RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 SETDB1Q15047 1291 aa16.59■□□□□ 0.25
LSM5-204ENST00000409909 HIST2H2ACQ16777 129 aaPredicted RBP16.59■□□□□ 0.25
LSM5-204ENST00000409909 PFKFB4Q16877 469 aa16.59■□□□□ 0.25
LSM5-204ENST00000409909 PAGE2BQ5JRK9 111 aa16.59■□□□□ 0.25
LSM5-204ENST00000409909 ZNF324BQ6AW86 544 aaPredicted RBP16.59■□□□□ 0.25
LSM5-204ENST00000409909 HIST2H2AA3Q6FI13 130 aa16.59■□□□□ 0.25
LSM5-204ENST00000409909 TRIM40Q6P9F5 258 aa16.59■□□□□ 0.25
LSM5-204ENST00000409909 SCUBE1Q8IWY4 988 aa16.59■□□□□ 0.25
LSM5-204ENST00000409909 LAS2Q8IYD9 372 aa16.59■□□□□ 0.25
LSM5-204ENST00000409909 ST6GALNAC3Q8NDV1 305 aa16.59■□□□□ 0.25
LSM5-204ENST00000409909 NFAM1Q8NET5 270 aaPredicted RBP16.59■□□□□ 0.25
LSM5-204ENST00000409909 KIF18AQ8NI77 898 aa16.59■□□□□ 0.25
LSM5-204ENST00000409909 ZNF473Q8WTR7 871 aaKnown RBP16.59■□□□□ 0.25
LSM5-204ENST00000409909 ZNF358Q9NW07 568 aa16.59■□□□□ 0.25
LSM5-204ENST00000409909 NAV2Q8IVL1 2488 aa16.59■□□□□ 0.25
LSM5-204ENST00000409909 CCDC189A1A4V9 331 aa16.58■□□□□ 0.24
LSM5-204ENST00000409909 A8MUA0 341 aa16.58■□□□□ 0.24
LSM5-204ENST00000409909 CYR61O00622 381 aa16.58■□□□□ 0.24
LSM5-204ENST00000409909 EPB42P16452 691 aa16.58■□□□□ 0.24
LSM5-204ENST00000409909 MAGEA12P43365 314 aa16.58■□□□□ 0.24
LSM5-204ENST00000409909 LIM2P55344 173 aa16.58■□□□□ 0.24
LSM5-204ENST00000409909 RAB38P57729 211 aa16.58■□□□□ 0.24
LSM5-204ENST00000409909 TUBA3CQ13748 450 aa16.58■□□□□ 0.24
LSM5-204ENST00000409909 NAA30Q147X3 362 aaPredicted RBP16.58■□□□□ 0.24
LSM5-204ENST00000409909 MEP1AQ16819 746 aa16.58■□□□□ 0.24
LSM5-204ENST00000409909 TUBA3EQ6PEY2 450 aa16.58■□□□□ 0.24
LSM5-204ENST00000409909 FAM180AQ6UWF9 173 aa16.58■□□□□ 0.24
LSM5-204ENST00000409909 TEX9Q8N6V9 391 aa16.58■□□□□ 0.24
LSM5-204ENST00000409909 BCORP1Q8N888 145 aa16.58■□□□□ 0.24
LSM5-204ENST00000409909 OR7G3Q8NG95 312 aa16.58■□□□□ 0.24
LSM5-204ENST00000409909 UHMK1Q8TAS1 419 aaKnown RBP16.58■□□□□ 0.24
LSM5-204ENST00000409909 DCAKDQ8WVC6 231 aa16.58■□□□□ 0.24
LSM5-204ENST00000409909 ISL2Q96A47 359 aa16.58■□□□□ 0.24
LSM5-204ENST00000409909 SERINC2Q96SA4 455 aa16.58■□□□□ 0.24
LSM5-204ENST00000409909 PAFAH2Q99487 392 aa16.58■□□□□ 0.24
LSM5-204ENST00000409909 SLX1AQ9BQ83 275 aa16.58■□□□□ 0.24
LSM5-204ENST00000409909 MS4A8Q9BY19 250 aa16.58■□□□□ 0.24
LSM5-204ENST00000409909 VPS11Q9H270 941 aa16.58■□□□□ 0.24
LSM5-204ENST00000409909 KCMF1Q9P0J7 381 aa16.58■□□□□ 0.24
LSM5-204ENST00000409909 ERRFI1Q9UJM3 462 aaPredicted RBP16.58■□□□□ 0.24
LSM5-204ENST00000409909 MMACHCQ9Y4U1 282 aa16.58■□□□□ 0.24
LSM5-204ENST00000409909 A0A088AWK7 358 aa16.57■□□□□ 0.24
LSM5-204ENST00000409909 SAGE2PA6NJ88 616 aa16.57■□□□□ 0.24
LSM5-204ENST00000409909 PRAMEF2O60811 474 aa16.57■□□□□ 0.24
LSM5-204ENST00000409909 SH3BGRLO75368 114 aa16.57■□□□□ 0.24
LSM5-204ENST00000409909 INHBAP08476 426 aa16.57■□□□□ 0.24
LSM5-204ENST00000409909 GFAPP14136 432 aa16.57■□□□□ 0.24
LSM5-204ENST00000409909 EDN3P14138 238 aa16.57■□□□□ 0.24
LSM5-204ENST00000409909 ZNF10P21506 573 aaPredicted RBP16.57■□□□□ 0.24
LSM5-204ENST00000409909 PPP2R1BP30154 601 aa16.57■□□□□ 0.24
LSM5-204ENST00000409909 HPDP32754 393 aaPredicted RBP16.57■□□□□ 0.24
LSM5-204ENST00000409909 CD96P40200 585 aa16.57■□□□□ 0.24
LSM5-204ENST00000409909 ALDH18A1P54886 795 aaKnown RBP16.57■□□□□ 0.24
LSM5-204ENST00000409909 MTTPP55157 894 aa16.57■□□□□ 0.24
LSM5-204ENST00000409909 SRSF11Q05519 484 aaKnown RBP16.57■□□□□ 0.24
LSM5-204ENST00000409909 TECRLQ5HYJ1 363 aa16.57■□□□□ 0.24
LSM5-204ENST00000409909 MED27Q6P2C8 311 aa16.57■□□□□ 0.24
LSM5-204ENST00000409909 ZNF793Q6ZN11 406 aa16.57■□□□□ 0.24
LSM5-204ENST00000409909 RNF175Q8N4F7 328 aa16.57■□□□□ 0.24
LSM5-204ENST00000409909 FAM47BQ8NA70 645 aa16.57■□□□□ 0.24
LSM5-204ENST00000409909 SSC4DQ8WTU2 575 aa16.57■□□□□ 0.24
LSM5-204ENST00000409909 SIGLEC12Q96PQ1 595 aa16.57■□□□□ 0.24
LSM5-204ENST00000409909 CSF3RQ99062 836 aa16.57■□□□□ 0.24
LSM5-204ENST00000409909 CDCP1Q9H5V8 836 aa16.57■□□□□ 0.24
LSM5-204ENST00000409909 OLAHQ9NV23 265 aa16.57■□□□□ 0.24
LSM5-204ENST00000409909 ANKRD10Q9NXR5 420 aa16.57■□□□□ 0.24
LSM5-204ENST00000409909 NFU1Q9UMS0 254 aa16.57■□□□□ 0.24
LSM5-204ENST00000409909 DAPP1Q9UN19 280 aa16.57■□□□□ 0.24
LSM5-204ENST00000409909 NBPF19A0A087WUL8 3843 aa16.57■□□□□ 0.24
LSM5-204ENST00000409909 CENPEQ02224 2701 aa16.56■□□□□ 0.24
LSM5-204ENST00000409909 RTCAO00442 366 aaKnown RBP16.56■□□□□ 0.24
LSM5-204ENST00000409909 SIX3O95343 332 aaPredicted RBP16.56■□□□□ 0.24
LSM5-204ENST00000409909 TGFB1P01137 390 aa16.56■□□□□ 0.24
LSM5-204ENST00000409909 PCNAP12004 261 aa16.56■□□□□ 0.24
LSM5-204ENST00000409909 ATP5A1P25705 553 aaKnown RBP16.56■□□□□ 0.24
LSM5-204ENST00000409909 HSD17B7P56937 341 aa16.56■□□□□ 0.24
LSM5-204ENST00000409909 ELOAQ14241 798 aaKnown RBP16.56■□□□□ 0.24
LSM5-204ENST00000409909 PCBP2Q15366 365 aaKnown RBP eCLIP16.56■□□□□ 0.24
LSM5-204ENST00000409909 INAQ16352 499 aa16.56■□□□□ 0.24
LSM5-204ENST00000409909 GRHL2Q6ISB3 625 aa16.56■□□□□ 0.24
LSM5-204ENST00000409909 KLC3Q6P597 504 aa16.56■□□□□ 0.24
LSM5-204ENST00000409909 SLC5A8Q8N695 610 aa16.56■□□□□ 0.24
LSM5-204ENST00000409909 MDS2Q8NDY4 140 aa16.56■□□□□ 0.24
LSM5-204ENST00000409909 ARMC2Q8NEN0 867 aa16.56■□□□□ 0.24
LSM5-204ENST00000409909 UBE2E3Q969T4 207 aa16.56■□□□□ 0.24
LSM5-204ENST00000409909 KCNC2Q96PR1 638 aa16.56■□□□□ 0.24
LSM5-204ENST00000409909 PRTFDC1Q9NRG1 225 aa16.56■□□□□ 0.24
LSM5-204ENST00000409909 CPSF2Q9P2I0 782 aaKnown RBP16.56■□□□□ 0.24
LSM5-204ENST00000409909 WIPF3A6NGB9 483 aa16.55■□□□□ 0.24
LSM5-204ENST00000409909 GABRR3A8MPY1 467 aa16.55■□□□□ 0.24
LSM5-204ENST00000409909 POC1B-GALNT4F8VUJ3 575 aa16.55■□□□□ 0.24
LSM5-204ENST00000409909 SAP18O00422 153 aaKnown RBP16.55■□□□□ 0.24
LSM5-204ENST00000409909 MYO1DO94832 1006 aa16.55■□□□□ 0.24
LSM5-204ENST00000409909 GP1BBP13224 206 aa16.55■□□□□ 0.24
LSM5-204ENST00000409909 SERPINB9P50453 376 aa16.55■□□□□ 0.24
LSM5-204ENST00000409909 TDGF1P3P51864 188 aa16.55■□□□□ 0.24
LSM5-204ENST00000409909 TAS2R50P59544 299 aa16.55■□□□□ 0.24
LSM5-204ENST00000409909 TGM3Q08188 693 aa16.55■□□□□ 0.24
LSM5-204ENST00000409909 SLC13A2Q13183 592 aa16.55■□□□□ 0.24
LSM5-204ENST00000409909 TMEM35AQ53FP2 167 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms