RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 FUCA2Q9BTY2 467 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 PANK2Q9BZ23 570 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 UPF3AQ9H1J1 476 aaKnown RBP4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 SLC52A3Q9NQ40 469 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 ZNF302Q9NR11 478 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 NRBP2Q9NSY0 501 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 MRGBPQ9NV56 204 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 ANO10Q9NW15 660 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 RMND1Q9NWS8 449 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 WRAP73Q9P2S5 460 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 ODF2LQ9ULJ1 636 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 CEP350Q5VT06 3117 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 COL1A2P08123 1366 aa4.48□□□□□ -1.69
HMGB3P19-201ENST00000403971 A0A1W2PN81 502 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 SYCE3A1L190 88 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 ARHGEF35A5YM69 484 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 ENO4A6NNW6 628 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 ATP6V0E1O15342 81 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 KLRC4O43908 158 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 GSRP00390 522 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 ERVK-10P10266 1014 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 PDGFRAP16234 1089 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 GAP43P17677 238 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 CHRNA7P36544 502 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 GP5P40197 560 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 ZNF131P52739 623 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 PRKCEQ02156 737 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 PNOCQ13519 176 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 SQLEQ14534 574 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 P2RY6Q15077 328 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 PKN2Q16513 984 aaKnown RBP4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 CAMK4Q16566 473 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 KRTAP24-1Q3LI83 254 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 LBHQ53QV2 105 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 CYP4A22Q5TCH4 519 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 SASS6Q6UVJ0 657 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 C1orf186Q6ZWK4 172 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 GALNTL5Q7Z4T8 443 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 GPBP1Q86WP2 473 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 NUDT13Q86X67 352 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 CCDC65Q8IXS2 484 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 MLKLQ8NB16 471 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 TRPV1Q8NER1 839 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 ATP8B4Q8TF62 1192 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 PHLDA1Q8WV24 401 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 DNASE2BQ8WZ79 361 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 FAM71F1Q96KD3 344 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 RMDN2Q96LZ7 410 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 GBP5Q96PP8 586 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 PLIN2Q99541 437 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 JPH2Q9BR39 696 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 DHX33Q9H6R0 707 aaKnown RBP4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 AZI2Q9H6S1 392 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 Q9H8V8 135 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 PFDN4Q9NQP4 134 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 ERAP1Q9NZ08 941 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 STUB1Q9UNE7 303 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 TRIM17Q9Y577 477 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 ANK1P16157 1881 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 HTTP42858 3142 aa4.47□□□□□ -1.69
HMGB3P19-201ENST00000403971 PDCD11Q14690 1871 aaKnown RBP4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 IGKV6-21A0A0C4DH24 114 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 ARHGEF37A1IGU5 675 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 PRR23D1E9PI22 279 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 HAS3O00219 553 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 MAGEB2O15479 319 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 TBCAO75347 108 aaKnown RBP4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 CABYRO75952 493 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 DDHD2O94830 711 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 RPN1P04843 607 aaKnown RBP4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 LGALS2P05162 132 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 PRR23D2P0DMB1 279 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 SAGP10523 405 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 CDH3P22223 829 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 NKX2-1P43699 371 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 GSDMDP57764 484 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 ASIC1P78348 528 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 SP4Q02446 784 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 GCNT1Q02742 428 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 GPR17Q13304 367 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 GIT2Q14161 759 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 STX1AQ16623 288 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 UGCGQ16739 394 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 SLC25A53Q5H9E4 307 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 ZNF658Q5TYW1 1059 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 SH2D5Q6ZV89 423 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 SLC16A9Q7RTY1 509 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 LGI2Q8N0V4 545 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 OR4K1Q8NGD4 311 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 KIFAP3Q92845 792 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 ZNF501Q96CX3 271 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 CEP170P1Q96L14 293 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 CCDC43Q96MW1 224 aaKnown RBP4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 BPIFA3Q9BQP9 254 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 KRTAP1-5Q9BYS1 174 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 PRRG4Q9BZD6 226 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 MIS12Q9H081 205 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 NAT10Q9H0A0 1025 aaKnown RBP4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 SHARPINQ9H0F6 387 aa4.46□□□□□ -1.7
HMGB3P19-201ENST00000403971 BLZF1Q9H2G9 400 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms