RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 APOFQ13790 326 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 SLC5A12Q1EHB4 618 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 TMEM35AQ53FP2 167 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 RNF130Q86XS8 419 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 MSANTD3Q96H12 275 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 OSBPL10Q9BXB5 764 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 ABCG4Q9H172 646 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 DDX31Q9H8H2 851 aaKnown RBP19.73■□□□□ 0.75
USP39-203ENST00000409470 POLMQ9NP87 494 aaPredicted RBP19.73■□□□□ 0.75
USP39-203ENST00000409470 ADPRHL2Q9NX46 363 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 OR6C2Q9NZP2 312 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 ZNF624Q9P2J8 865 aaPredicted RBP19.73■□□□□ 0.75
USP39-203ENST00000409470 ABCG2Q9UNQ0 655 aa19.73■□□□□ 0.75
USP39-203ENST00000409470 PLXND1Q9Y4D7 1925 aa19.72■□□□□ 0.75
USP39-203ENST00000409470 H0YAE9 185 aa19.72■□□□□ 0.75
USP39-203ENST00000409470 hCG_2039718K7EN88 272 aa19.72■□□□□ 0.75
USP39-203ENST00000409470 PDPK1O15530 556 aa19.72■□□□□ 0.75
USP39-203ENST00000409470 NOBOXO60393 691 aa19.72■□□□□ 0.75
USP39-203ENST00000409470 CHRM5P08912 532 aaPredicted RBP19.72■□□□□ 0.75
USP39-203ENST00000409470 GSTM5P46439 218 aa19.72■□□□□ 0.75
USP39-203ENST00000409470 MANFP55145 182 aaKnown RBP19.72■□□□□ 0.75
USP39-203ENST00000409470 FADDQ13158 208 aa19.72■□□□□ 0.75
USP39-203ENST00000409470 SMAD4Q13485 552 aaKnown RBP19.72■□□□□ 0.75
USP39-203ENST00000409470 ALG11Q2TAA5 492 aa19.72■□□□□ 0.75
USP39-203ENST00000409470 Q6ZSR6 202 aa19.72■□□□□ 0.75
USP39-203ENST00000409470 TMEM179BQ7Z7N9 219 aa19.72■□□□□ 0.75
USP39-203ENST00000409470 PATL1Q86TB9 770 aaKnown RBP19.72■□□□□ 0.75
USP39-203ENST00000409470 NATD1Q8N6N6 113 aa19.72■□□□□ 0.75
USP39-203ENST00000409470 NLNQ9BYT8 704 aa19.72■□□□□ 0.75
USP39-203ENST00000409470 GRIP2Q9C0E4 1043 aa19.72■□□□□ 0.75
USP39-203ENST00000409470 PNMA8BQ9ULN7 279 aaPredicted RBP19.72■□□□□ 0.75
USP39-203ENST00000409470 SUV39H1O43463 412 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 TBX19O60806 448 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 TNFRSF21O75509 655 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 PABPC4LP0CB38 370 aaKnown RBP19.71■□□□□ 0.75
USP39-203ENST00000409470 HOXB3P14651 431 aaPredicted RBP19.71■□□□□ 0.75
USP39-203ENST00000409470 UQCRC2P22695 453 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 BIRC2Q13490 618 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 KIAA1614Q5VZ46 1190 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 OR2T5Q6IEZ7 315 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 Q6ZS52 159 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 HIPK1Q86Z02 1210 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 AMER3Q8N944 861 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 OR2T29Q8NH02 315 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 EXOSC8Q96B26 276 aaKnown RBP19.71■□□□□ 0.75
USP39-203ENST00000409470 RDH12Q96NR8 316 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 TEFMQ96QE5 360 aaKnown RBP19.71■□□□□ 0.75
USP39-203ENST00000409470 MACROD1Q9BQ69 325 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 TMEM121BQ9BXQ6 578 aaPredicted RBP19.71■□□□□ 0.75
USP39-203ENST00000409470 SRMSQ9H3Y6 488 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 KLHL31Q9H511 634 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 C6orf106Q9H6K1 298 aaPredicted RBP19.71■□□□□ 0.75
USP39-203ENST00000409470 USP36Q9P275 1121 aaKnown RBP19.71■□□□□ 0.75
USP39-203ENST00000409470 C5AR2Q9P296 337 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 PCOLCE2Q9UKZ9 415 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 KLHL20Q9Y2M5 609 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 PPM1DO15297 605 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 SEMG1P04279 462 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 PPP2R2BQ00005 443 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 RBBP4Q09028 425 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 SCARB2Q14108 478 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 ZIC1Q15915 447 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 OR5P2Q8WZ92 322 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 TRIM4Q9C037 500 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 CXorf36Q9H7Y0 433 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 TM9SF3Q9HD45 589 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 TEX10Q9NXF1 929 aaPredicted RBP19.71■□□□□ 0.75
USP39-203ENST00000409470 USE1Q9NZ43 259 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 SNX7Q9UNH6 387 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 HS3ST3A1Q9Y663 406 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 AP1M2Q9Y6Q5 423 aa19.71■□□□□ 0.75
USP39-203ENST00000409470 A0A0A6YYD5 115 aa19.7■□□□□ 0.74
USP39-203ENST00000409470 MYO1GB0I1T2 1018 aa19.7■□□□□ 0.74
USP39-203ENST00000409470 AXIN1O15169 862 aa19.7■□□□□ 0.74
USP39-203ENST00000409470 HS6ST1O60243 411 aa19.7■□□□□ 0.74
USP39-203ENST00000409470 PRKACGP22612 351 aa19.7■□□□□ 0.74
USP39-203ENST00000409470 PAX7P23759 505 aa19.7■□□□□ 0.74
USP39-203ENST00000409470 GSTM2P28161 218 aa19.7■□□□□ 0.74
USP39-203ENST00000409470 AHRP35869 848 aa19.7■□□□□ 0.74
USP39-203ENST00000409470 NFKBIDQ8NI38 313 aa19.7■□□□□ 0.74
USP39-203ENST00000409470 PHF7Q9BWX1 381 aaPredicted RBP19.7■□□□□ 0.74
USP39-203ENST00000409470 AICDAQ9GZX7 198 aa19.7■□□□□ 0.74
USP39-203ENST00000409470 TOR3AQ9H497 397 aa19.7■□□□□ 0.74
USP39-203ENST00000409470 SLAMF7Q9NQ25 335 aa19.7■□□□□ 0.74
USP39-203ENST00000409470 C1GALT1Q9NS00 363 aa19.7■□□□□ 0.74
USP39-203ENST00000409470 VNN3Q9NY84 501 aa19.7■□□□□ 0.74
USP39-203ENST00000409470 IFT80Q9P2H3 777 aaPredicted RBP19.7■□□□□ 0.74
USP39-203ENST00000409470 CYP8B1Q9UNU6 501 aa19.7■□□□□ 0.74
USP39-203ENST00000409470 SMIM31A0A1B0GVY4 71 aa19.69■□□□□ 0.74
USP39-203ENST00000409470 ERI3O43414 337 aaKnown RBP19.69■□□□□ 0.74
USP39-203ENST00000409470 DIRAS1O95057 198 aa19.69■□□□□ 0.74
USP39-203ENST00000409470 F3P13726 295 aa19.69■□□□□ 0.74
USP39-203ENST00000409470 SLC19A1P41440 591 aa19.69■□□□□ 0.74
USP39-203ENST00000409470 ARHGDIAP52565 204 aa19.69■□□□□ 0.74
USP39-203ENST00000409470 TRA2BP62995 288 aaKnown RBP19.69■□□□□ 0.74
USP39-203ENST00000409470 VLDLRP98155 873 aa19.69■□□□□ 0.74
USP39-203ENST00000409470 PLCL1Q15111 1095 aa19.69■□□□□ 0.74
USP39-203ENST00000409470 SHQ1Q6PI26 577 aaKnown RBP19.69■□□□□ 0.74
USP39-203ENST00000409470 TMEM26Q6ZUK4 368 aa19.69■□□□□ 0.74
USP39-203ENST00000409470 USP51Q70EK9 711 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms