RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 OR8K5Q8NH50 307 aa13.84□□□□□ -0.19
SGCE-202ENST00000415788 WDR36Q8NI36 951 aaKnown RBP13.84□□□□□ -0.19
SGCE-202ENST00000415788 ADAMTS16Q8TE57 1224 aa13.84□□□□□ -0.19
SGCE-202ENST00000415788 COQ10BQ9H8M1 238 aa13.84□□□□□ -0.19
SGCE-202ENST00000415788 FAM60AQ9NP50 221 aa13.84□□□□□ -0.19
SGCE-202ENST00000415788 A0A087WXM4 84 aa13.84□□□□□ -0.19
SGCE-202ENST00000415788 C7orf72A4D263 438 aa13.84□□□□□ -0.19
SGCE-202ENST00000415788 HAT1O14929 419 aa13.84□□□□□ -0.19
SGCE-202ENST00000415788 PRAMEF4O60810 478 aa13.84□□□□□ -0.19
SGCE-202ENST00000415788 CTSVO60911 334 aa13.84□□□□□ -0.19
SGCE-202ENST00000415788 ATP6V1G1O75348 118 aa13.84□□□□□ -0.19
SGCE-202ENST00000415788 VARSP26640 1264 aaKnown RBP13.84□□□□□ -0.19
SGCE-202ENST00000415788 ZBED5Q49AG3 693 aa13.84□□□□□ -0.19
SGCE-202ENST00000415788 C10orf62Q5T681 223 aaPredicted RBP13.84□□□□□ -0.19
SGCE-202ENST00000415788 PRAMEF9Q5VWM5 478 aa13.84□□□□□ -0.19
SGCE-202ENST00000415788 FBXO42Q6P3S6 717 aa13.84□□□□□ -0.19
SGCE-202ENST00000415788 RPS27LQ71UM5 84 aaKnown RBP13.84□□□□□ -0.19
SGCE-202ENST00000415788 RAB11FIP2Q7L804 512 aa13.84□□□□□ -0.19
SGCE-202ENST00000415788 GPR141Q7Z602 305 aa13.84□□□□□ -0.19
SGCE-202ENST00000415788 PACRGLQ8N7B6 248 aa13.84□□□□□ -0.19
SGCE-202ENST00000415788 REPS1Q96D71 796 aa13.84□□□□□ -0.19
SGCE-202ENST00000415788 OLAHQ9NV23 265 aa13.84□□□□□ -0.19
SGCE-202ENST00000415788 SIDT1Q9NXL6 827 aaKnown RBP13.84□□□□□ -0.19
SGCE-202ENST00000415788 TRPS1Q9UHF7 1281 aa13.84□□□□□ -0.19
SGCE-202ENST00000415788 BLOC1S6Q9UL45 172 aa13.84□□□□□ -0.19
SGCE-202ENST00000415788 LOXL2Q9Y4K0 774 aa13.84□□□□□ -0.19
SGCE-202ENST00000415788 PCDHGA4Q9Y5G9 962 aa13.84□□□□□ -0.19
SGCE-202ENST00000415788 PCDHGA11Q9Y5H2 935 aa13.84□□□□□ -0.19
SGCE-202ENST00000415788 EFCAB7A8K855 629 aa13.83□□□□□ -0.2
SGCE-202ENST00000415788 PLD2O14939 933 aa13.83□□□□□ -0.2
SGCE-202ENST00000415788 PRAMEF10O60809 474 aa13.83□□□□□ -0.2
SGCE-202ENST00000415788 ESRRBO95718 433 aa13.83□□□□□ -0.2
SGCE-202ENST00000415788 CHRNGP07510 517 aa13.83□□□□□ -0.2
SGCE-202ENST00000415788 SERPINB1P30740 379 aa13.83□□□□□ -0.2
SGCE-202ENST00000415788 TTKP33981 857 aa13.83□□□□□ -0.2
SGCE-202ENST00000415788 AHRP35869 848 aa13.83□□□□□ -0.2
SGCE-202ENST00000415788 GABRA4P48169 554 aa13.83□□□□□ -0.2
SGCE-202ENST00000415788 PSME3P61289 254 aa13.83□□□□□ -0.2
SGCE-202ENST00000415788 IL11RAQ14626 422 aa13.83□□□□□ -0.2
SGCE-202ENST00000415788 KCNAB1Q14722 419 aa13.83□□□□□ -0.2
SGCE-202ENST00000415788 ARL13AQ5H913 290 aaPredicted RBP13.83□□□□□ -0.2
SGCE-202ENST00000415788 MED27Q6P2C8 311 aa13.83□□□□□ -0.2
SGCE-202ENST00000415788 PAOXQ6QHF9 649 aa13.83□□□□□ -0.2
SGCE-202ENST00000415788 ISLR2Q6UXK2 745 aa13.83□□□□□ -0.2
SGCE-202ENST00000415788 TMIGD1Q6UXZ0 262 aa13.83□□□□□ -0.2
SGCE-202ENST00000415788 MCATQ8IVS2 390 aaKnown RBP13.83□□□□□ -0.2
SGCE-202ENST00000415788 CHCHD4Q8N4Q1 142 aa13.83□□□□□ -0.2
SGCE-202ENST00000415788 MFSD9Q8NBP5 474 aa13.83□□□□□ -0.2
SGCE-202ENST00000415788 TNIP2Q8NFZ5 429 aa13.83□□□□□ -0.2
SGCE-202ENST00000415788 OR4F6Q8NGB9 312 aa13.83□□□□□ -0.2
SGCE-202ENST00000415788 RERGQ96A58 199 aaPredicted RBP13.83□□□□□ -0.2
SGCE-202ENST00000415788 MAELQ96JY0 434 aaKnown RBP13.83□□□□□ -0.2
SGCE-202ENST00000415788 OR2A5Q96R48 311 aa13.83□□□□□ -0.2
SGCE-202ENST00000415788 MID1IP1Q9NPA3 183 aa13.83□□□□□ -0.2
SGCE-202ENST00000415788 FGF21Q9NSA1 209 aa13.83□□□□□ -0.2
SGCE-202ENST00000415788 ADGRE2Q9UHX3 823 aa13.83□□□□□ -0.2
SGCE-202ENST00000415788 PAIP2BQ9ULR5 123 aaKnown RBP13.83□□□□□ -0.2
SGCE-202ENST00000415788 TSC22D4Q9Y3Q8 395 aa13.83□□□□□ -0.2
SGCE-202ENST00000415788 COL27A1Q8IZC6 1860 aaPredicted RBP13.83□□□□□ -0.2
SGCE-202ENST00000415788 TCRBV3S1A0A5B6 114 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 FEZF1A0PJY2 475 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 H0YIV9 168 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 OR1F1O43749 312 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 NRP2O60462 931 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 STAMBPO95630 424 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 JMJD7P0C870 316 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 FOLR1P15328 257 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 TSPAN8P19075 237 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 CD22P20273 847 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 HMOX2P30519 316 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 MC2RQ01718 297 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 MEF2AQ02078 507 aaPredicted RBP13.82□□□□□ -0.2
SGCE-202ENST00000415788 CBX3Q13185 183 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 TCTE1Q5JU00 501 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 NXNQ6DKJ4 435 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 LAS2Q8IYD9 372 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 ZNF655Q8N720 491 aaPredicted RBP13.82□□□□□ -0.2
SGCE-202ENST00000415788 BMPERQ8N8U9 685 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 ANKFN1Q8N957 763 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 TRPV3Q8NET8 790 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 MOCOSQ96EN8 888 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 HSPBAP1Q96EW2 488 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 FAR2Q96K12 515 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 CDK15Q96Q40 435 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 ACSS2Q9NR19 701 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 FBXO8Q9NRD0 319 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 ENAMQ9NRM1 1142 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 TBC1D23Q9NUY8 699 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 ADA2Q9NZK5 511 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 SERTAD3Q9UJW9 196 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 COPG1Q9Y678 874 aaKnown RBP13.82□□□□□ -0.2
SGCE-202ENST00000415788 DYTNA2CJ06 578 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 PPP6CO00743 305 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 HGFP14210 728 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 BCL6P41182 706 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 ERVPABLB-1P60509 514 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 SH3BP2P78314 561 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 CYP4F3Q08477 520 aa13.82□□□□□ -0.2
SGCE-202ENST00000415788 CPSF6Q16630 551 aaKnown RBP eCLIP13.82□□□□□ -0.2
SGCE-202ENST00000415788 NRF1Q16656 503 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms