RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 TRIM40Q6P9F5 258 aa16.31■□□□□ 0.2
HSPG2-204ENST00000412328 IQCKQ8N0W5 287 aa16.31■□□□□ 0.2
HSPG2-204ENST00000412328 L3MBTL4Q8NA19 623 aa16.31■□□□□ 0.2
HSPG2-204ENST00000412328 GALNT11Q8NCW6 608 aa16.31■□□□□ 0.2
HSPG2-204ENST00000412328 NFAM1Q8NET5 270 aaPredicted RBP16.31■□□□□ 0.2
HSPG2-204ENST00000412328 OR52B6Q8NGF0 335 aa16.31■□□□□ 0.2
HSPG2-204ENST00000412328 WDR20Q8TBZ3 569 aa16.31■□□□□ 0.2
HSPG2-204ENST00000412328 CCT6BQ92526 530 aa16.31■□□□□ 0.2
HSPG2-204ENST00000412328 NSUN5Q96P11 429 aaKnown RBP16.31■□□□□ 0.2
HSPG2-204ENST00000412328 SERINC2Q96SA4 455 aa16.31■□□□□ 0.2
HSPG2-204ENST00000412328 C1QTNF3Q9BXJ4 246 aa16.31■□□□□ 0.2
HSPG2-204ENST00000412328 ILKAPQ9H0C8 392 aaPredicted RBP16.31■□□□□ 0.2
HSPG2-204ENST00000412328 MMP25Q9NPA2 562 aa16.31■□□□□ 0.2
HSPG2-204ENST00000412328 DMRT3Q9NQL9 472 aa16.31■□□□□ 0.2
HSPG2-204ENST00000412328 PRDM9Q9NQV7 894 aa16.31■□□□□ 0.2
HSPG2-204ENST00000412328 KCMF1Q9P0J7 381 aa16.31■□□□□ 0.2
HSPG2-204ENST00000412328 DAPP1Q9UN19 280 aa16.31■□□□□ 0.2
HSPG2-204ENST00000412328 MMACHCQ9Y4U1 282 aa16.31■□□□□ 0.2
HSPG2-204ENST00000412328 IKBKGQ9Y6K9 419 aa16.31■□□□□ 0.2
HSPG2-204ENST00000412328 POLEQ07864 2286 aa16.31■□□□□ 0.2
HSPG2-204ENST00000412328 FLNBO75369 2602 aaKnown RBP16.31■□□□□ 0.2
HSPG2-204ENST00000412328 HECTD1Q9ULT8 2610 aa16.3■□□□□ 0.2
HSPG2-204ENST00000412328 SAGE2PA6NJ88 616 aa16.3■□□□□ 0.2
HSPG2-204ENST00000412328 H0YIV9 168 aa16.3■□□□□ 0.2
HSPG2-204ENST00000412328 MAN1A2O60476 641 aa16.3■□□□□ 0.2
HSPG2-204ENST00000412328 RBP1P09455 135 aa16.3■□□□□ 0.2
HSPG2-204ENST00000412328 EEF1DP29692 281 aaKnown RBP16.3■□□□□ 0.2
HSPG2-204ENST00000412328 SERPINB1P30740 379 aa16.3■□□□□ 0.2
HSPG2-204ENST00000412328 TNFSF10P50591 281 aa16.3■□□□□ 0.2
HSPG2-204ENST00000412328 ZNF169Q14929 603 aaPredicted RBP16.3■□□□□ 0.2
HSPG2-204ENST00000412328 BTBD16Q32M84 506 aa16.3■□□□□ 0.2
HSPG2-204ENST00000412328 IRAK1BP1Q5VVH5 260 aa16.3■□□□□ 0.2
HSPG2-204ENST00000412328 LIPJQ5W064 366 aa16.3■□□□□ 0.2
HSPG2-204ENST00000412328 FAM219BQ5XKK7 198 aa16.3■□□□□ 0.2
HSPG2-204ENST00000412328 CATSPER1Q8NEC5 780 aa16.3■□□□□ 0.2
HSPG2-204ENST00000412328 HUS1BQ8NHY5 278 aa16.3■□□□□ 0.2
HSPG2-204ENST00000412328 M1APQ8TC57 530 aa16.3■□□□□ 0.2
HSPG2-204ENST00000412328 ELP5Q8TE02 316 aa16.3■□□□□ 0.2
HSPG2-204ENST00000412328 MRPL46Q9H2W6 279 aaKnown RBP16.3■□□□□ 0.2
HSPG2-204ENST00000412328 SLAMF7Q9NQ25 335 aa16.3■□□□□ 0.2
HSPG2-204ENST00000412328 ASF1BQ9NVP2 202 aa16.3■□□□□ 0.2
HSPG2-204ENST00000412328 PPIEQ9UNP9 301 aaKnown RBP16.3■□□□□ 0.2
HSPG2-204ENST00000412328 USP9YO00507 2555 aaPredicted RBP16.29■□□□□ 0.2
HSPG2-204ENST00000412328 A8MT66 165 aa16.29■□□□□ 0.2
HSPG2-204ENST00000412328 RTCAO00442 366 aaKnown RBP16.29■□□□□ 0.2
HSPG2-204ENST00000412328 PLPP1O14494 284 aa16.29■□□□□ 0.2
HSPG2-204ENST00000412328 PRMT3O60678 531 aa16.29■□□□□ 0.2
HSPG2-204ENST00000412328 ETHE1O95571 254 aa16.29■□□□□ 0.2
HSPG2-204ENST00000412328 SHBGP04278 402 aa16.29■□□□□ 0.2
HSPG2-204ENST00000412328 ICAM2P13598 275 aa16.29■□□□□ 0.2
HSPG2-204ENST00000412328 ATP5A1P25705 553 aaKnown RBP16.29■□□□□ 0.2
HSPG2-204ENST00000412328 PIK3CBP42338 1070 aa16.29■□□□□ 0.2
HSPG2-204ENST00000412328 MTTPP55157 894 aa16.29■□□□□ 0.2
HSPG2-204ENST00000412328 OR4D2P58180 307 aa16.29■□□□□ 0.2
HSPG2-204ENST00000412328 EXT1Q16394 746 aa16.29■□□□□ 0.2
HSPG2-204ENST00000412328 TEX35Q5T0J7 233 aa16.29■□□□□ 0.2
HSPG2-204ENST00000412328 KHDRBS2Q5VWX1 349 aaKnown RBP16.29■□□□□ 0.2
HSPG2-204ENST00000412328 SH2D5Q6ZV89 423 aa16.29■□□□□ 0.2
HSPG2-204ENST00000412328 CRLF3Q8IUI8 442 aa16.29■□□□□ 0.2
HSPG2-204ENST00000412328 FAM47BQ8NA70 645 aa16.29■□□□□ 0.2
HSPG2-204ENST00000412328 APCDD1LQ8NCL9 501 aa16.29■□□□□ 0.2
HSPG2-204ENST00000412328 ADAMTS18Q8TE60 1221 aa16.29■□□□□ 0.2
HSPG2-204ENST00000412328 ZNF483Q8TF39 744 aaPredicted RBP16.29■□□□□ 0.2
HSPG2-204ENST00000412328 HAS2Q92819 552 aa16.29■□□□□ 0.2
HSPG2-204ENST00000412328 UBE2E3Q969T4 207 aa16.29■□□□□ 0.2
HSPG2-204ENST00000412328 MTBPQ96DY7 904 aa16.29■□□□□ 0.2
HSPG2-204ENST00000412328 FAR2Q96K12 515 aa16.29■□□□□ 0.2
HSPG2-204ENST00000412328 PTCHD1Q96NR3 888 aa16.29■□□□□ 0.2
HSPG2-204ENST00000412328 KCNC2Q96PR1 638 aa16.29■□□□□ 0.2
HSPG2-204ENST00000412328 LPAR4Q99677 370 aa16.29■□□□□ 0.2
HSPG2-204ENST00000412328 MRPL57Q9BQC6 102 aaKnown RBP16.29■□□□□ 0.2
HSPG2-204ENST00000412328 IPPKQ9H8X2 491 aa16.29■□□□□ 0.2
HSPG2-204ENST00000412328 PSMC3IPQ9P2W1 217 aaPredicted RBP16.29■□□□□ 0.2
HSPG2-204ENST00000412328 ZNF223Q9UK11 482 aaPredicted RBP16.29■□□□□ 0.2
HSPG2-204ENST00000412328 TMCO1Q9UM00 188 aa16.29■□□□□ 0.2
HSPG2-204ENST00000412328 TNPO3Q9Y5L0 923 aaKnown RBP16.29■□□□□ 0.2
HSPG2-204ENST00000412328 SPTAN1Q13813 2472 aaKnown RBP16.28■□□□□ 0.2
HSPG2-204ENST00000412328 NBPF19A0A087WUL8 3843 aa16.28■□□□□ 0.2
HSPG2-204ENST00000412328 TCP11X1B4DZS4 312 aa16.28■□□□□ 0.2
HSPG2-204ENST00000412328 B3GALT2O43825 422 aa16.28■□□□□ 0.2
HSPG2-204ENST00000412328 WDPCPO95876 746 aa16.28■□□□□ 0.2
HSPG2-204ENST00000412328 PCNAP12004 261 aa16.28■□□□□ 0.2
HSPG2-204ENST00000412328 HIST1H1TP22492 207 aaPredicted RBP16.28■□□□□ 0.2
HSPG2-204ENST00000412328 GNLYP22749 145 aa16.28■□□□□ 0.2
HSPG2-204ENST00000412328 PPP2R1BP30154 601 aa16.28■□□□□ 0.2
HSPG2-204ENST00000412328 HPDP32754 393 aaPredicted RBP16.28■□□□□ 0.2
HSPG2-204ENST00000412328 PIK3CGP48736 1102 aa16.28■□□□□ 0.2
HSPG2-204ENST00000412328 HSD17B7P56937 341 aa16.28■□□□□ 0.2
HSPG2-204ENST00000412328 AP2B1P63010 937 aa16.28■□□□□ 0.2
HSPG2-204ENST00000412328 TLR1Q15399 786 aa16.28■□□□□ 0.2
HSPG2-204ENST00000412328 TERF2Q15554 542 aa16.28■□□□□ 0.2
HSPG2-204ENST00000412328 HIST2H2ACQ16777 129 aaPredicted RBP16.28■□□□□ 0.2
HSPG2-204ENST00000412328 GGTA1PQ4G0N0 100 aa16.28■□□□□ 0.2
HSPG2-204ENST00000412328 TMEM35AQ53FP2 167 aa16.28■□□□□ 0.2
HSPG2-204ENST00000412328 DEPDC1Q5TB30 811 aa16.28■□□□□ 0.2
HSPG2-204ENST00000412328 HIST2H2AA3Q6FI13 130 aa16.28■□□□□ 0.2
HSPG2-204ENST00000412328 RPUSD3Q6P087 351 aaKnown RBP16.28■□□□□ 0.2
HSPG2-204ENST00000412328 RPS27LQ71UM5 84 aaKnown RBP16.28■□□□□ 0.2
HSPG2-204ENST00000412328 ARMC10Q8N2F6 343 aa16.28■□□□□ 0.2
HSPG2-204ENST00000412328 KIF2BQ8N4N8 673 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms