RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 EFSO43281 561 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 CTNSO60931 367 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 SOX30O94993 753 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 BMP10O95393 424 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 PDYNP01213 254 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 ZGLP1P0C6A0 271 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 PRPS2P11908 318 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 LIFP15018 202 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 NR1D1P20393 614 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 RPL14P50914 215 aaKnown RBP7.11□□□□□ -1.27
USP16-204ENST00000399976 CLDN6P56747 220 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 TXNL4AP83876 142 aaKnown RBP7.11□□□□□ -1.27
USP16-204ENST00000399976 CHAF1BQ13112 559 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 HSP90B2PQ58FF3 399 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 ARL13AQ5H913 290 aaPredicted RBP7.11□□□□□ -1.27
USP16-204ENST00000399976 H3F3CQ6NXT2 135 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 TTLL10Q6ZVT0 673 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 DND1Q8IYX4 353 aaKnown RBP7.11□□□□□ -1.27
USP16-204ENST00000399976 ACTRT2Q8TDY3 377 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 SELENOMQ8WWX9 145 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 ARL8AQ96BM9 186 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 FER1L6-AS2Q96M78 137 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 RNF32Q9H0A6 362 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 CHST8Q9H2A9 424 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 COPS7BQ9H9Q2 264 aaPredicted RBP7.11□□□□□ -1.27
USP16-204ENST00000399976 CIDEBQ9UHD4 219 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 NAALAD2Q9Y3Q0 740 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 ASB4Q9Y574 426 aa7.11□□□□□ -1.27
USP16-204ENST00000399976 DMXL1Q9Y485 3027 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 C1orf226A1L170 272 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 LRRC14BA6NHZ5 514 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 C1QTNF9BB2RNN3 333 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 SPAG7O75391 227 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 C1QTNF9P0C862 333 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 CREB1P16220 341 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 TLX1P31314 330 aaPredicted RBP7.1□□□□□ -1.27
USP16-204ENST00000399976 TIA1P31483 386 aaKnown RBP eCLIP7.1□□□□□ -1.274e-9■■■■■ 31.7
USP16-204ENST00000399976 BUD31P41223 144 aaPredicted RBP7.1□□□□□ -1.27
USP16-204ENST00000399976 FRKP42685 505 aaPredicted RBP7.1□□□□□ -1.27
USP16-204ENST00000399976 SLC1A6P48664 564 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 LIM2P55344 173 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 KIAA0040Q15053 153 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 EXT1Q16394 746 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 DEFB110Q30KQ9 67 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 OR52E8Q6IFG1 317 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 MSANTD1Q6ZTZ1 278 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 ACOT4Q8N9L9 421 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 OR51Q1Q8NH59 317 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 M1APQ8TC57 530 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 MR1Q95460 341 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 MIEF2Q96C03 454 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 ART5Q96L15 291 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 TUBB6Q9BUF5 446 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 FAIM2Q9BWQ8 316 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 ACPTQ9BZG2 426 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 MANSC1Q9H8J5 431 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 POLHQ9Y253 713 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 KLHL20Q9Y2M5 609 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 LAMA1P25391 3075 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 VPS13AQ96RL7 3174 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 PCSK5Q92824 1860 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 OR6C76A6NM76 312 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 CLDN4O14493 209 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 SOCS6O14544 535 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 PROM1O43490 865 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 UMODP07911 640 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 ATP4BP51164 291 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 RPS13P62277 151 aaKnown RBP7.1□□□□□ -1.27
USP16-204ENST00000399976 PDE7AQ13946 482 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 DPY19L1Q2PZI1 675 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 TTC19Q6DKK2 380 aaPredicted RBP7.1□□□□□ -1.27
USP16-204ENST00000399976 SPATA19Q7Z5L4 167 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 FAM20CQ8IXL6 584 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 GPALPP1Q8IXQ4 340 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 ENDOVQ8N8Q3 282 aaKnown RBP7.1□□□□□ -1.27
USP16-204ENST00000399976 KCT2Q8NC54 265 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 C17orf47Q8NEP4 570 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 STT3BQ8TCJ2 826 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 ZNF675Q8TD23 568 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 OIT3Q8WWZ8 545 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 CCDC28BQ9BUN5 200 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 UNKQ9C0B0 810 aaKnown RBP7.1□□□□□ -1.27
USP16-204ENST00000399976 SEMA4CQ9C0C4 833 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 C1orf109Q9NX04 203 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 DNAJC15Q9Y5T4 150 aa7.1□□□□□ -1.27
USP16-204ENST00000399976 ERVH48-1M5A8F1 160 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 LSM1O15116 133 aaKnown RBP7.09□□□□□ -1.27
USP16-204ENST00000399976 ERI3O43414 337 aaKnown RBP7.09□□□□□ -1.27
USP16-204ENST00000399976 CHST10O43529 356 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 NRP2O60462 931 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 MYO1DO94832 1006 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 TCN2P20062 427 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 TPP2P29144 1249 aaPredicted RBP7.09□□□□□ -1.27
USP16-204ENST00000399976 RAP1GDS1P52306 607 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 EMX2Q04743 252 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 TSTA3Q13630 321 aaPredicted RBP7.09□□□□□ -1.27
USP16-204ENST00000399976 CHI3L2Q15782 390 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 CPSF6Q16630 551 aaKnown RBP eCLIP7.09□□□□□ -1.27
USP16-204ENST00000399976 IGFL2Q6UWQ7 119 aa7.09□□□□□ -1.27
USP16-204ENST00000399976 KBTBD2Q8IY47 623 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms