RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 ALPPP05187 535 aa16.07■□□□□ 0.16
SCAMP4-204ENST00000414057 VARSP26640 1264 aaKnown RBP16.07■□□□□ 0.16
SCAMP4-204ENST00000414057 CD97P48960 835 aa16.07■□□□□ 0.16
SCAMP4-204ENST00000414057 RASSF2P50749 326 aa16.07■□□□□ 0.16
SCAMP4-204ENST00000414057 ATP4BP51164 291 aa16.07■□□□□ 0.16
SCAMP4-204ENST00000414057 MLLT10P55197 1068 aa16.07■□□□□ 0.16
SCAMP4-204ENST00000414057 CHIT1Q13231 466 aa16.07■□□□□ 0.16
SCAMP4-204ENST00000414057 SMU1Q2TAY7 513 aa16.07■□□□□ 0.16
SCAMP4-204ENST00000414057 OGFOD2Q6N063 350 aa16.07■□□□□ 0.16
SCAMP4-204ENST00000414057 MRPL14Q6P1L8 145 aaKnown RBP16.07■□□□□ 0.16
SCAMP4-204ENST00000414057 TTLL10Q6ZVT0 673 aa16.07■□□□□ 0.16
SCAMP4-204ENST00000414057 MRGPREQ86SM8 312 aa16.07■□□□□ 0.16
SCAMP4-204ENST00000414057 WDR34Q96EX3 536 aa16.07■□□□□ 0.16
SCAMP4-204ENST00000414057 PTCD3Q96EY7 689 aaKnown RBP16.07■□□□□ 0.16
SCAMP4-204ENST00000414057 VPS50Q96JG6 964 aa16.07■□□□□ 0.16
SCAMP4-204ENST00000414057 ENAMQ9NRM1 1142 aa16.07■□□□□ 0.16
SCAMP4-204ENST00000414057 C5AR2Q9P296 337 aa16.07■□□□□ 0.16
SCAMP4-204ENST00000414057 VPS4AQ9UN37 437 aa16.07■□□□□ 0.16
SCAMP4-204ENST00000414057 KLHL20Q9Y2M5 609 aa16.07■□□□□ 0.16
SCAMP4-204ENST00000414057 RNF11Q9Y3C5 154 aa16.07■□□□□ 0.16
SCAMP4-204ENST00000414057 KCNE1BA0A087WTH5 132 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 A6NL46 340 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 SLC28A1O00337 649 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 RGS14O43566 566 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 PRICKLE3O43900 615 aaPredicted RBP16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 UNC5CO95185 931 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 LINC00032P0C843 101 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 PRR35P0CG20 571 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 PCSK2P16519 638 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 NPPBP16860 134 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 LBPP18428 481 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 CALB2P22676 271 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 PRDX6P30041 224 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 CMPK1P30085 196 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 GRIA3P42263 894 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 LAPTM5Q13571 262 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 UBAP2LQ14157 1087 aaKnown RBP16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 XKR6Q5GH73 641 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 PAGE2BQ5JRK9 111 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 COLEC12Q5KU26 742 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 PRAMEF13Q5VWM6 474 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 ATG9BQ674R7 924 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 FCRL6Q6DN72 434 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 GRHL2Q6ISB3 625 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 TRIM46Q7Z4K8 759 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 SPATA19Q7Z5L4 167 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 MYLK4Q86YV6 388 aaPredicted RBP16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 PPFIBP2Q8ND30 876 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 TUBGCP3Q96CW5 907 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 REPS1Q96D71 796 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 OR4K3Q96R72 315 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 EFCAB11Q9BUY7 163 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 ELOVL6Q9H5J4 265 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 ZNF385DQ9H6B1 395 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 AKTIPQ9H8T0 292 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 WDR54Q9H977 334 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 CUTCQ9NTM9 273 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 NXT1Q9UKK6 140 aaKnown RBP16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 KLK4Q9Y5K2 254 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 CAPN7Q9Y6W3 813 aa16.06■□□□□ 0.16
SCAMP4-204ENST00000414057 H0YIV9 168 aa16.05■□□□□ 0.16
SCAMP4-204ENST00000414057 MANBAO00462 879 aa16.05■□□□□ 0.16
SCAMP4-204ENST00000414057 DSCR3O14972 297 aa16.05■□□□□ 0.16
SCAMP4-204ENST00000414057 ONECUT2O95948 504 aa16.05■□□□□ 0.16
SCAMP4-204ENST00000414057 CTSBP07858 339 aa16.05■□□□□ 0.16
SCAMP4-204ENST00000414057 MNAT1P51948 309 aa16.05■□□□□ 0.16
SCAMP4-204ENST00000414057 SQLEQ14534 574 aa16.05■□□□□ 0.16
SCAMP4-204ENST00000414057 SLC9A5Q14940 896 aa16.05■□□□□ 0.16
SCAMP4-204ENST00000414057 NADK2Q4G0N4 442 aa16.05■□□□□ 0.16
SCAMP4-204ENST00000414057 ATP6AP1LQ52LC2 224 aa16.05■□□□□ 0.16
SCAMP4-204ENST00000414057 DCAF10Q5QP82 559 aa16.05■□□□□ 0.16
SCAMP4-204ENST00000414057 THEMIS2Q5TEJ8 643 aa16.05■□□□□ 0.16
SCAMP4-204ENST00000414057 PARP9Q8IXQ6 854 aa16.05■□□□□ 0.16
SCAMP4-204ENST00000414057 OR2L3Q8NG85 312 aa16.05■□□□□ 0.16
SCAMP4-204ENST00000414057 CPT1CQ8TCG5 803 aa16.05■□□□□ 0.16
SCAMP4-204ENST00000414057 SLC5A11Q8WWX8 675 aa16.05■□□□□ 0.16
SCAMP4-204ENST00000414057 UBE2E3Q969T4 207 aa16.05■□□□□ 0.16
SCAMP4-204ENST00000414057 CMTM5Q96DZ9 223 aa16.05■□□□□ 0.16
SCAMP4-204ENST00000414057 NSL1Q96IY1 281 aa16.05■□□□□ 0.16
SCAMP4-204ENST00000414057 PPP3R2Q96LZ3 170 aa16.05■□□□□ 0.16
SCAMP4-204ENST00000414057 C3orf30Q96M34 536 aa16.05■□□□□ 0.16
SCAMP4-204ENST00000414057 SMAD5Q99717 465 aaKnown RBP16.05■□□□□ 0.16
SCAMP4-204ENST00000414057 NUDT9Q9BW91 350 aa16.05■□□□□ 0.16
SCAMP4-204ENST00000414057 SLAMF7Q9NQ25 335 aa16.05■□□□□ 0.16
SCAMP4-204ENST00000414057 P4HTMQ9NXG6 502 aa16.05■□□□□ 0.16
SCAMP4-204ENST00000414057 PCDHGA11Q9Y5H2 935 aa16.05■□□□□ 0.16
SCAMP4-204ENST00000414057 ASH1LQ9NR48 2969 aaKnown RBP16.05■□□□□ 0.16
SCAMP4-204ENST00000414057 ATXN8OSP0DMR3 200 aa16.04■□□□□ 0.16
SCAMP4-204ENST00000414057 HSD3B1P14060 373 aa16.04■□□□□ 0.16
SCAMP4-204ENST00000414057 ITGAXP20702 1163 aa16.04■□□□□ 0.16
SCAMP4-204ENST00000414057 HSD3B2P26439 372 aa16.04■□□□□ 0.16
SCAMP4-204ENST00000414057 GCGRP47871 477 aa16.04■□□□□ 0.16
SCAMP4-204ENST00000414057 MRPL19P49406 292 aaKnown RBP16.04■□□□□ 0.16
SCAMP4-204ENST00000414057 MAD2L1Q13257 205 aaPredicted RBP16.04■□□□□ 0.16
SCAMP4-204ENST00000414057 DOC2AQ14183 400 aa16.04■□□□□ 0.16
SCAMP4-204ENST00000414057 ABRAXAS2Q15018 415 aa16.04■□□□□ 0.16
SCAMP4-204ENST00000414057 CPSF6Q16630 551 aaKnown RBP eCLIP16.04■□□□□ 0.16
SCAMP4-204ENST00000414057 GSTA3Q16772 222 aa16.04■□□□□ 0.16
SCAMP4-204ENST00000414057 HIST2H2ACQ16777 129 aaPredicted RBP16.04■□□□□ 0.16
SCAMP4-204ENST00000414057 FRG2Q64ET8 278 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms