RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 SCN2BO60939 215 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 LAMP1P11279 417 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 POU3F3P20264 500 aaPredicted RBP15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 AOAHP28039 575 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 IDH2P48735 452 aaKnown RBP15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 RGS6P49758 472 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 CRYBA2P53672 197 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 CASP9P55211 416 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 OLR1P78380 273 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 IQCCQ4KMZ1 466 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 LYPLAL1Q5VWZ2 237 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 TPGS1Q6ZTW0 290 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 TRIM48Q8IWZ4 208 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 PGBD3Q8N328 593 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 LILRB1Q8NHL6 650 aaPredicted RBP15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 DNAJA4Q8WW22 397 aaPredicted RBP15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 C7orf34Q96L11 122 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 TTPALQ9BTX7 342 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 TPT1P8Q9HAU6 139 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 GPR83Q9NYM4 423 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 PSORS1C1Q9UIG5 152 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 OR51B4Q9Y5P0 310 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 A0A0B4J293 547 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 NPIPB15A6NHN6 443 aaPredicted RBP15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 M0R129 80 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 BNIP3LO60238 219 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 GALTP07902 379 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 HIST1H2AGP0C0S8 130 aaPredicted RBP15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 HIST1H2ADP20671 130 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 OR1D2P34982 312 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 NSG1P42857 185 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 KCNJ10P78508 379 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 B4GALNT1Q00973 533 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 SMARCB1Q12824 385 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 FOXD4Q12950 439 aaPredicted RBP15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 CHIT1Q13231 466 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 BOP1Q14137 746 aaKnown RBP15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 MFSD13AQ14CX5 517 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 GGTA1PQ4G0N0 100 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 OR52J3Q8NH60 311 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 CSGALNACT1Q8TDX6 532 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 BCL7CQ8WUZ0 217 aaPredicted RBP15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 GIMAP1Q8WWP7 306 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 GGHQ92820 318 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 RNF31Q96EP0 1072 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 HIST1H2AHQ96KK5 128 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 MTERF1Q99551 399 aaKnown RBP15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 FEVQ99581 238 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 HIST1H2AJQ99878 128 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 H2AFJQ9BTM1 129 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 FZD4Q9ULV1 537 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 HSPB11Q9Y547 144 aa15.33■□□□□ 0.04
CHMP1A-201ENST00000397901 H7C4K7 107 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 OPN1SWP03999 348 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 CDK1P06493 297 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 STSP08842 583 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 HSMCR30P0CW71 290 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 ICAM2P13598 275 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 HMGA1P17096 107 aaKnown RBP15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 PRPH2P23942 346 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 B2MP61769 119 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 TAB1Q15750 504 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 DEFB115Q30KQ5 88 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 TIMM50Q3ZCQ8 353 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 ATP13A5Q4VNC0 1218 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 LAMTOR1Q6IAA8 161 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 TMPRSS11AQ6ZMR5 421 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 MSANTD1Q6ZTZ1 278 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 FAM124AQ86V42 546 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 NPAS4Q8IUM7 802 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 ZNF557Q8N988 423 aaPredicted RBP15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 SPPL2AQ8TCT8 520 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 P2RY13Q9BPV8 354 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 KLF16Q9BXK1 252 aaPredicted RBP15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 SRRQ9GZT4 340 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 PLCXD1Q9NUJ7 323 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 TMEM39AQ9NV64 488 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 ING3Q9NXR8 418 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 COQ3Q9NZJ6 369 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 FAM8A1Q9UBU6 413 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 LRFN2Q9ULH4 789 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 RGS5O15539 181 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 SUV39H1O43463 412 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 GNRH1P01148 92 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 CPN2P22792 545 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 CRISP3P54108 245 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 SMAD3P84022 425 aaKnown RBP15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 SRSF11Q05519 484 aaKnown RBP15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 ELAVL2Q12926 359 aaKnown RBP15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 QPRTQ15274 297 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 TAF12Q16514 161 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 GPR33Q49SQ1 333 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 ZMAT1Q5H9K5 638 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 RNF130Q86XS8 419 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 SYNPOQ8N3V7 929 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 DNAJC22Q8N4W6 341 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 L3MBTL4Q8NA19 623 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 SLAIN1Q8ND83 568 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 MAGEB10Q96LZ2 347 aaPredicted RBP15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 COPS8Q99627 209 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms