RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 FOXS1O43638 330 aa19.4■□□□□ 0.7
CHKB-201ENST00000406938 B3GALT2O43825 422 aa19.4■□□□□ 0.7
CHKB-201ENST00000406938 KRT34O76011 436 aa19.4■□□□□ 0.7
CHKB-201ENST00000406938 CSRP1P21291 193 aaKnown RBP19.4■□□□□ 0.7
CHKB-201ENST00000406938 GSTM5P46439 218 aa19.4■□□□□ 0.7
CHKB-201ENST00000406938 GCGRP47871 477 aa19.4■□□□□ 0.7
CHKB-201ENST00000406938 POLR2JP52435 117 aaKnown RBP19.4■□□□□ 0.7
CHKB-201ENST00000406938 CLNS1AP54105 237 aaKnown RBP19.4■□□□□ 0.7
CHKB-201ENST00000406938 HNRNPH2P55795 449 aaKnown RBP19.4■□□□□ 0.7
CHKB-201ENST00000406938 C21orf58P58505 322 aa19.4■□□□□ 0.7
CHKB-201ENST00000406938 TRA2BP62995 288 aaKnown RBP19.4■□□□□ 0.7
CHKB-201ENST00000406938 FAM53BQ14153 422 aa19.4■□□□□ 0.7
CHKB-201ENST00000406938 FAM71E1Q6IPT2 247 aa19.4■□□□□ 0.7
CHKB-201ENST00000406938 BMPERQ8N8U9 685 aa19.4■□□□□ 0.7
CHKB-201ENST00000406938 TM4SF18Q96CE8 201 aa19.4■□□□□ 0.7
CHKB-201ENST00000406938 LYARQ9NX58 379 aaKnown RBP19.4■□□□□ 0.7
CHKB-201ENST00000406938 RARRES3Q9UL19 164 aa19.4■□□□□ 0.7
CHKB-201ENST00000406938 SGK494L7N484 410 aa19.39■□□□□ 0.69
CHKB-201ENST00000406938 SCAMP2O15127 329 aaKnown RBP19.39■□□□□ 0.69
CHKB-201ENST00000406938 PRMT3O60678 531 aa19.39■□□□□ 0.69
CHKB-201ENST00000406938 FTH1P19P0C7X4 201 aa19.39■□□□□ 0.69
CHKB-201ENST00000406938 COX4I1P13073 169 aa19.39■□□□□ 0.69
CHKB-201ENST00000406938 PRDX6P30041 224 aa19.39■□□□□ 0.69
CHKB-201ENST00000406938 HPCAL1P37235 193 aa19.39■□□□□ 0.69
CHKB-201ENST00000406938 KCNK10P57789 538 aa19.39■□□□□ 0.69
CHKB-201ENST00000406938 OLR1P78380 273 aa19.39■□□□□ 0.69
CHKB-201ENST00000406938 KLC1Q07866 573 aa19.39■□□□□ 0.69
CHKB-201ENST00000406938 MAPRE2Q15555 327 aa19.39■□□□□ 0.69
CHKB-201ENST00000406938 ISXQ2M1V0 245 aa19.39■□□□□ 0.69
CHKB-201ENST00000406938 FAM214AQ32MH5 1076 aa19.39■□□□□ 0.69
CHKB-201ENST00000406938 HES3Q5TGS1 186 aa19.39■□□□□ 0.69
CHKB-201ENST00000406938 BLOC1S3Q6QNY0 202 aa19.39■□□□□ 0.69
CHKB-201ENST00000406938 MMP21Q8N119 569 aa19.39■□□□□ 0.69
CHKB-201ENST00000406938 GLB1L3Q8NCI6 653 aaPredicted RBP19.39■□□□□ 0.69
CHKB-201ENST00000406938 TESCQ96BS2 214 aa19.39■□□□□ 0.69
CHKB-201ENST00000406938 CMTM5Q96DZ9 223 aa19.39■□□□□ 0.69
CHKB-201ENST00000406938 NDC1Q9BTX1 674 aa19.39■□□□□ 0.69
CHKB-201ENST00000406938 TAGLN3Q9UI15 199 aa19.39■□□□□ 0.69
CHKB-201ENST00000406938 FBXW2Q9UKT8 454 aa19.39■□□□□ 0.69
CHKB-201ENST00000406938 EXO1Q9UQ84 846 aaKnown RBP19.39■□□□□ 0.69
CHKB-201ENST00000406938 ASB4Q9Y574 426 aa19.39■□□□□ 0.69
CHKB-201ENST00000406938 DMXL1Q9Y485 3027 aa19.39■□□□□ 0.69
CHKB-201ENST00000406938 ERICH4A6NGS2 130 aa19.38■□□□□ 0.69
CHKB-201ENST00000406938 TM4SF5O14894 197 aa19.38■□□□□ 0.69
CHKB-201ENST00000406938 ZNF749O43361 778 aa19.38■□□□□ 0.69
CHKB-201ENST00000406938 DNAJB6O75190 326 aa19.38■□□□□ 0.69
CHKB-201ENST00000406938 CSO75390 466 aaKnown RBP19.38■□□□□ 0.69
CHKB-201ENST00000406938 RDH16O75452 317 aa19.38■□□□□ 0.69
CHKB-201ENST00000406938 DKK1O94907 266 aa19.38■□□□□ 0.69
CHKB-201ENST00000406938 MT-CO3P00414 261 aa19.38■□□□□ 0.69
CHKB-201ENST00000406938 SNRPB2P08579 225 aaKnown RBP19.38■□□□□ 0.69
CHKB-201ENST00000406938 CDK4P11802 303 aa19.38■□□□□ 0.69
CHKB-201ENST00000406938 CAPN3P20807 821 aa19.38■□□□□ 0.69
CHKB-201ENST00000406938 SIM1P81133 766 aaPredicted RBP19.38■□□□□ 0.69
CHKB-201ENST00000406938 MC1RQ01726 317 aa19.38■□□□□ 0.69
CHKB-201ENST00000406938 C2orf80Q0P641 193 aa19.38■□□□□ 0.69
CHKB-201ENST00000406938 RUNX2Q13950 521 aa19.38■□□□□ 0.69
CHKB-201ENST00000406938 CYLC2Q14093 348 aaPredicted RBP19.38■□□□□ 0.69
CHKB-201ENST00000406938 UGT8Q16880 541 aa19.38■□□□□ 0.69
CHKB-201ENST00000406938 FAM174BQ3ZCQ3 159 aa19.38■□□□□ 0.69
CHKB-201ENST00000406938 TIGD2Q4W5G0 525 aa19.38■□□□□ 0.69
CHKB-201ENST00000406938 SPANXN4Q5MJ08 99 aa19.38■□□□□ 0.69
CHKB-201ENST00000406938 CCDC121Q6ZUS5 278 aa19.38■□□□□ 0.69
CHKB-201ENST00000406938 TTLL10Q6ZVT0 673 aa19.38■□□□□ 0.69
CHKB-201ENST00000406938 EFCAB3Q8N7B9 438 aa19.38■□□□□ 0.69
CHKB-201ENST00000406938 OR5T3Q8NGG3 340 aa19.38■□□□□ 0.69
CHKB-201ENST00000406938 RP9Q8TA86 221 aaKnown RBP19.38■□□□□ 0.69
CHKB-201ENST00000406938 CMKLR1Q99788 373 aa19.38■□□□□ 0.69
CHKB-201ENST00000406938 MAPKAP1Q9BPZ7 522 aa19.38■□□□□ 0.69
CHKB-201ENST00000406938 STRADBQ9C0K7 418 aa19.38■□□□□ 0.69
CHKB-201ENST00000406938 APMAPQ9HDC9 416 aa19.38■□□□□ 0.69
CHKB-201ENST00000406938 AKAP7Q9P0M2 348 aaPredicted RBP19.38■□□□□ 0.69
CHKB-201ENST00000406938 DHCR7Q9UBM7 475 aaKnown RBP19.38■□□□□ 0.69
CHKB-201ENST00000406938 WBP11Q9Y2W2 641 aaKnown RBP19.38■□□□□ 0.69
CHKB-201ENST00000406938 ATG4BQ9Y4P1 393 aa19.38■□□□□ 0.69
CHKB-201ENST00000406938 TIAF1O95411 115 aa19.37■□□□□ 0.69
CHKB-201ENST00000406938 NSA2O95478 260 aaKnown RBP19.37■□□□□ 0.69
CHKB-201ENST00000406938 T-ENOLP0DO92 83 aa19.37■□□□□ 0.69
CHKB-201ENST00000406938 CCL4P13236 92 aa19.37■□□□□ 0.69
CHKB-201ENST00000406938 COX7A2P14406 83 aa19.37■□□□□ 0.69
CHKB-201ENST00000406938 CPA2P48052 419 aa19.37■□□□□ 0.69
CHKB-201ENST00000406938 LIM2P55344 173 aa19.37■□□□□ 0.69
CHKB-201ENST00000406938 SKP1P63208 163 aa19.37■□□□□ 0.69
CHKB-201ENST00000406938 BNIP1Q12981 228 aa19.37■□□□□ 0.69
CHKB-201ENST00000406938 VPS26BQ4G0F5 336 aa19.37■□□□□ 0.69
CHKB-201ENST00000406938 NDUFAF5Q5TEU4 345 aa19.37■□□□□ 0.69
CHKB-201ENST00000406938 ANKRD26P1Q6NSI1 321 aa19.37■□□□□ 0.69
CHKB-201ENST00000406938 NIPAL1Q6NVV3 410 aa19.37■□□□□ 0.69
CHKB-201ENST00000406938 CYB5D1Q6P9G0 228 aa19.37■□□□□ 0.69
CHKB-201ENST00000406938 GPR180Q86V85 440 aa19.37■□□□□ 0.69
CHKB-201ENST00000406938 PPP1R3BQ86XI6 285 aa19.37■□□□□ 0.69
CHKB-201ENST00000406938 METTL27Q8N6F8 245 aaPredicted RBP19.37■□□□□ 0.69
CHKB-201ENST00000406938 OR7A2PQ8NGA2 310 aa19.37■□□□□ 0.69
CHKB-201ENST00000406938 STARD8Q92502 1023 aa19.37■□□□□ 0.69
CHKB-201ENST00000406938 VPS33AQ96AX1 596 aa19.37■□□□□ 0.69
CHKB-201ENST00000406938 SPDL1Q96EA4 605 aa19.37■□□□□ 0.69
CHKB-201ENST00000406938 SLC25A23Q9BV35 468 aa19.37■□□□□ 0.69
CHKB-201ENST00000406938 REEP4Q9H6H4 257 aa19.37■□□□□ 0.69
CHKB-201ENST00000406938 SLC52A3Q9NQ40 469 aa19.37■□□□□ 0.69
CHKB-201ENST00000406938 DAPP1Q9UN19 280 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms