RNA–Protein interactions for RNA: ENST00000403663.6

TRIOBP-203, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIOBP, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-203ENST00000403663 ZDHHC21Q8IVQ6 265 aa22.55■■□□□ 1.2
TRIOBP-203ENST00000403663 C10orf111Q8N326 155 aa22.55■■□□□ 1.2
TRIOBP-203ENST00000403663 NKAPQ8N5F7 415 aaKnown RBP22.55■■□□□ 1.2
TRIOBP-203ENST00000403663 KCNJ9Q92806 393 aa22.55■■□□□ 1.2
TRIOBP-203ENST00000403663 TM9SF3Q9HD45 589 aa22.55■■□□□ 1.2
TRIOBP-203ENST00000403663 MBNL1Q9NR56 388 aaKnown RBP22.55■■□□□ 1.2
TRIOBP-203ENST00000403663 CD274Q9NZQ7 290 aa22.55■■□□□ 1.2
TRIOBP-203ENST00000403663 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP22.55■■□□□ 1.2
TRIOBP-203ENST00000403663 PCDHB1Q9Y5F3 818 aa22.55■■□□□ 1.2
TRIOBP-203ENST00000403663 PCDHGB6Q9Y5F9 930 aa22.55■■□□□ 1.2
TRIOBP-203ENST00000403663 A0A1W2PQU0 124 aa22.54■■□□□ 1.2
TRIOBP-203ENST00000403663 PDZK1P1A8MUH7 402 aa22.54■■□□□ 1.2
TRIOBP-203ENST00000403663 E5RI56 91 aa22.54■■□□□ 1.2
TRIOBP-203ENST00000403663 WBP4O75554 376 aaKnown RBP22.54■■□□□ 1.2
TRIOBP-203ENST00000403663 SLC25A14O95258 325 aaPredicted RBP22.54■■□□□ 1.2
TRIOBP-203ENST00000403663 ABRAXAS2Q15018 415 aa22.54■■□□□ 1.2
TRIOBP-203ENST00000403663 GPSM1Q86YR5 675 aa22.54■■□□□ 1.2
TRIOBP-203ENST00000403663 BEND7Q8N7W2 519 aaPredicted RBP22.54■■□□□ 1.2
TRIOBP-203ENST00000403663 TBC1D20Q96BZ9 403 aa22.54■■□□□ 1.2
TRIOBP-203ENST00000403663 NECAB3Q96P71 396 aaPredicted RBP22.54■■□□□ 1.2
TRIOBP-203ENST00000403663 ZBTB18Q99592 522 aa22.54■■□□□ 1.2
TRIOBP-203ENST00000403663 TBC1D17Q9HA65 648 aa22.54■■□□□ 1.2
TRIOBP-203ENST00000403663 TMA7Q9Y2S6 64 aaKnown RBP22.54■■□□□ 1.2
TRIOBP-203ENST00000403663 BDP1A6H8Y1 2624 aa22.54■■□□□ 1.2
TRIOBP-203ENST00000403663 FAM220BPB1ANY3 271 aa22.54■■□□□ 1.2
TRIOBP-203ENST00000403663 ZW10O43264 779 aa22.54■■□□□ 1.2
TRIOBP-203ENST00000403663 SEC22BO75396 215 aa22.54■■□□□ 1.2
TRIOBP-203ENST00000403663 VPS26AO75436 327 aa22.54■■□□□ 1.2
TRIOBP-203ENST00000403663 ACADMP11310 421 aa22.54■■□□□ 1.2
TRIOBP-203ENST00000403663 CTSKP43235 329 aa22.54■■□□□ 1.2
TRIOBP-203ENST00000403663 GPR1P46091 355 aa22.54■■□□□ 1.2
TRIOBP-203ENST00000403663 PROX2Q3B8N5 592 aa22.54■■□□□ 1.2
TRIOBP-203ENST00000403663 SPANXN4Q5MJ08 99 aa22.54■■□□□ 1.2
TRIOBP-203ENST00000403663 ZNF544Q6NX49 715 aa22.54■■□□□ 1.2
TRIOBP-203ENST00000403663 MACC1Q6ZN28 852 aa22.54■■□□□ 1.2
TRIOBP-203ENST00000403663 VPS35Q96QK1 796 aa22.54■■□□□ 1.2
TRIOBP-203ENST00000403663 HHIPQ96QV1 700 aa22.54■■□□□ 1.2
TRIOBP-203ENST00000403663 ABCG2Q9UNQ0 655 aa22.54■■□□□ 1.2
TRIOBP-203ENST00000403663 TBC1D3DA0A087WVF3 549 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 TBC1D3IA0A087WXS9 549 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 TBC1D3EA0A087X179 549 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 TBC1D3KA0A087X1G2 549 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 TBC1D3FA6NER0 549 aaPredicted RBP22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 TBC1D3LB9A6J9 549 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 RNGTTO60942 597 aaKnown RBP22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 PCCBP05166 539 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 TBC1D3HP0C7X1 549 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 HOXB6P17509 224 aaKnown RBP22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 HOXD11P31277 338 aaPredicted RBP22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 OR2B6P58173 313 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 DEFA1P59665 94 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 DEFA3P59666 94 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 RACK1P63244 317 aaKnown RBP22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 CHRNEQ04844 493 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 DPTQ07507 201 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 TBC1D3GQ6DHY5 549 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 TBC1D3CQ6IPX1 549 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 ZNF765Q7L2R6 523 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 SYT13Q7L8C5 426 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 CALHM3Q86XJ0 350 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 TBC1D3Q8IZP1 549 aaPredicted RBP22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 MYOCQ99972 504 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 REXO4Q9GZR2 422 aaKnown RBP22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 SLC6A13Q9NSD5 602 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 OR2AG2A6NM03 316 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 SNX4O95219 450 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 MED26O95402 600 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 APOA1P02647 267 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 PGRP06401 933 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 SLC2A4P14672 509 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 PRKCAP17252 672 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 GZMMP51124 257 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 CTSCP53634 463 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 RPL38P63173 70 aaKnown RBP22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 GTF2H3Q13889 308 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 PGBD3Q8N328 593 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 RASGEF1AQ8N9B8 481 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 APH1BQ8WW43 257 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 FCGR1BQ92637 280 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 FZD3Q9NPG1 666 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 EHD3Q9NZN3 535 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 SCML1Q9UN30 329 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 CCL27Q9Y4X3 112 aa22.53■■□□□ 1.2
TRIOBP-203ENST00000403663 TRBV5-3A0A0A0MS03 114 aa22.52■■□□□ 1.2
TRIOBP-203ENST00000403663 CHURC1-FNTBB4DL54 471 aa22.52■■□□□ 1.2
TRIOBP-203ENST00000403663 PCDHGA12O60330 932 aa22.52■■□□□ 1.2
TRIOBP-203ENST00000403663 ATP1B2P14415 290 aaPredicted RBP22.52■■□□□ 1.2
TRIOBP-203ENST00000403663 CDK10Q15131 360 aa22.52■■□□□ 1.2
TRIOBP-203ENST00000403663 KIAA1614Q5VZ46 1190 aa22.52■■□□□ 1.2
TRIOBP-203ENST00000403663 ATG9BQ674R7 924 aa22.52■■□□□ 1.2
TRIOBP-203ENST00000403663 UBQLNLQ8IYU4 475 aa22.52■■□□□ 1.2
TRIOBP-203ENST00000403663 OR4F6Q8NGB9 312 aa22.52■■□□□ 1.2
TRIOBP-203ENST00000403663 EEF1AKMT1Q8WVE0 214 aa22.52■■□□□ 1.2
TRIOBP-203ENST00000403663 DDX28Q9NUL7 540 aaKnown RBP22.52■■□□□ 1.2
TRIOBP-203ENST00000403663 C1orf109Q9NX04 203 aa22.52■■□□□ 1.2
TRIOBP-203ENST00000403663 CCDC59Q9P031 241 aaKnown RBP22.52■■□□□ 1.2
TRIOBP-203ENST00000403663 TRMT6Q9UJA5 497 aaKnown RBP22.52■■□□□ 1.2
TRIOBP-203ENST00000403663 FZD4Q9ULV1 537 aa22.52■■□□□ 1.2
TRIOBP-203ENST00000403663 MRPS17Q9Y2R5 130 aaKnown RBP22.52■■□□□ 1.2
TRIOBP-203ENST00000403663 GRK5P34947 590 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms