RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 PCDHGA9Q9Y5G4 932 aaKnown RBP13.82□□□□□ -0.2
LIMS1-206ENST00000414829 LOC102723996A0A087X1L8 192 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 ARHGAP10A1A4S6 786 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 FOXO6A8MYZ6 492 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 FFAR3O14843 346 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 GPR42O15529 346 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 TYROBPO43914 113 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 GUCY1B2O75343 617 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 ULK1O75385 1050 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 SPAG7O75391 227 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 SNUPNO95149 360 aaKnown RBP13.81□□□□□ -0.2
LIMS1-206ENST00000414829 CHEK2O96017 543 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 PPP2R1BP30154 601 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 TLX1P31314 330 aaPredicted RBP13.81□□□□□ -0.2
LIMS1-206ENST00000414829 RPS13P62277 151 aaKnown RBP13.81□□□□□ -0.2
LIMS1-206ENST00000414829 PCLAFQ15004 111 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 ABRAXAS2Q15018 415 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 TNFAIP8L3Q5GJ75 292 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 OR4C11Q6IEV9 310 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 ADNP2Q6IQ32 1131 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 KIRREL2Q6UWL6 708 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 NDUFAF7Q7L592 441 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 C10orf107Q8IVU9 208 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 ZNF595Q8IYB9 648 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 GOLGA6L1Q8N7Z2 621 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 CDYL2Q8N8U2 506 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 ACOT4Q8N9L9 421 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 METTL6Q8TCB7 284 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 AGAP11Q8TF27 550 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 CNDP1Q96KN2 507 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 MID1IP1Q9NPA3 183 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 PRDM9Q9NQV7 894 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 ADAM29Q9UKF5 820 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 KMT2BQ9UMN6 2715 aaPredicted RBP13.81□□□□□ -0.2
LIMS1-206ENST00000414829 SPTBP11277 2137 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 SEC16AO15027 2179 aa13.81□□□□□ -0.2
LIMS1-206ENST00000414829 ANKRD12Q6UB98 2062 aa13.8□□□□□ -0.2
LIMS1-206ENST00000414829 NSG1A0A0A6YYJ2 146 aa13.8□□□□□ -0.2
LIMS1-206ENST00000414829 SOCS6O14544 535 aa13.8□□□□□ -0.2
LIMS1-206ENST00000414829 NPHS1O60500 1241 aa13.8□□□□□ -0.2
LIMS1-206ENST00000414829 PRMT3O60678 531 aa13.8□□□□□ -0.2
LIMS1-206ENST00000414829 OR4F21O95013 312 aa13.8□□□□□ -0.2
LIMS1-206ENST00000414829 TBX6O95947 436 aaPredicted RBP13.8□□□□□ -0.2
LIMS1-206ENST00000414829 ATP5A1P25705 553 aaKnown RBP13.8□□□□□ -0.2
LIMS1-206ENST00000414829 CERS1P27544 350 aa13.8□□□□□ -0.2
LIMS1-206ENST00000414829 BUD31P41223 144 aaPredicted RBP13.8□□□□□ -0.2
LIMS1-206ENST00000414829 HSD17B7P56937 341 aa13.8□□□□□ -0.2
LIMS1-206ENST00000414829 GALNT1Q10472 559 aaPredicted RBP13.8□□□□□ -0.2
LIMS1-206ENST00000414829 COL9A2Q14055 689 aaPredicted RBP13.8□□□□□ -0.2
LIMS1-206ENST00000414829 NSDHLQ15738 373 aa13.8□□□□□ -0.2
LIMS1-206ENST00000414829 EXT1Q16394 746 aa13.8□□□□□ -0.2
LIMS1-206ENST00000414829 FAM69BQ5VUD6 431 aa13.8□□□□□ -0.2
LIMS1-206ENST00000414829 CYP20A1Q6UW02 462 aa13.8□□□□□ -0.2
LIMS1-206ENST00000414829 TMEM205Q6UW68 189 aa13.8□□□□□ -0.2
LIMS1-206ENST00000414829 RIPOR1Q6ZS17 1223 aa13.8□□□□□ -0.2
LIMS1-206ENST00000414829 HDXQ7Z353 690 aa13.8□□□□□ -0.2
LIMS1-206ENST00000414829 CA13Q8N1Q1 262 aa13.8□□□□□ -0.2
LIMS1-206ENST00000414829 PLPP5Q8NEB5 264 aa13.8□□□□□ -0.2
LIMS1-206ENST00000414829 OR11G2Q8NGC1 345 aa13.8□□□□□ -0.2
LIMS1-206ENST00000414829 OR5T3Q8NGG3 340 aa13.8□□□□□ -0.2
LIMS1-206ENST00000414829 PPP1R14CQ8TAE6 165 aa13.8□□□□□ -0.2
LIMS1-206ENST00000414829 C9orf43Q8TAL5 461 aaPredicted RBP13.8□□□□□ -0.2
LIMS1-206ENST00000414829 TUBB6Q9BUF5 446 aa13.8□□□□□ -0.2
LIMS1-206ENST00000414829 OR51B5Q9H339 312 aa13.8□□□□□ -0.2
LIMS1-206ENST00000414829 WDR41Q9HAD4 459 aa13.8□□□□□ -0.2
LIMS1-206ENST00000414829 LANCL2Q9NS86 450 aa13.8□□□□□ -0.2
LIMS1-206ENST00000414829 DAPP1Q9UN19 280 aa13.8□□□□□ -0.2
LIMS1-206ENST00000414829 C4orf51C9J302 202 aa13.79□□□□□ -0.2
LIMS1-206ENST00000414829 MANBAO00462 879 aa13.79□□□□□ -0.2
LIMS1-206ENST00000414829 PLPP1O14494 284 aa13.79□□□□□ -0.2
LIMS1-206ENST00000414829 BIRC5O15392 142 aa13.79□□□□□ -0.2
LIMS1-206ENST00000414829 FAM87AP0C7U9 286 aa13.79□□□□□ -0.2
LIMS1-206ENST00000414829 TSPAN8P19075 237 aa13.79□□□□□ -0.2
LIMS1-206ENST00000414829 PGDP52209 483 aa13.79□□□□□ -0.2
LIMS1-206ENST00000414829 LIM2P55344 173 aa13.79□□□□□ -0.2
LIMS1-206ENST00000414829 SOX8P57073 446 aa13.79□□□□□ -0.2
LIMS1-206ENST00000414829 OLR1P78380 273 aa13.79□□□□□ -0.2
LIMS1-206ENST00000414829 RHAGQ02094 409 aa13.79□□□□□ -0.2
LIMS1-206ENST00000414829 BIKQ13323 160 aa13.79□□□□□ -0.2
LIMS1-206ENST00000414829 VWA5B1Q5TIE3 1220 aa13.79□□□□□ -0.2
LIMS1-206ENST00000414829 TCTN3Q6NUS6 607 aa13.79□□□□□ -0.2
LIMS1-206ENST00000414829 EXOC3L1Q86VI1 746 aa13.79□□□□□ -0.2
LIMS1-206ENST00000414829 LAPTM4BQ86VI4 370 aa13.79□□□□□ -0.2
LIMS1-206ENST00000414829 TM9SF4Q92544 642 aa13.79□□□□□ -0.2
LIMS1-206ENST00000414829 LPAR4Q99677 370 aa13.79□□□□□ -0.2
LIMS1-206ENST00000414829 SLC25A23Q9BV35 468 aa13.79□□□□□ -0.2
LIMS1-206ENST00000414829 RBCK1Q9BYM8 510 aa13.79□□□□□ -0.2
LIMS1-206ENST00000414829 AICDAQ9GZX7 198 aa13.79□□□□□ -0.2
LIMS1-206ENST00000414829 ZNF700Q9H0M5 742 aa13.79□□□□□ -0.2
LIMS1-206ENST00000414829 ACBD3Q9H3P7 528 aa13.79□□□□□ -0.2
LIMS1-206ENST00000414829 DDX31Q9H8H2 851 aaKnown RBP13.79□□□□□ -0.2
LIMS1-206ENST00000414829 VIPAS39Q9H9C1 493 aa13.79□□□□□ -0.2
LIMS1-206ENST00000414829 PFDN4Q9NQP4 134 aa13.79□□□□□ -0.2
LIMS1-206ENST00000414829 PRDM7Q9NQW5 492 aa13.79□□□□□ -0.2
LIMS1-206ENST00000414829 GPR83Q9NYM4 423 aa13.79□□□□□ -0.2
LIMS1-206ENST00000414829 SLC17A7Q9P2U7 560 aa13.79□□□□□ -0.2
LIMS1-206ENST00000414829 SLC12A4Q9UP95 1085 aa13.79□□□□□ -0.2
LIMS1-206ENST00000414829 ZNF451Q9Y4E5 1061 aa13.79□□□□□ -0.2
LIMS1-206ENST00000414829 DSPP15924 2871 aaKnown RBP13.79□□□□□ -0.2
LIMS1-206ENST00000414829 ZFHX4Q86UP3 3567 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms