RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 FDXRP22570 491 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 TBX5Q99593 518 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 HOXD1Q9GZZ0 328 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 FKBP14Q9NWM8 211 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 OSER1Q9NX31 292 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 ZDHHC3Q9NYG2 299 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 DPP7Q9UHL4 492 aa14.06□□□□□ -0.16
RPRD1A-202ENST00000399022 CLDN24A6NM45 220 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 UPK3BL1B0FP48 263 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 UPK3BL2E5RIL1 263 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 PEPDP12955 493 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 GP2P55259 537 aaKnown RBP14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 LACC1Q8IV20 430 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 DNAJA4Q8WW22 397 aaPredicted RBP14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 SCAMP4Q969E2 229 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 SCRN2Q96FV2 425 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 SPATA5L1Q9BVQ7 753 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 DEC1Q9P2X7 70 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 FXYD6-FXYD2A0A087WZ82 144 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 CPSF4LA6NMK7 179 aaKnown RBP14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 FAM25EA8MYX2 175 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 WNT9AO14904 365 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 RPN2P04844 631 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 RGS6P49758 472 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 PRKCDQ05655 676 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 MTAPQ13126 283 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 PPIGQ13427 754 aaKnown RBP eCLIP14.05□□□□□ -0.162e-7■■□□□ 12.7
RPRD1A-202ENST00000399022 ARSIQ5FYB1 569 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 CLEC12AQ5QGZ9 265 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 KCTD11Q693B1 232 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 PAMR1Q6UXH9 720 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 SLITRK4Q8IW52 837 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 NT5C3BQ969T7 300 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 UHRF1Q96T88 793 aaPredicted RBP14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 FUZQ9BT04 418 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 RIOK2Q9BVS4 552 aaKnown RBP14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 FXYD6Q9H0Q3 95 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 CELP19835 753 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 RPL35P42766 123 aaKnown RBP14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 ERVPABLB-1P60509 514 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 UAP1L1Q3KQV9 507 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 ATAT1Q5SQI0 421 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 PXDC1Q5TGL8 231 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 PIANPQ8IYJ0 282 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 UBE2E3Q969T4 207 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 FYTTD1Q96QD9 318 aaKnown RBP14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 CD93Q9NPY3 652 aa14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 ZNF282Q9UDV7 671 aaPredicted RBP14.05□□□□□ -0.16
RPRD1A-202ENST00000399022 B8ZZF3 427 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 LDB2O43679 373 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 HLA-DPB1P04440 258 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 SLC35G4P0C7Q5 338 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 TGFBR1P36897 503 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 CXCR4P61073 352 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 KEAP1Q14145 624 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 TATDN3Q17R31 274 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 SLC5A8Q8N695 610 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 DCAF4L2Q8NA75 395 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 GEMIN6Q8WXD5 167 aaKnown RBP14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 OR8D1Q8WZ84 308 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 C12orf66Q96MD2 445 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 SLC32A1Q9H598 525 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 DCAF13Q9NV06 445 aaKnown RBP14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 MKL2Q9ULH7 1088 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 TBC1D24Q9ULP9 559 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 INSL5Q9Y5Q6 135 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 RETP07949 1114 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 FSHRP23945 695 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 IL32P24001 234 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 CARD16Q5EG05 197 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 ARMC6Q6NXE6 501 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 Q6ZVL8 140 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 GDPD3Q7L5L3 318 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 NFKBIDQ8NI38 313 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 PROKR1Q8TCW9 393 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 IGSF21Q96ID5 467 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 CCM2Q9BSQ5 444 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 BOCQ9BWV1 1114 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 TSSK6Q9BXA6 273 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 ELAC1Q9H777 363 aaKnown RBP14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 CERS4Q9HA82 394 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 GBAP04062 536 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 C8GP07360 202 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 TGFBR2P37173 567 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 PPP2R2BQ00005 443 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 EXOC3L2Q2M3D2 409 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 LINGO2Q7L985 606 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 C17orf64Q86WR6 236 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 GDPD1Q8N9F7 314 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 TREX1Q9NSU2 369 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 IRAK3Q9Y616 596 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 RGRP47804 291 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 CDK6Q00534 326 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 NFATC2Q13469 925 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 PTPRRQ15256 657 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 CATSPEREQ5SY80 951 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 BCL2L15Q5TBC7 163 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 Q6ZPB1 254 aaPredicted RBP14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 KLHDC9Q8NEP7 349 aa14.04□□□□□ -0.16
RPRD1A-202ENST00000399022 RFKQ969G6 155 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms