RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 USP53Q70EK8 1073 aa18.5■□□□□ 0.55
PDLIM2-205ENST00000397761 GPR180Q86V85 440 aa18.5■□□□□ 0.55
PDLIM2-205ENST00000397761 OR8K5Q8NH50 307 aa18.5■□□□□ 0.55
PDLIM2-205ENST00000397761 DNAJB8Q8NHS0 232 aa18.5■□□□□ 0.55
PDLIM2-205ENST00000397761 CDC26Q8NHZ8 85 aa18.5■□□□□ 0.55
PDLIM2-205ENST00000397761 KLHL6Q8WZ60 621 aa18.5■□□□□ 0.55
PDLIM2-205ENST00000397761 PHOX2BQ99453 314 aa18.5■□□□□ 0.55
PDLIM2-205ENST00000397761 PRPF18Q99633 342 aaKnown RBP18.5■□□□□ 0.55
PDLIM2-205ENST00000397761 CCDC3Q9BQI4 270 aa18.5■□□□□ 0.55
PDLIM2-205ENST00000397761 THTPAQ9BU02 230 aa18.5■□□□□ 0.55
PDLIM2-205ENST00000397761 PDE7BQ9NP56 450 aa18.5■□□□□ 0.55
PDLIM2-205ENST00000397761 TMEM9Q9P0T7 183 aa18.5■□□□□ 0.55
PDLIM2-205ENST00000397761 PLCL2Q9UPR0 1127 aa18.5■□□□□ 0.55
PDLIM2-205ENST00000397761 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.5■□□□□ 0.55
PDLIM2-205ENST00000397761 TRBV5-3A0A0A0MS03 114 aa18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 A0A0G2JN53 185 aa18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 A0A1W2PQM1 296 aa18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 FAM58BPP0C7Q3 252 aa18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 HOXB9P17482 250 aaPredicted RBP18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 DDCP20711 480 aa18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 ATXN3P54252 364 aaPredicted RBP18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 MTTPP55157 894 aa18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 VSX2P58304 361 aaPredicted RBP18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 HSD11B2P80365 405 aa18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 MC1RQ01726 317 aa18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 NFYCQ13952 458 aa18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 SLC9A5Q14940 896 aa18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 PGS1Q32NB8 556 aa18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 INAVAQ3KP66 663 aa18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 LRIF1Q5T3J3 769 aa18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 OR4F3Q6IEY1 312 aa18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 PRMT9Q6P2P2 845 aa18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 TMEM71Q6P5X7 295 aa18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 BNC2Q6ZN30 1099 aaPredicted RBP18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 ABHD13Q7L211 337 aa18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 DGLUCYQ7Z3D6 616 aa18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 DHDDSQ86SQ9 333 aa18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 ULK2Q8IYT8 1036 aa18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 D2HGDHQ8N465 521 aa18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 DPYSL5Q9BPU6 564 aa18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 NUDT22Q9BRQ3 303 aa18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 DUSP26Q9BV47 211 aa18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 NLNQ9BYT8 704 aa18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 BHLHE41Q9C0J9 482 aaPredicted RBP18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 TAS2R7Q9NYW3 318 aa18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 ABCD2Q9UBJ2 740 aa18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 NEUROG3Q9Y4Z2 214 aa18.49■□□□□ 0.55
PDLIM2-205ENST00000397761 CASC3O15234 703 aaKnown RBP18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 FLRT2O43155 660 aa18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 CPNE6O95741 557 aa18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 ANKRD34CP0C6C1 535 aa18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 DRD2P14416 443 aa18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 ALOX12P18054 663 aa18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 SLC6A2P23975 617 aa18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 CERS1P27544 350 aa18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 PTPN6P29350 595 aa18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 MLLT3P42568 568 aaPredicted RBP18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 PPM1FP49593 454 aaPredicted RBP18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 SLAMF1Q13291 335 aa18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 HEPACAMQ14CZ8 416 aa18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 DEFB110Q30KQ9 67 aa18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 ZNF385BQ569K4 471 aa18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 PIGGQ5H8A4 983 aa18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 WASHC2DQ5SRD0 308 aa18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 SCUBE1Q8IWY4 988 aa18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 KIAA2013Q8IYS2 634 aa18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 ITCHQ96J02 903 aa18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 SERINC2Q96SA4 455 aa18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 LRRN3Q9H3W5 708 aa18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 ZNF768Q9H5H4 540 aaKnown RBP18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 RMND5AQ9H871 391 aa18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 SPAG4Q9NPE6 437 aa18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 ATAD3AQ9NVI7 634 aa18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 LYARQ9NX58 379 aaKnown RBP18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 TEX10Q9NXF1 929 aaPredicted RBP18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 EHD3Q9NZN3 535 aa18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 SLAMF8Q9P0V8 285 aa18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 TMEM181Q9P2C4 612 aa18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 BTNL2Q9UIR0 455 aa18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 MRPS2Q9Y399 296 aaKnown RBP18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 SEC16AO15027 2179 aa18.48■□□□□ 0.55
PDLIM2-205ENST00000397761 FAM186AA6NE01 2351 aa18.47■□□□□ 0.55
PDLIM2-205ENST00000397761 FER1L5A0AVI2 2057 aa18.47■□□□□ 0.55
PDLIM2-205ENST00000397761 A0A096LPI6 279 aa18.47■□□□□ 0.55
PDLIM2-205ENST00000397761 FITM1A5D6W6 292 aa18.47■□□□□ 0.55
PDLIM2-205ENST00000397761 H3BMH7 237 aa18.47■□□□□ 0.55
PDLIM2-205ENST00000397761 GUCY1B2O75343 617 aa18.47■□□□□ 0.55
PDLIM2-205ENST00000397761 ERN1O75460 977 aaKnown RBP18.47■□□□□ 0.55
PDLIM2-205ENST00000397761 RASSF9O75901 435 aa18.47■□□□□ 0.55
PDLIM2-205ENST00000397761 KCNH1O95259 989 aa18.47■□□□□ 0.55
PDLIM2-205ENST00000397761 TRPC1P48995 793 aa18.47■□□□□ 0.55
PDLIM2-205ENST00000397761 EMP3P54852 163 aa18.47■□□□□ 0.55
PDLIM2-205ENST00000397761 CCL7P80098 99 aa18.47■□□□□ 0.55
PDLIM2-205ENST00000397761 LRRC74AQ0VAA2 488 aa18.47■□□□□ 0.55
PDLIM2-205ENST00000397761 SLC14A1Q13336 389 aa18.47■□□□□ 0.55
PDLIM2-205ENST00000397761 ANKRD26P1Q6NSI1 321 aa18.47■□□□□ 0.55
PDLIM2-205ENST00000397761 ZNF574Q6ZN55 896 aaPredicted RBP18.47■□□□□ 0.55
PDLIM2-205ENST00000397761 TMPRSS9Q7Z410 1059 aa18.47■□□□□ 0.55
PDLIM2-205ENST00000397761 OR4D9Q8NGE8 314 aa18.47■□□□□ 0.55
PDLIM2-205ENST00000397761 IFI44Q8TCB0 444 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms