RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 A0A1B0GX78 115 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 ARHGAP10A1A4S6 786 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 SAP18O00422 153 aaKnown RBP15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 DSCR3O14972 297 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 RAD1O60671 282 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 PEX11AO75192 247 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 ZIC2O95409 532 aaPredicted RBP15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 NSA2O95478 260 aaKnown RBP15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 LBPP18428 481 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 DRD4P21917 467 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 MAPK1P28482 360 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 EPHA3P29320 983 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 GCGRP47871 477 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 RAB8AP61006 207 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 CXADRP78310 365 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 BTN3A2P78410 334 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 TBL3Q12788 808 aaKnown RBP15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 GALNTL6Q49A17 601 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 SLC9B1Q4ZJI4 515 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 VWA5B1Q5TIE3 1220 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 PRMT9Q6P2P2 845 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 TTLL10Q6ZVT0 673 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 TIPARPQ7Z3E1 657 aaKnown RBP15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 COMMD6Q7Z4G1 85 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 CACNA2D3Q8IZS8 1091 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 NLGN4XQ8N0W4 816 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 C1orf52Q8N6N3 182 aaKnown RBP15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 NLGN4YQ8NFZ3 816 aaPredicted RBP15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 RFWD2Q8NHY2 731 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 PROKR1Q8TCW9 393 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 SNRNP27Q8WVK2 155 aaKnown RBP15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 COL26A1Q96A83 441 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 CLIP3Q96DZ5 547 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 THOC1Q96FV9 657 aaKnown RBP15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 SERINC2Q96SA4 455 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 CCDC28BQ9BUN5 200 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 ULBP3Q9BZM4 244 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 AICDAQ9GZX7 198 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 AKTIPQ9H8T0 292 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 CLK4Q9HAZ1 481 aaKnown RBP15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 TCF7L2Q9NQB0 619 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 NDOR1Q9UHB4 597 aa15.66■□□□□ 0.1
TSPAN4-208ENST00000409531 GOLGA8QA0A0J9YX86 632 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 GOLGA8OA6NCC3 632 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 GOLGA8NF8WBI6 632 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 H0YIG0 161 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 K7ENP7 123 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 GALR3O60755 368 aaPredicted RBP15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 SCELO95171 688 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 DLGAP3O95886 979 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 ACPPP15309 386 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 PCSK2P16519 638 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 ZNF28P17035 718 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 IL1RNP18510 177 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 HIST1H1TP22492 207 aaPredicted RBP15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 ALAS2P22557 587 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 ATP5A1P25705 553 aaKnown RBP15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 BSGP35613 385 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 IDH3AP50213 366 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 ARFIP2P53365 341 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 MTTPP55157 894 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 ERVK-8P63133 956 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 RPL38P63173 70 aaKnown RBP15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 MAP7Q14244 749 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 DEFB134Q4QY38 66 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 C6orf136Q5SQH8 315 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 ARHGAP40Q5TG30 622 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 NXNQ6DKJ4 435 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 OGFOD2Q6N063 350 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 CGB2Q6NT52 195 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 GALNT18Q6P9A2 607 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 INO80CQ6PI98 192 aaPredicted RBP15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 LARP4Q71RC2 724 aaKnown RBP eCLIP15.65■□□□□ 0.18e-7■■■■■ 32.5
TSPAN4-208ENST00000409531 SPATA21Q7Z572 469 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 UBE3DQ7Z6J8 389 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 FNDC5Q8NAU1 212 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 APIPQ96GX9 242 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 LRFN5Q96NI6 719 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 WDR55Q9H6Y2 383 aaPredicted RBP15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 DDX31Q9H8H2 851 aaKnown RBP15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 PRDM7Q9NQW5 492 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 NOP53Q9NZM5 478 aaKnown RBP15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 MCM8Q9UJA3 840 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 NAALAD2Q9Y3Q0 740 aa15.65■□□□□ 0.1
TSPAN4-208ENST00000409531 FER1L5A0AVI2 2057 aa15.64■□□□□ 0.09
TSPAN4-208ENST00000409531 RTCAO00442 366 aaKnown RBP15.64■□□□□ 0.09
TSPAN4-208ENST00000409531 B3GALT2O43825 422 aa15.64■□□□□ 0.09
TSPAN4-208ENST00000409531 KIAA0754O94854 1291 aa15.64■□□□□ 0.09
TSPAN4-208ENST00000409531 KLHL18O94889 574 aa15.64■□□□□ 0.09
TSPAN4-208ENST00000409531 TIAF1O95411 115 aa15.64■□□□□ 0.09
TSPAN4-208ENST00000409531 FAM107AO95990 144 aa15.64■□□□□ 0.09
TSPAN4-208ENST00000409531 PRR35P0CG20 571 aa15.64■□□□□ 0.09
TSPAN4-208ENST00000409531 TIA1P31483 386 aaKnown RBP eCLIP15.64■□□□□ 0.091e-7■□□□□ 8.4
TSPAN4-208ENST00000409531 GSTM5P46439 218 aa15.64■□□□□ 0.09
TSPAN4-208ENST00000409531 EMX2Q04743 252 aa15.64■□□□□ 0.09
TSPAN4-208ENST00000409531 ABHD18Q0P651 414 aa15.64■□□□□ 0.09
TSPAN4-208ENST00000409531 SRSF6Q13247 344 aaKnown RBP15.64■□□□□ 0.09
TSPAN4-208ENST00000409531 SLC9A5Q14940 896 aa15.64■□□□□ 0.09
TSPAN4-208ENST00000409531 KIAA0040Q15053 153 aa15.64■□□□□ 0.09
TSPAN4-208ENST00000409531 CCNYL2Q5T2Q4 361 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms