RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 ACAT2Q9BWD1 397 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 MRPS26Q9BYN8 205 aaKnown RBP9.5□□□□□ -0.89
DDB1-202ENST00000414411 LRRN3Q9H3W5 708 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 NANOGQ9H9S0 305 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 PAPOLBQ9NRJ5 636 aaKnown RBP9.5□□□□□ -0.89
DDB1-202ENST00000414411 TOR4AQ9NXH8 423 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 GPRC5BQ9NZH0 403 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 SEMA5BQ9P283 1151 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 POLR3HQ9Y535 204 aaPredicted RBP9.5□□□□□ -0.89
DDB1-202ENST00000414411 MDC1Q14676 2089 aaKnown RBP9.5□□□□□ -0.89
DDB1-202ENST00000414411 DCHS1Q96JQ0 3298 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 SPTBN4Q9H254 2564 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 TCRBV5S2A0A599 114 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 GSAPA4D1B5 854 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 SOCS2O14508 198 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 DUX1O43812 170 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 CPNE6O95741 557 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 RPLP0P05388 317 aaKnown RBP9.5□□□□□ -0.89
DDB1-202ENST00000414411 TFAP2AP05549 437 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 CSRP1P21291 193 aaKnown RBP9.5□□□□□ -0.89
DDB1-202ENST00000414411 FASP25445 335 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 HTR1EP28566 365 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 RPL5P46777 297 aaKnown RBP9.5□□□□□ -0.89
DDB1-202ENST00000414411 PIK3CGP48736 1102 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 GFERP55789 205 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 ILKQ13418 452 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 TSTA3Q13630 321 aaPredicted RBP9.5□□□□□ -0.89
DDB1-202ENST00000414411 APOFQ13790 326 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 CLPPQ16740 277 aaPredicted RBP9.5□□□□□ -0.89
DDB1-202ENST00000414411 RFTN2Q52LD8 501 aaPredicted RBP9.5□□□□□ -0.89
DDB1-202ENST00000414411 INTS11Q5TA45 600 aaKnown RBP9.5□□□□□ -0.89
DDB1-202ENST00000414411 THEMIS2Q5TEJ8 643 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 KIAA1614Q5VZ46 1190 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 IFNEQ86WN2 208 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 PLXDC1Q8IUK5 500 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 EPHX4Q8IUS5 362 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 FAM20CQ8IXL6 584 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 SNRNP27Q8WVK2 155 aaKnown RBP9.5□□□□□ -0.89
DDB1-202ENST00000414411 WDR34Q96EX3 536 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 PRPF18Q99633 342 aaKnown RBP9.5□□□□□ -0.89
DDB1-202ENST00000414411 NUDT22Q9BRQ3 303 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 ANKRD60Q9BZ19 345 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 EHD1Q9H4M9 534 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 PRM3Q9NNZ6 103 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 NDUFA13Q9P0J0 144 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 RNF11Q9Y3C5 154 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 ANGPTL3Q9Y5C1 460 aa9.5□□□□□ -0.89
DDB1-202ENST00000414411 MN1Q10571 1320 aaPredicted RBP9.5□□□□□ -0.89
DDB1-202ENST00000414411 COL27A1Q8IZC6 1860 aaPredicted RBP9.49□□□□□ -0.89
DDB1-202ENST00000414411 SAC3D1A6NKF1 404 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 E7EQ34 232 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 RGS14O43566 566 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 DKK1O94907 266 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 FCGR1AP12314 374 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 VARSP26640 1264 aaKnown RBP9.49□□□□□ -0.89
DDB1-202ENST00000414411 GSTT1P30711 240 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 POLE2P56282 527 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 RPL38P63173 70 aaKnown RBP9.49□□□□□ -0.89
DDB1-202ENST00000414411 CYP51A1Q16850 503 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 SMU1Q2TAY7 513 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 NHSL2Q5HYW2 709 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 CATSPEREQ5SY80 951 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 DMRTA1Q5VZB9 504 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 ZNF425Q6IV72 752 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 ARMC6Q6NXE6 501 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 TMEM71Q6P5X7 295 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 NXPE4Q6UWF7 544 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 DLEU7Q6UYE1 221 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 C17orf64Q86WR6 236 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 FAM129CQ86XR2 697 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 CARFQ8N187 725 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 L3MBTL4Q8NA19 623 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 TRPV3Q8NET8 790 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 SVIPQ8NHG7 77 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 ZFAND2BQ8WV99 257 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 SLC5A11Q8WWX8 675 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 ZDHHC12Q96GR4 267 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 CD180Q99467 661 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 MAP3K3Q99759 626 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 ARPC5LQ9BPX5 153 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 SLC6A20Q9NP91 592 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 MRPS30Q9NP92 439 aaKnown RBP9.49□□□□□ -0.89
DDB1-202ENST00000414411 C1GALT1Q9NS00 363 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 TMEM9Q9P0T7 183 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 TRPS1Q9UHF7 1281 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 ATXN7L1Q9ULK2 861 aaPredicted RBP9.49□□□□□ -0.89
DDB1-202ENST00000414411 PCDHGA1Q9Y5H4 931 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 SPTBP11277 2137 aa9.49□□□□□ -0.89
DDB1-202ENST00000414411 MYOCOSA0A1B0GUC4 107 aa9.48□□□□□ -0.89
DDB1-202ENST00000414411 ARHGAP10A1A4S6 786 aa9.48□□□□□ -0.89
DDB1-202ENST00000414411 FAM149AA5PLN7 773 aa9.48□□□□□ -0.89
DDB1-202ENST00000414411 H7BY64 318 aa9.48□□□□□ -0.89
DDB1-202ENST00000414411 FFAR3O14843 346 aa9.48□□□□□ -0.89
DDB1-202ENST00000414411 SLC30A4O14863 429 aa9.48□□□□□ -0.89
DDB1-202ENST00000414411 GPR42O15529 346 aa9.48□□□□□ -0.89
DDB1-202ENST00000414411 TPST1O60507 370 aa9.48□□□□□ -0.89
DDB1-202ENST00000414411 UGDHO60701 494 aa9.48□□□□□ -0.89
DDB1-202ENST00000414411 RSL1D1O76021 490 aaKnown RBP9.48□□□□□ -0.89
DDB1-202ENST00000414411 EBLN1P0CF75 366 aa9.48□□□□□ -0.89
DDB1-202ENST00000414411 C1GALT1C1LP0DN25 315 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms