RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 POLD2P49005 469 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 NDUFV1P49821 464 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 SLC7A2P52569 658 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 ARSFP54793 590 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 SLC12A2P55011 1212 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 CXCR4P61073 352 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 RPS7P62081 194 aaKnown RBP5.25□□□□□ -1.57
CLK1-202ENST00000409403 DYNLT1P63172 113 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 CXADRP78310 365 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 SHC2P98077 582 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 RHAGQ02094 409 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 RUNX1T1Q06455 604 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.25□□□□□ -1.57
CLK1-202ENST00000409403 DYRK1AQ13627 763 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 HLXQ14774 488 aaPredicted RBP5.25□□□□□ -1.57
CLK1-202ENST00000409403 CARTPTQ16568 116 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 CA9Q16790 459 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 UGP2Q16851 508 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 TMEM95Q3KNT9 176 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 ADPRMQ3LIE5 342 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 ZIK1Q3SY52 487 aaPredicted RBP5.25□□□□□ -1.57
CLK1-202ENST00000409403 KLHL12Q53G59 568 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 COLEC12Q5KU26 742 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 TPRG1LQ5T0D9 272 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 C1orf220Q5T0J3 134 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 ARMC4Q5T2S8 1044 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 SYT6Q5T7P8 510 aaPredicted RBP5.25□□□□□ -1.57
CLK1-202ENST00000409403 PXDC1Q5TGL8 231 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 B3GNTL1Q67FW5 361 aaPredicted RBP5.25□□□□□ -1.57
CLK1-202ENST00000409403 TATDN1Q6P1N9 297 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 ARSKQ6UWY0 536 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 GDPD3Q7L5L3 318 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 PIWIL4Q7Z3Z4 852 aaKnown RBP5.25□□□□□ -1.57
CLK1-202ENST00000409403 PTAR1Q7Z6K3 402 aaPredicted RBP5.25□□□□□ -1.57
CLK1-202ENST00000409403 MICU2Q8IYU8 434 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 LINC00518Q8N0U6 118 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 PELI3Q8N2H9 469 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 STX19Q8N4C7 294 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 MINDY1Q8N5J2 469 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 AADATQ8N5Z0 425 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 PCDH20Q8N6Y1 951 aaKnown RBP5.25□□□□□ -1.57
CLK1-202ENST00000409403 KCTD6Q8NC69 237 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 CHST13Q8NET6 341 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 MAPK15Q8TD08 544 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 SLC7A6Q92536 515 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 RPL3LQ92901 407 aaKnown RBP5.25□□□□□ -1.57
CLK1-202ENST00000409403 PABPC5Q96DU9 382 aaKnown RBP5.25□□□□□ -1.57
CLK1-202ENST00000409403 MUS81Q96NY9 551 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 OPALINQ96PE5 141 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 MCEEQ96PE7 176 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 SECISBP2Q96T21 854 aaKnown RBP5.25□□□□□ -1.57
CLK1-202ENST00000409403 PTDSS2Q9BVG9 487 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 GTPBP2Q9BX10 602 aaKnown RBP5.25□□□□□ -1.57
CLK1-202ENST00000409403 NXF2Q9GZY0 626 aaKnown RBP5.25□□□□□ -1.57
CLK1-202ENST00000409403 SLC22A4Q9H015 551 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 FAM83DQ9H4H8 585 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 WDR55Q9H6Y2 383 aaPredicted RBP5.25□□□□□ -1.57
CLK1-202ENST00000409403 NMRAL1Q9HBL8 299 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 SMYD2Q9NRG4 433 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 SNX15Q9NRS6 342 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 PTTG3PQ9NZH4 202 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 TMEM216Q9P0N5 145 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 DKK4Q9UBT3 224 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 MORF4L1Q9UBU8 362 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 C3orf18Q9UK00 162 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 AFG3L2Q9Y4W6 797 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 RIPK3Q9Y572 518 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 AUP1Q9Y679 476 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 WDFY3Q8IZQ1 3526 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 AKAP13Q12802 2813 aa5.25□□□□□ -1.57
CLK1-202ENST00000409403 A0A0G2JMP0 313 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 MYADML2A6NDP7 307 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 CCDC182A6NF36 153 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 TUBAL3A6NHL2 446 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 LOC730098B7Z3J9 87 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 SLC1A7O00341 560 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 GRID2O43424 1007 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 EXTL3O43909 919 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 OR5F1O95221 314 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 PIGNO95427 931 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 FTH1P02794 183 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 HLA-DOAP06340 250 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 CYP3A4P08684 503 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 SUPT20HL2P0C7V6 817 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 TCF4P15884 667 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 HLA-DMAP28067 261 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 ELK4P28324 431 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 AXLP30530 894 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 UQCRC1P31930 480 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 RYKP34925 604 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 MAGEA11P43364 429 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 DGKEP52429 567 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 CCL23P55773 120 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 CSNK2BP67870 215 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 GTF2BQ00403 316 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 SLC25A11Q02978 314 aaKnown RBP5.24□□□□□ -1.57
CLK1-202ENST00000409403 GBE1Q04446 702 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 CYP51A1Q16850 503 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 PFKFB4Q16877 469 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 ZACNQ401N2 412 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms