RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 RGMAQ96B86 450 aa19.16■□□□□ 0.66
PTCD3-202ENST00000409326 TBC1D20Q96BZ9 403 aa19.16■□□□□ 0.66
PTCD3-202ENST00000409326 RBCK1Q9BYM8 510 aa19.16■□□□□ 0.66
PTCD3-202ENST00000409326 BRF2Q9HAW0 419 aa19.16■□□□□ 0.66
PTCD3-202ENST00000409326 FARSBQ9NSD9 589 aaKnown RBP19.16■□□□□ 0.66
PTCD3-202ENST00000409326 MKL2Q9ULH7 1088 aa19.16■□□□□ 0.66
PTCD3-202ENST00000409326 HS3ST3B1Q9Y662 390 aa19.16■□□□□ 0.66
PTCD3-202ENST00000409326 RTCAO00442 366 aaKnown RBP19.15■□□□□ 0.66
PTCD3-202ENST00000409326 MANBAO00462 879 aa19.15■□□□□ 0.66
PTCD3-202ENST00000409326 HEXBP07686 556 aa19.15■□□□□ 0.66
PTCD3-202ENST00000409326 HIST1H1TP22492 207 aaPredicted RBP19.15■□□□□ 0.66
PTCD3-202ENST00000409326 JAK1P23458 1154 aa19.15■□□□□ 0.66
PTCD3-202ENST00000409326 ATP5A1P25705 553 aaKnown RBP19.15■□□□□ 0.66
PTCD3-202ENST00000409326 EFNA3P52797 238 aa19.15■□□□□ 0.66
PTCD3-202ENST00000409326 ZNF33BQ06732 778 aa19.15■□□□□ 0.66
PTCD3-202ENST00000409326 ATP1A4Q13733 1029 aa19.15■□□□□ 0.66
PTCD3-202ENST00000409326 RUNX2Q13950 521 aa19.15■□□□□ 0.66
PTCD3-202ENST00000409326 TBR1Q16650 682 aa19.15■□□□□ 0.66
PTCD3-202ENST00000409326 AP5B1Q2VPB7 878 aa19.15■□□□□ 0.66
PTCD3-202ENST00000409326 MINDY4Q4G0A6 757 aa19.15■□□□□ 0.66
PTCD3-202ENST00000409326 SGO1Q5FBB7 561 aa19.15■□□□□ 0.66
PTCD3-202ENST00000409326 OR4C11Q6IEV9 310 aa19.15■□□□□ 0.66
PTCD3-202ENST00000409326 BORAQ6PGQ7 559 aa19.15■□□□□ 0.66
PTCD3-202ENST00000409326 MED25Q71SY5 747 aa19.15■□□□□ 0.66
PTCD3-202ENST00000409326 ACOT4Q8N9L9 421 aa19.15■□□□□ 0.66
PTCD3-202ENST00000409326 TTC9Q92623 222 aa19.15■□□□□ 0.66
PTCD3-202ENST00000409326 EXTL1Q92935 676 aa19.15■□□□□ 0.66
PTCD3-202ENST00000409326 PKNOX2Q96KN3 472 aa19.15■□□□□ 0.66
PTCD3-202ENST00000409326 KCNA7Q96RP8 456 aa19.15■□□□□ 0.66
PTCD3-202ENST00000409326 ZNF717Q9BY31 904 aaPredicted RBP19.15■□□□□ 0.66
PTCD3-202ENST00000409326 VN1R1Q9GZP7 353 aa19.15■□□□□ 0.66
PTCD3-202ENST00000409326 LANCL2Q9NS86 450 aa19.15■□□□□ 0.66
PTCD3-202ENST00000409326 KCNMB2Q9Y691 235 aa19.15■□□□□ 0.66
PTCD3-202ENST00000409326 TMEM120BA0PK00 339 aa19.14■□□□□ 0.65
PTCD3-202ENST00000409326 PSMD12O00232 456 aaPredicted RBP19.14■□□□□ 0.65
PTCD3-202ENST00000409326 SOCS6O14544 535 aa19.14■□□□□ 0.65
PTCD3-202ENST00000409326 PCDH17O14917 1159 aa19.14■□□□□ 0.65
PTCD3-202ENST00000409326 BIRC5O15392 142 aa19.14■□□□□ 0.65
PTCD3-202ENST00000409326 ULK1O75385 1050 aa19.14■□□□□ 0.65
PTCD3-202ENST00000409326 HSD3B1P14060 373 aa19.14■□□□□ 0.65
PTCD3-202ENST00000409326 HSD3B2P26439 372 aa19.14■□□□□ 0.65
PTCD3-202ENST00000409326 SERPINB5P36952 375 aa19.14■□□□□ 0.65
PTCD3-202ENST00000409326 SLC18A1P54219 525 aa19.14■□□□□ 0.65
PTCD3-202ENST00000409326 FOXA1P55317 472 aa19.14■□□□□ 0.65
PTCD3-202ENST00000409326 RAB38P57729 211 aa19.14■□□□□ 0.65
PTCD3-202ENST00000409326 GALNT1Q10472 559 aaPredicted RBP19.14■□□□□ 0.65
PTCD3-202ENST00000409326 TUBB8Q3ZCM7 444 aa19.14■□□□□ 0.65
PTCD3-202ENST00000409326 MFSD4BQ5TF39 518 aa19.14■□□□□ 0.65
PTCD3-202ENST00000409326 ZCCHC23Q6ZST2 131 aa19.14■□□□□ 0.65
PTCD3-202ENST00000409326 NUDCD3Q8IVD9 361 aa19.14■□□□□ 0.65
PTCD3-202ENST00000409326 OR6Y1Q8NGX8 325 aa19.14■□□□□ 0.65
PTCD3-202ENST00000409326 ADAMTS18Q8TE60 1221 aa19.14■□□□□ 0.65
PTCD3-202ENST00000409326 APOBEC4Q8WW27 367 aaKnown RBP19.14■□□□□ 0.65
PTCD3-202ENST00000409326 ARL8AQ96BM9 186 aa19.14■□□□□ 0.65
PTCD3-202ENST00000409326 SORBS1Q9BX66 1292 aaKnown RBP19.14■□□□□ 0.65
PTCD3-202ENST00000409326 LYRM4Q9HD34 91 aa19.14■□□□□ 0.65
PTCD3-202ENST00000409326 P4HTMQ9NXG6 502 aa19.14■□□□□ 0.65
PTCD3-202ENST00000409326 DAPP1Q9UN19 280 aa19.14■□□□□ 0.65
PTCD3-202ENST00000409326 TIMM22Q9Y584 194 aa19.14■□□□□ 0.65
PTCD3-202ENST00000409326 ERVH48-1M5A8F1 160 aa19.13■□□□□ 0.65
PTCD3-202ENST00000409326 PEX12O00623 359 aa19.13■□□□□ 0.65
PTCD3-202ENST00000409326 ALOX12BO75342 701 aa19.13■□□□□ 0.65
PTCD3-202ENST00000409326 CDC123O75794 336 aaPredicted RBP19.13■□□□□ 0.65
PTCD3-202ENST00000409326 BSGP35613 385 aa19.13■□□□□ 0.65
PTCD3-202ENST00000409326 HTR6P50406 440 aa19.13■□□□□ 0.65
PTCD3-202ENST00000409326 LIM2P55344 173 aa19.13■□□□□ 0.65
PTCD3-202ENST00000409326 CSTF3Q12996 717 aaKnown RBP19.13■□□□□ 0.65
PTCD3-202ENST00000409326 RCN2Q14257 317 aa19.13■□□□□ 0.65
PTCD3-202ENST00000409326 KIRREL2Q6UWL6 708 aa19.13■□□□□ 0.65
PTCD3-202ENST00000409326 CUZD1Q86UP6 607 aa19.13■□□□□ 0.65
PTCD3-202ENST00000409326 APLFQ8IW19 511 aaPredicted RBP19.13■□□□□ 0.65
PTCD3-202ENST00000409326 ZCCHC7Q8N3Z6 543 aaKnown RBP19.13■□□□□ 0.65
PTCD3-202ENST00000409326 TMEM102Q8N9M5 508 aaPredicted RBP19.13■□□□□ 0.65
PTCD3-202ENST00000409326 VPS50Q96JG6 964 aa19.13■□□□□ 0.65
PTCD3-202ENST00000409326 HBEGFQ99075 208 aa19.13■□□□□ 0.65
PTCD3-202ENST00000409326 SH3GL2Q99962 352 aa19.13■□□□□ 0.65
PTCD3-202ENST00000409326 SHCBP1LQ9BZQ2 653 aa19.13■□□□□ 0.65
PTCD3-202ENST00000409326 TNFRSF12AQ9NP84 129 aa19.13■□□□□ 0.65
PTCD3-202ENST00000409326 SLC12A4Q9UP95 1085 aa19.13■□□□□ 0.65
PTCD3-202ENST00000409326 DOCK10Q96BY6 2186 aa19.13■□□□□ 0.65
PTCD3-202ENST00000409326 UQCRHLA0A096LP55 91 aa19.12■□□□□ 0.65
PTCD3-202ENST00000409326 SERTM1A2A2V5 107 aa19.12■□□□□ 0.65
PTCD3-202ENST00000409326 ARGFXA6NJG6 315 aa19.12■□□□□ 0.65
PTCD3-202ENST00000409326 CRCPO75575 148 aa19.12■□□□□ 0.65
PTCD3-202ENST00000409326 CHRNGP07510 517 aa19.12■□□□□ 0.65
PTCD3-202ENST00000409326 UQCRHP07919 91 aa19.12■□□□□ 0.65
PTCD3-202ENST00000409326 C8orf89P0DMQ9 161 aa19.12■□□□□ 0.65
PTCD3-202ENST00000409326 RHAGQ02094 409 aa19.12■□□□□ 0.65
PTCD3-202ENST00000409326 LINC00303Q3SY05 128 aa19.12■□□□□ 0.65
PTCD3-202ENST00000409326 TMEM205Q6UW68 189 aa19.12■□□□□ 0.65
PTCD3-202ENST00000409326 QSOX2Q6ZRP7 698 aa19.12■□□□□ 0.65
PTCD3-202ENST00000409326 NUDT13Q86X67 352 aa19.12■□□□□ 0.65
PTCD3-202ENST00000409326 GBP7Q8N8V2 638 aaPredicted RBP19.12■□□□□ 0.65
PTCD3-202ENST00000409326 ANKRD42Q8N9B4 389 aa19.12■□□□□ 0.65
PTCD3-202ENST00000409326 PLPP5Q8NEB5 264 aa19.12■□□□□ 0.65
PTCD3-202ENST00000409326 ATP6V1G3Q96LB4 118 aa19.12■□□□□ 0.65
PTCD3-202ENST00000409326 FER1L6-AS2Q96M78 137 aa19.12■□□□□ 0.65
PTCD3-202ENST00000409326 DDX31Q9H8H2 851 aaKnown RBP19.12■□□□□ 0.65
PTCD3-202ENST00000409326 EML4Q9HC35 981 aaKnown RBP19.12■□□□□ 0.65
PTCD3-202ENST00000409326 NMRK1Q9NWW6 199 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms