBP12.4□□□□□ -0.42
CTHRC1-202ENST00000415886 SULT1C3Q6IMI6 304 aa12.4□□□□□ -0.42
CTHRC1-202ENST00000415886 SLC25A25Q6KCM7 469 aa12.4□□□□□ -0.42
CTHRC1-202ENST00000415886 PAPD4Q6PIY7 484 aaKnown RBP12.4□□□□□ -0.42
CTHRC1-202ENST00000415886 ZDHHC24Q6UX98 284 aa12.4□□□□□ -0.42
CTHRC1-202ENST00000415886 ABHD13Q7L211 337 aa12.4□□□□□ -0.42
CTHRC1-202ENST00000415886 VN1R4Q7Z5H5 301 aa12.4□□□□□ -0.42
CTHRC1-202ENST00000415886 TMPRSS11BQ86T26 416 aa12.4□□□□□ -0.42
CTHRC1-202ENST00000415886 MMGT1Q8N4V1 131 aa12.4□□□□□ -0.42
CTHRC1-202ENST00000415886 KCT2Q8NC54 265 aa12.4□□□□□ -0.42
CTHRC1-202ENST00000415886 STAG3L4Q8TBR4 150 aa12.4□□□□□ -0.42
CTHRC1-202ENST00000415886 M1APQ8TC57 530 aa12.4□□□□□ -0.42
CTHRC1-202ENST00000415886 OR4K3Q96R72 315 aa12.4□□□□□ -0.42
CTHRC1-202ENST00000415886 GPR22Q99680 433 aa12.4□□□□□ -0.42
CTHRC1-202ENST00000415886 RBCK1Q9BYM8 510 aa12.4□□□□□ -0.42
CTHRC1-202ENST00000415886 PELI2Q9HAT8 420 aa12.4□□□□□ -0.42
CTHRC1-202ENST00000415886 NMRAL1Q9HBL8 299 aa12.4□□□□□ -0.42
CTHRC1-202ENST00000415886 NPDC1Q9NQX5 325 aaPredicted RBP12.4□□□□□ -0.42
CTHRC1-202ENST00000415886 WWOXQ9NZC7 414 aa12.4□□□□□ -0.42
CTHRC1-202ENST00000415886 COQ3Q9NZJ6 369 aa12.4□□□□□ -0.42
CTHRC1-202ENST00000415886 LRFN1Q9P244 771 aa12.4□□□□□ -0.42
CTHRC1-202ENST00000415886 ZFP69BQ9UJL9 534 aa12.4□□□□□ -0.42
CTHRC1-202ENST00000415886 RNF112Q9ULX5 631 aa12.4□□□□□ -0.42
CTHRC1-202ENST00000415886 ACOT9Q9Y305 439 aa12.4□□□□□ -0.42
CTHRC1-202ENST00000415886 IKBKGQ9Y6K9 419 aa12.4□□□□□ -0.42
CTHRC1-202ENST00000415886 SLC25A12O75746 678 aa12.39□□□□□ -0.43
CTHRC1-202ENST00000415886 CDC123O75794 336 aaPredicted RBP12.39□□□□□ -0.43
CTHRC1-202ENST00000415886 FAM155BO75949 473 aa12.39□□□□□ -0.43
CTHRC1-202ENST00000415886 C1GALT1C1LP0DN25 315 aa12.39□□□□□ -0.43
CTHRC1-202ENST00000415886 CD1DP15813 335 aa12.39□□□□□ -0.43
CTHRC1-202ENST00000415886 HOXB4P17483 251 aaPredicted RBP12.39□□□□□ -0.43
CTHRC1-202ENST00000415886 IL10P22301 178 aa12.39□□□□□ -0.43
CTHRC1-202ENST00000415886 AHRP35869 848 aa12.39□□□□□ -0.43
CTHRC1-202ENST00000415886 GDF5P43026 501 aa12.39□□□□□ -0.43
CTHRC1-202ENST00000415886 ACTN3Q08043 901 aaPredicted RBP12.39□□□□□ -0.43
CTHRC1-202ENST00000415886 SFT2D3Q587I9 215 aa12.39□□□□□ -0.43
CTHRC1-202ENST00000415886 CDKL4Q5MAI5 379 aa12.39□□□□□ -0.43
CTHRC1-202ENST00000415886 EID3Q8N140 333 aa12.39□□□□□ -0.43
CTHRC1-202ENST00000415886 KRT78Q8N1N4 520 aa12.39□□□□□ -0.43
CTHRC1-202ENST00000415886 MARVELD2Q8N4S9 558 aa12.39□□□□□ -0.43
CTHRC1-202ENST00000415886 SLC5A8Q8N695 610 aa12.39□□□□□ -0.43
CTHRC1-202ENST00000415886 HORMAD2Q8N7B1 307 aa12.39□□□□□ -0.43
CTHRC1-202ENST00000415886 CEP112Q8N8E3 955 aa12.39□□□□□ -0.43
CTHRC1-202ENST00000415886 SNX31Q8N9S9 440 aa12.39□□□□□ -0.43
CTHRC1-202ENST00000415886 CCT6BQ92526 530 aa12.39□□□□□ -0.43
CTHRC1-202ENST00000415886 NRGNQ92686 78 aa12.39□□□□□ -0.43
CTHRC1-202ENST00000415886 TSLPQ969D9 159 aa12.39□□□□□ -0.43
CTHRC1-202ENST00000415886 RHBDF1Q96CC6 855 aa12.39□□□□□ -0.43
CTHRC1-202ENST00000415886 FAR2Q96K12 515 aa12.39□□□□□ -0.43
CTHRC1-202ENST00000415886 MCMBPQ9BTE3 642 aa12.39□□□□□ -0.43
CTHRC1-202ENST00000415886 CDCP1Q9H5V8 836 aa12.39□□□□□ -0.43
CTHRC1-202ENST00000415886 TNFRSF10DQ9UBN6 386 aa12.39□□□□□ -0.43
CTHRC1-202ENST00000415886 NAALAD2Q9Y3Q0 740 aa12.39□□□□□ -0.43
CTHRC1-202ENST00000415886 HEATR5BQ9P2D3 2071 aa12.39□□□□□ -0.43
CTHRC1-202ENST00000415886 SETD2Q9BYW2 2564 aaPredicted RBP12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 NKX2-6A6NCS4 301 aa12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 FAM90A27PA6NNH2 459 aa12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 PSMD12O00232 456 aaPredicted RBP12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 NME2P1O60361 137 aa12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 RDH16O75452 317 aa12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 STK16O75716 305 aa12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 TPOP07202 933 aa12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 CD99P14209 185 aa12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 ALOX12P18054 663 aa12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 NME2P22392 152 aa12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 HPDP32754 393 aaPredicted RBP12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 HNF4AP41235 474 aa12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 SCTRP47872 440 aa12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 RHAGQ02094 409 aa12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 ABRAXAS2Q15018 415 aa12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 HIST2H2ACQ16777 129 aaPredicted RBP12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 DEFB134Q4QY38 66 aa12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 HIST2H2AA3Q6FI13 130 aa12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 CD163Q86VB7 1156 aa12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 TMEM200AQ86VY9 491 aa12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 KIF2BQ8N4N8 673 aa12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 TTLQ8NG68 377 aa12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 EXT2Q93063 718 aa12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 KIAA1191Q96A73 305 aa12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 LPAR4Q99677 370 aa12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 TMUB1Q9BVT8 246 aa12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 SARGQ9BW04 601 aa12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 UCK2Q9BZX2 261 aa12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 DNAJC11Q9NVH1 559 aa12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 GPRC5BQ9NZH0 403 aa12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 HRH3Q9Y5N1 445 aa12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 NF1P21359 2839 aa12.38□□□□□ -0.43
CTHRC1-202ENST00000415886 A0A087X1B8 175 aa12.37□□□□□ -0.43
CTHRC1-202ENST00000415886 A0A1B0GTH9 108 aa12.37□□□□□ -0.43
CTHRC1-202ENST00000415886 ANKDD1BA6NHY2 528 aa12.37□□□□□ -0.43
CTHRC1-202ENST00000415886 CCNT2O60583 730 aaKnown RBP12.37□□□□□ -0.43
CTHRC1-202ENST00000415886 LTA4HP09960 611 aaKnown RBP12.37□□□□□ -0.43
CTHRC1-202ENST00000415886 TPP2P29144 1249 aaPredicted RBP12.37□□□□□ -0.43
CTHRC1-202ENST00000415886 TYK2P29597 1187 aa12.37□□□□□ -0.43
CTHRC1-202ENST00000415886 DNAJA1P31689 397 aaKnown RBP12.37□□□□□ -0.43
CTHRC1-202ENST00000415886 PTGS2P35354 604 aa12.37□□□□□ -0.43
CTHRC1-202ENST00000415886 RFC3P40938 356 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms