RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 COL26A1Q96A83 441 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 RGMAQ96B86 450 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 APIPQ96GX9 242 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 C3orf30Q96M34 536 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 KCNC2Q96PR1 638 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 CSF3RQ99062 836 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 MESP1Q9BRJ9 268 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 TBCDQ9BTW9 1192 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 RBCK1Q9BYM8 510 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 DDX31Q9H8H2 851 aaKnown RBP11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 THAP1Q9NVV9 213 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 KCMF1Q9P0J7 381 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 GIMAP2Q9UG22 337 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 CDC14AQ9UNH5 594 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 MAP4K5Q9Y4K4 846 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 PCDHGA6Q9Y5G7 932 aa11.73□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ANKRD11Q6UB99 2663 aaPredicted RBP11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 A0A087WV48 116 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 TMEM8BA6NDV4 472 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 OR2W5A6NFC9 320 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SKAP2O75563 359 aaPredicted RBP11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 CRCPO75575 148 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 BMP10O95393 424 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ALBP02768 609 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 GBAP04062 536 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 LINC00032P0C843 101 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ITPKBP27987 946 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 PTPN4P29074 926 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SSR2P43308 183 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 RAP1GDS1P52306 607 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ARFIP1P53367 373 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 MTTPP55157 894 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 HNRNPH2P55795 449 aaKnown RBP11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 TLE3Q04726 772 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 IL10RAQ13651 578 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ERV3-1Q14264 604 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 KIAA0040Q15053 153 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 MLIPQ5VWP3 458 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ATG16L1Q676U5 607 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 RGS9BPQ6ZS82 235 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SHISA6Q6ZSJ9 500 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 MAVSQ7Z434 540 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 LAPTM4BQ86VI4 370 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 C1orf52Q8N6N3 182 aaKnown RBP11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 TMEM52Q8NDY8 209 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 OR51Q1Q8NH59 317 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 STT3BQ8TCJ2 826 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 PEX11GQ96HA9 241 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SERINC2Q96SA4 455 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 MAPKAP1Q9BPZ7 522 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 DPH1Q9BZG8 443 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 TGIF2Q9GZN2 237 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ILKAPQ9H0C8 392 aaPredicted RBP11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ACTL8Q9H568 366 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 LANCL2Q9NS86 450 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 TRPC4Q9UBN4 977 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 VPS29Q9UBQ0 182 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 FARSAQ9Y285 508 aaKnown RBP11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ASB4Q9Y574 426 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 TPRP12270 2363 aaKnown RBP11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SCN2AQ99250 2005 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ZZEF1O43149 2961 aa11.72□□□□□ -0.53
HLA-DQB1-203ENST00000399082 MAP1BP46821 2468 aaKnown RBP11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 CFAP47Q6ZTR5 3102 aa11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 C9J4A7 227 aa11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 FAM227AF5H4B4 570 aa11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 CYR61O00622 381 aa11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ZNF195O14628 629 aa11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 LSM1O15116 133 aaKnown RBP11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 RSL1D1O76021 490 aaKnown RBP11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SNUPNO95149 360 aaKnown RBP11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 FURINP09958 794 aa11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ZGLP1P0C6A0 271 aa11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 PRPH2P23942 346 aa11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 TSFMP43897 325 aaKnown RBP11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 XCR1P46094 333 aa11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 RPL14P50914 215 aaKnown RBP11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 LIM2P55344 173 aa11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 BTKQ06187 659 aa11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 KLC1Q07866 573 aa11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ATP1A1-AS1Q5TC04 95 aa11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 RIPOR1Q6ZS17 1223 aa11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 MED25Q71SY5 747 aa11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 PRSS58Q8IYP2 241 aa11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 ZCCHC7Q8N3Z6 543 aaKnown RBP11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SRFBP1Q8NEF9 429 aaKnown RBP11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 LRRC8CQ8TDW0 803 aa11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 UCN3Q969E3 161 aa11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 FAR2Q96K12 515 aa11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 FCRL1Q96LA6 429 aa11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 MAGEB18Q96M61 343 aa11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 C7orf26Q96N11 449 aa11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 CNTNAP3BQ96NU0 1288 aa11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 NPLQ9BXD5 320 aaPredicted RBP11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 CNTNAP3Q9BZ76 1288 aa11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 SOX17Q9H6I2 414 aaPredicted RBP11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 WDR54Q9H977 334 aa11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 COPS7BQ9H9Q2 264 aaPredicted RBP11.71□□□□□ -0.53
HLA-DQB1-203ENST00000399082 GPN2Q9H9Y4 310 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms