RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 PDE7AQ13946 482 aa19.98■□□□□ 0.79
TPM1-208ENST00000404484 SNCBQ16143 134 aa19.98■□□□□ 0.79
TPM1-208ENST00000404484 LRIF1Q5T3J3 769 aa19.98■□□□□ 0.79
TPM1-208ENST00000404484 NANOGP8Q6NSW7 305 aa19.98■□□□□ 0.79
TPM1-208ENST00000404484 VN1R4Q7Z5H5 301 aa19.98■□□□□ 0.79
TPM1-208ENST00000404484 UBE3DQ7Z6J8 389 aa19.98■□□□□ 0.79
TPM1-208ENST00000404484 EID2Q8N6I1 236 aa19.98■□□□□ 0.79
TPM1-208ENST00000404484 OR2A5Q96R48 311 aa19.98■□□□□ 0.79
TPM1-208ENST00000404484 C17orf62Q9BQA9 187 aa19.98■□□□□ 0.79
TPM1-208ENST00000404484 SORBS1Q9BX66 1292 aaKnown RBP19.98■□□□□ 0.79
TPM1-208ENST00000404484 ROGDIQ9GZN7 287 aa19.98■□□□□ 0.79
TPM1-208ENST00000404484 RAB33BQ9H082 229 aa19.98■□□□□ 0.79
TPM1-208ENST00000404484 NANOGQ9H9S0 305 aa19.98■□□□□ 0.79
TPM1-208ENST00000404484 MIEF1Q9NQG6 463 aa19.98■□□□□ 0.79
TPM1-208ENST00000404484 SH3BP4Q9P0V3 963 aa19.98■□□□□ 0.79
TPM1-208ENST00000404484 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.98■□□□□ 0.79
TPM1-208ENST00000404484 BTNL2Q9UIR0 455 aa19.98■□□□□ 0.79
TPM1-208ENST00000404484 PRSS51A0A1B0GVH4 220 aa19.97■□□□□ 0.79
TPM1-208ENST00000404484 GABRR3A8MPY1 467 aa19.97■□□□□ 0.79
TPM1-208ENST00000404484 RTCAO00442 366 aaKnown RBP19.97■□□□□ 0.79
TPM1-208ENST00000404484 RFXANKO14593 260 aa19.97■□□□□ 0.79
TPM1-208ENST00000404484 IL3P08700 152 aa19.97■□□□□ 0.79
TPM1-208ENST00000404484 GPR3P46089 330 aa19.97■□□□□ 0.79
TPM1-208ENST00000404484 PLA2G16P53816 162 aa19.97■□□□□ 0.79
TPM1-208ENST00000404484 PHC1P78364 1004 aa19.97■□□□□ 0.79
TPM1-208ENST00000404484 BNIP2Q12982 314 aa19.97■□□□□ 0.79
TPM1-208ENST00000404484 FLOT2Q14254 428 aa19.97■□□□□ 0.79
TPM1-208ENST00000404484 TRIM25Q14258 630 aaKnown RBP19.97■□□□□ 0.79
TPM1-208ENST00000404484 MANEAQ5SRI9 462 aa19.97■□□□□ 0.79
TPM1-208ENST00000404484 ABHD17CQ6PCB6 329 aa19.97■□□□□ 0.79
TPM1-208ENST00000404484 GLRX5Q86SX6 157 aa19.97■□□□□ 0.79
TPM1-208ENST00000404484 ZCCHC7Q8N3Z6 543 aaKnown RBP19.97■□□□□ 0.79
TPM1-208ENST00000404484 TM4SF19Q96DZ7 209 aa19.97■□□□□ 0.79
TPM1-208ENST00000404484 ZNF764Q96H86 408 aaPredicted RBP19.97■□□□□ 0.79
TPM1-208ENST00000404484 PPM1MQ96MI6 270 aa19.97■□□□□ 0.79
TPM1-208ENST00000404484 ANKRD27Q96NW4 1050 aa19.97■□□□□ 0.79
TPM1-208ENST00000404484 GBP5Q96PP8 586 aa19.97■□□□□ 0.79
TPM1-208ENST00000404484 CD180Q99467 661 aa19.97■□□□□ 0.79
TPM1-208ENST00000404484 CDC6Q99741 560 aa19.97■□□□□ 0.79
TPM1-208ENST00000404484 MUC13Q9H3R2 512 aa19.97■□□□□ 0.79
TPM1-208ENST00000404484 DCLRE1BQ9H816 532 aa19.97■□□□□ 0.79
TPM1-208ENST00000404484 LHX9Q9NQ69 397 aa19.97■□□□□ 0.79
TPM1-208ENST00000404484 SERHLQ9NQF3 203 aa19.97■□□□□ 0.79
TPM1-208ENST00000404484 C1GALT1Q9NS00 363 aa19.97■□□□□ 0.79
TPM1-208ENST00000404484 EVA1BQ9NVM1 165 aa19.97■□□□□ 0.79
TPM1-208ENST00000404484 CMTM6Q9NX76 183 aa19.97■□□□□ 0.79
TPM1-208ENST00000404484 NLGN3Q9NZ94 848 aa19.97■□□□□ 0.79
TPM1-208ENST00000404484 SLAMF8Q9P0V8 285 aa19.97■□□□□ 0.79
TPM1-208ENST00000404484 A0A0A6YYD5 115 aa19.96■□□□□ 0.79
TPM1-208ENST00000404484 A0A0J9YVX5 310 aa19.96■□□□□ 0.79
TPM1-208ENST00000404484 PRORSD1PA6NEY8 169 aa19.96■□□□□ 0.79
TPM1-208ENST00000404484 TBX19O60806 448 aa19.96■□□□□ 0.79
TPM1-208ENST00000404484 CTSVO60911 334 aa19.96■□□□□ 0.79
TPM1-208ENST00000404484 ANP32DO95626 131 aa19.96■□□□□ 0.79
TPM1-208ENST00000404484 LAMP1P11279 417 aa19.96■□□□□ 0.79
TPM1-208ENST00000404484 PIM1P11309 404 aaPredicted RBP19.96■□□□□ 0.79
TPM1-208ENST00000404484 GLB1P16278 677 aa19.96■□□□□ 0.79
TPM1-208ENST00000404484 LSSP48449 732 aa19.96■□□□□ 0.79
TPM1-208ENST00000404484 PPM1FP49593 454 aaPredicted RBP19.96■□□□□ 0.79
TPM1-208ENST00000404484 IRGCQ6NXR0 463 aa19.96■□□□□ 0.79
TPM1-208ENST00000404484 ZNF438Q7Z4V0 828 aa19.96■□□□□ 0.79
TPM1-208ENST00000404484 RNF148Q8N7C7 305 aa19.96■□□□□ 0.79
TPM1-208ENST00000404484 CCDC115Q96NT0 180 aa19.96■□□□□ 0.79
TPM1-208ENST00000404484 FAIM2Q9BWQ8 316 aa19.96■□□□□ 0.79
TPM1-208ENST00000404484 NLNQ9BYT8 704 aa19.96■□□□□ 0.79
TPM1-208ENST00000404484 PAIP1Q9H074 479 aaKnown RBP19.96■□□□□ 0.79
TPM1-208ENST00000404484 COPS7BQ9H9Q2 264 aaPredicted RBP19.96■□□□□ 0.79
TPM1-208ENST00000404484 LRIT1Q9P2V4 623 aa19.96■□□□□ 0.79
TPM1-208ENST00000404484 EPHA6Q9UF33 1036 aa19.96■□□□□ 0.79
TPM1-208ENST00000404484 PACSIN3Q9UKS6 424 aa19.96■□□□□ 0.79
TPM1-208ENST00000404484 RNF215Q9Y6U7 377 aa19.96■□□□□ 0.79
TPM1-208ENST00000404484 MDC1Q14676 2089 aaKnown RBP19.96■□□□□ 0.79
TPM1-208ENST00000404484 RNASET2O00584 256 aaKnown RBP19.95■□□□□ 0.78
TPM1-208ENST00000404484 ZSCAN9O15535 394 aaPredicted RBP19.95■□□□□ 0.78
TPM1-208ENST00000404484 MAP3K7O43318 606 aa19.95■□□□□ 0.78
TPM1-208ENST00000404484 FKBP6O75344 327 aa19.95■□□□□ 0.78
TPM1-208ENST00000404484 BCAS2O75934 225 aaPredicted RBP19.95■□□□□ 0.78
TPM1-208ENST00000404484 SORBS2O94875 1100 aaKnown RBP19.95■□□□□ 0.78
TPM1-208ENST00000404484 KLHL18O94889 574 aa19.95■□□□□ 0.78
TPM1-208ENST00000404484 PVRP15151 417 aa19.95■□□□□ 0.78
TPM1-208ENST00000404484 DDCP20711 480 aa19.95■□□□□ 0.78
TPM1-208ENST00000404484 ZNF10P21506 573 aaPredicted RBP19.95■□□□□ 0.78
TPM1-208ENST00000404484 HIST1H1TP22492 207 aaPredicted RBP19.95■□□□□ 0.78
TPM1-208ENST00000404484 WNT3P56703 355 aa19.95■□□□□ 0.78
TPM1-208ENST00000404484 PLIN5Q00G26 463 aa19.95■□□□□ 0.78
TPM1-208ENST00000404484 SLC9A5Q14940 896 aa19.95■□□□□ 0.78
TPM1-208ENST00000404484 INAVAQ3KP66 663 aa19.95■□□□□ 0.78
TPM1-208ENST00000404484 ZC3H12BQ5HYM0 836 aaKnown RBP19.95■□□□□ 0.78
TPM1-208ENST00000404484 ZCCHC8Q6NZY4 707 aaKnown RBP19.95■□□□□ 0.78
TPM1-208ENST00000404484 SLCO6A1Q86UG4 719 aa19.95■□□□□ 0.78
TPM1-208ENST00000404484 C19orf47Q8N9M1 422 aaKnown RBP19.95■□□□□ 0.78
TPM1-208ENST00000404484 OR6C4Q8NGE1 309 aa19.95■□□□□ 0.78
TPM1-208ENST00000404484 ZDHHC12Q96GR4 267 aa19.95■□□□□ 0.78
TPM1-208ENST00000404484 TEFMQ96QE5 360 aaKnown RBP19.95■□□□□ 0.78
TPM1-208ENST00000404484 PANX1Q96RD7 426 aa19.95■□□□□ 0.78
TPM1-208ENST00000404484 AICDAQ9GZX7 198 aa19.95■□□□□ 0.78
TPM1-208ENST00000404484 KLHL31Q9H511 634 aa19.95■□□□□ 0.78
TPM1-208ENST00000404484 SCELO95171 688 aa19.95■□□□□ 0.78
TPM1-208ENST00000404484 GIMD1P0DJR0 217 aa19.95■□□□□ 0.78
TPM1-208ENST00000404484 DRD2P14416 443 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms