RNA–Protein interactions for RNA: ENST00000408749.1

RNU6ATAC-201, Transcript of RNA, U6atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU6ATAC, Length 126 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC-201ENST00000408749 CD68P34810 354 aaPredicted RBP3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 SRP14P37108 136 aaKnown RBP3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 CD79BP40259 229 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 MASP1P48740 699 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 TRPC1P48995 793 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 CDKN1CP49918 316 aaPredicted RBP3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 GPR143P51810 404 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 NR0B1P51843 470 aaKnown RBP3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 NUDT6P53370 316 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 PNLIPRP1P54315 467 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 EIF3BP55884 814 aaKnown RBP3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 WNT3P56703 355 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 RPP38P78345 283 aaKnown RBP3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 SRSF2Q01130 221 aaKnown RBP3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 CRYZQ08257 329 aaKnown RBP3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 LOXL1Q08397 574 aaPredicted RBP3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 KLHL30Q0D2K2 578 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 HYAL2Q12891 473 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 MSLNQ13421 630 aaPredicted RBP3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 GRB7Q14451 532 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 FGFBP1Q14512 234 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 KRT31Q15323 416 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 ZNF750Q32MQ0 723 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 PRR31Q5SQ13 230 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 FAM120AOSQ5T036 256 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 OR2A2Q6IF42 318 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 POMZP3Q6PJE2 187 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 AFTPHQ6ULP2 937 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 ENPP6Q6UWR7 440 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 PRSS41Q7RTY9 318 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 P4HA3Q7Z4N8 544 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 LDB1Q86U70 411 aaPredicted RBP3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 GRAMD2AQ8IUY3 354 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 VRK3Q8IV63 474 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 ZNF567Q8N184 647 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 PLD6Q8N2A8 252 aaKnown RBP3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 DEPDC4Q8N2C3 294 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 LRRC25Q8N386 305 aaPredicted RBP3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 ARHGEF39Q8N4T4 335 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 APCDD1LQ8NCL9 501 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 C7orf57Q8NEG2 295 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 NFAM1Q8NET5 270 aaPredicted RBP3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 RAPGEF5Q92565 580 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 P3H4Q92791 437 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 DAZLQ92904 295 aaKnown RBP3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 GCDHQ92947 438 aaPredicted RBP3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 FBXW5Q969U6 566 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 ZC3HAV1LQ96H79 300 aaKnown RBP3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 CDKN2AIPNLQ96HQ2 116 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 LCORQ96JN0 433 aaPredicted RBP3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 BTBD6Q96KE9 485 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 SCYL1Q96KG9 808 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 ADAD1Q96M93 576 aaKnown RBP3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 WFIKKN1Q96NZ8 548 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 HS3ST6Q96QI5 342 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 TNFRSF13CQ96RJ3 184 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 TIMP4Q99727 224 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 APOL2Q9BQE5 337 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 DOHHQ9BU89 302 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 PCBD2Q9H0N5 130 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 ISCUQ9H1K1 167 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 HAUS4Q9H6D7 363 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 ADAP2Q9NPF8 381 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 PNO1Q9NRX1 252 aaKnown RBP3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 ABCF3Q9NUQ8 709 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 TMEM184CQ9NVA4 438 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 DNAJC11Q9NVH1 559 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 DDX56Q9NY93 547 aaKnown RBP3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 CNIH4Q9P003 139 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 MAPRE3Q9UPY8 281 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 MRPS33Q9Y291 106 aaKnown RBP3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 VPS9D1Q9Y2B5 631 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 SNX8Q9Y5X2 465 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 PRSS21Q9Y6M0 314 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 CLCA3PQ9Y6N3 262 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 EML6Q6ZMW3 1958 aa3.54□□□□□ -1.84
RNU6ATAC-201ENST00000408749 ARID1AO14497 2285 aa3.53□□□□□ -1.84
RNU6ATAC-201ENST00000408749 KCNE1BA0A087WTH5 132 aa3.53□□□□□ -1.84
RNU6ATAC-201ENST00000408749 A0A088AWK7 358 aa3.53□□□□□ -1.84
RNU6ATAC-201ENST00000408749 IGKV1-8A0A0C4DH67 115 aa3.53□□□□□ -1.84
RNU6ATAC-201ENST00000408749 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.53□□□□□ -1.84
RNU6ATAC-201ENST00000408749 PABPN1LA6NDY0 278 aaKnown RBP3.53□□□□□ -1.84
RNU6ATAC-201ENST00000408749 LRRC53A6NM62 1247 aa3.53□□□□□ -1.84
RNU6ATAC-201ENST00000408749 FAM157AC9JC47 383 aa3.53□□□□□ -1.84
RNU6ATAC-201ENST00000408749 CCL22O00626 93 aa3.53□□□□□ -1.84
RNU6ATAC-201ENST00000408749 PRMT5O14744 637 aaPredicted RBP3.53□□□□□ -1.84
RNU6ATAC-201ENST00000408749 NDUFS4O43181 175 aa3.53□□□□□ -1.84
RNU6ATAC-201ENST00000408749 SIAH2O43255 324 aa3.53□□□□□ -1.84
RNU6ATAC-201ENST00000408749 CHST10O43529 356 aa3.53□□□□□ -1.84
RNU6ATAC-201ENST00000408749 CEP104O60308 925 aa3.53□□□□□ -1.84
RNU6ATAC-201ENST00000408749 GALR3O60755 368 aaPredicted RBP3.53□□□□□ -1.84
RNU6ATAC-201ENST00000408749 CDH16O75309 829 aa3.53□□□□□ -1.84
RNU6ATAC-201ENST00000408749 PROSCO94903 275 aa3.53□□□□□ -1.84
RNU6ATAC-201ENST00000408749 RCBTB2O95199 551 aa3.53□□□□□ -1.84
RNU6ATAC-201ENST00000408749 SYF2O95926 243 aaKnown RBP3.53□□□□□ -1.84
RNU6ATAC-201ENST00000408749 SERPINC1P01008 464 aa3.53□□□□□ -1.84
RNU6ATAC-201ENST00000408749 IFNA16P05015 189 aa3.53□□□□□ -1.84
RNU6ATAC-201ENST00000408749 SERPIND1P05546 499 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms