RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 OR52E6Q96RD3 313 aa26.09■■□□□ 1.77
CPNE1-203ENST00000397442 NLNQ9BYT8 704 aa26.09■■□□□ 1.77
CPNE1-203ENST00000397442 TMEM9BQ9NQ34 198 aa26.09■■□□□ 1.77
CPNE1-203ENST00000397442 TEX10Q9NXF1 929 aaPredicted RBP26.09■■□□□ 1.77
CPNE1-203ENST00000397442 ASB4Q9Y574 426 aa26.09■■□□□ 1.77
CPNE1-203ENST00000397442 SLC22A7Q9Y694 548 aa26.09■■□□□ 1.77
CPNE1-203ENST00000397442 SPTBP11277 2137 aa26.09■■□□□ 1.77
CPNE1-203ENST00000397442 H3BMH7 237 aa26.09■■□□□ 1.77
CPNE1-203ENST00000397442 NTN3O00634 580 aaPredicted RBP26.09■■□□□ 1.77
CPNE1-203ENST00000397442 ANKRD34CP0C6C1 535 aa26.09■■□□□ 1.77
CPNE1-203ENST00000397442 FAM58BPP0C7Q3 252 aa26.09■■□□□ 1.77
CPNE1-203ENST00000397442 LAMP1P11279 417 aa26.09■■□□□ 1.77
CPNE1-203ENST00000397442 ALOX12P18054 663 aa26.09■■□□□ 1.77
CPNE1-203ENST00000397442 TGM1P22735 817 aa26.09■■□□□ 1.77
CPNE1-203ENST00000397442 HPCAL1P37235 193 aa26.09■■□□□ 1.77
CPNE1-203ENST00000397442 MTTPP55157 894 aa26.09■■□□□ 1.77
CPNE1-203ENST00000397442 WNT3P56703 355 aa26.09■■□□□ 1.77
CPNE1-203ENST00000397442 SRSF11Q05519 484 aaKnown RBP26.09■■□□□ 1.77
CPNE1-203ENST00000397442 COL9A2Q14055 689 aaPredicted RBP26.09■■□□□ 1.77
CPNE1-203ENST00000397442 SLC9A5Q14940 896 aa26.09■■□□□ 1.77
CPNE1-203ENST00000397442 C8orf82Q6P1X6 216 aaPredicted RBP26.09■■□□□ 1.77
CPNE1-203ENST00000397442 PRSS41Q7RTY9 318 aa26.09■■□□□ 1.77
CPNE1-203ENST00000397442 ARHGAP22Q7Z5H3 698 aa26.09■■□□□ 1.77
CPNE1-203ENST00000397442 PCYOX1LQ8NBM8 494 aa26.09■■□□□ 1.77
CPNE1-203ENST00000397442 ENAMQ9NRM1 1142 aa26.09■■□□□ 1.77
CPNE1-203ENST00000397442 IGHV5-10-1A0A0J9YXX1 117 aa26.08■■□□□ 1.77
CPNE1-203ENST00000397442 FXYD1O00168 92 aa26.08■■□□□ 1.77
CPNE1-203ENST00000397442 TXNDC9O14530 226 aa26.08■■□□□ 1.77
CPNE1-203ENST00000397442 SCN2BO60939 215 aa26.08■■□□□ 1.77
CPNE1-203ENST00000397442 LRP3O75074 770 aa26.08■■□□□ 1.77
CPNE1-203ENST00000397442 LMNAP02545 664 aaKnown RBP26.08■■□□□ 1.77
CPNE1-203ENST00000397442 KIR3DL1P43629 444 aa26.08■■□□□ 1.77
CPNE1-203ENST00000397442 PRSS53Q2L4Q9 553 aa26.08■■□□□ 1.77
CPNE1-203ENST00000397442 DNAL1Q4LDG9 190 aa26.08■■□□□ 1.77
CPNE1-203ENST00000397442 ZNF385BQ569K4 471 aa26.08■■□□□ 1.77
CPNE1-203ENST00000397442 OR4F3Q6IEY1 312 aa26.08■■□□□ 1.77
CPNE1-203ENST00000397442 PDSS2Q86YH6 399 aa26.08■■□□□ 1.77
CPNE1-203ENST00000397442 DEFB107AQ8IZN7 70 aa26.08■■□□□ 1.77
CPNE1-203ENST00000397442 GTF2H4Q92759 462 aa26.08■■□□□ 1.77
CPNE1-203ENST00000397442 ROPN1LQ96C74 230 aa26.08■■□□□ 1.77
CPNE1-203ENST00000397442 DPYSL5Q9BPU6 564 aa26.08■■□□□ 1.77
CPNE1-203ENST00000397442 SLAMF8Q9P0V8 285 aa26.08■■□□□ 1.77
CPNE1-203ENST00000397442 NCDNQ9UBB6 729 aa26.08■■□□□ 1.77
CPNE1-203ENST00000397442 FTSJ1Q9UET6 329 aa26.08■■□□□ 1.77
CPNE1-203ENST00000397442 MAP3K7O43318 606 aa26.07■■□□□ 1.76
CPNE1-203ENST00000397442 MED26O95402 600 aa26.07■■□□□ 1.76
CPNE1-203ENST00000397442 GP1BAP07359 652 aa26.07■■□□□ 1.76
CPNE1-203ENST00000397442 MSL3P1P0C860 447 aa26.07■■□□□ 1.76
CPNE1-203ENST00000397442 FOLR1P15328 257 aa26.07■■□□□ 1.76
CPNE1-203ENST00000397442 ARL4DP49703 201 aa26.07■■□□□ 1.76
CPNE1-203ENST00000397442 CLPPQ16740 277 aaPredicted RBP26.07■■□□□ 1.76
CPNE1-203ENST00000397442 NAXDQ8IW45 347 aa26.07■■□□□ 1.76
CPNE1-203ENST00000397442 PGAM4Q8N0Y7 254 aa26.07■■□□□ 1.76
CPNE1-203ENST00000397442 MTERF3Q96E29 417 aa26.07■■□□□ 1.76
CPNE1-203ENST00000397442 ROGDIQ9GZN7 287 aa26.07■■□□□ 1.76
CPNE1-203ENST00000397442 SYNDIG1Q9H7V2 258 aa26.07■■□□□ 1.76
CPNE1-203ENST00000397442 COPS7BQ9H9Q2 264 aaPredicted RBP26.07■■□□□ 1.76
CPNE1-203ENST00000397442 WDR41Q9HAD4 459 aa26.07■■□□□ 1.76
CPNE1-203ENST00000397442 SERHLQ9NQF3 203 aa26.07■■□□□ 1.76
CPNE1-203ENST00000397442 PCDHGA7Q9Y5G6 932 aa26.07■■□□□ 1.76
CPNE1-203ENST00000397442 CROCCQ5TZA2 2017 aa26.07■■□□□ 1.76
CPNE1-203ENST00000397442 CBFA2T3O75081 653 aa26.06■■□□□ 1.76
CPNE1-203ENST00000397442 DDCP20711 480 aa26.06■■□□□ 1.76
CPNE1-203ENST00000397442 GPR19Q15760 415 aa26.06■■□□□ 1.76
CPNE1-203ENST00000397442 CPTPQ5TA50 214 aa26.06■■□□□ 1.76
CPNE1-203ENST00000397442 C16orf89Q6UX73 402 aa26.06■■□□□ 1.76
CPNE1-203ENST00000397442 GPR180Q86V85 440 aa26.06■■□□□ 1.76
CPNE1-203ENST00000397442 C10orf90Q96M02 699 aa26.06■■□□□ 1.76
CPNE1-203ENST00000397442 SERINC2Q96SA4 455 aa26.06■■□□□ 1.76
CPNE1-203ENST00000397442 SPRTNQ9H040 489 aaPredicted RBP26.06■■□□□ 1.76
CPNE1-203ENST00000397442 ATG4BQ9Y4P1 393 aa26.06■■□□□ 1.76
CPNE1-203ENST00000397442 MUC6Q6W4X9 2439 aa26.06■■□□□ 1.76
CPNE1-203ENST00000397442 FITM1A5D6W6 292 aa26.06■■□□□ 1.76
CPNE1-203ENST00000397442 GALR3O60755 368 aaPredicted RBP26.06■■□□□ 1.76
CPNE1-203ENST00000397442 DNAJB6O75190 326 aa26.06■■□□□ 1.76
CPNE1-203ENST00000397442 IL1RNP18510 177 aa26.06■■□□□ 1.76
CPNE1-203ENST00000397442 MAPKAPK3Q16644 382 aa26.06■■□□□ 1.76
CPNE1-203ENST00000397442 TCTE1Q5JU00 501 aa26.06■■□□□ 1.76
CPNE1-203ENST00000397442 DLEU7Q6UYE1 221 aa26.06■■□□□ 1.76
CPNE1-203ENST00000397442 MSANTD1Q6ZTZ1 278 aa26.06■■□□□ 1.76
CPNE1-203ENST00000397442 R3HCC1LQ7Z5L2 792 aaKnown RBP26.06■■□□□ 1.76
CPNE1-203ENST00000397442 GFM1Q96RP9 751 aaKnown RBP26.06■■□□□ 1.76
CPNE1-203ENST00000397442 MAPKAP1Q9BPZ7 522 aa26.06■■□□□ 1.76
CPNE1-203ENST00000397442 GPATCH1Q9BRR8 931 aaKnown RBP26.06■■□□□ 1.76
CPNE1-203ENST00000397442 SLC39A3Q9BRY0 314 aa26.06■■□□□ 1.76
CPNE1-203ENST00000397442 DUSP26Q9BV47 211 aa26.06■■□□□ 1.76
CPNE1-203ENST00000397442 IL1RL2Q9HB29 575 aa26.06■■□□□ 1.76
CPNE1-203ENST00000397442 NDE1Q9NXR1 346 aa26.06■■□□□ 1.76
CPNE1-203ENST00000397442 A0A1W2PR48 441 aa26.05■■□□□ 1.76
CPNE1-203ENST00000397442 NQO1P15559 274 aaKnown RBP26.05■■□□□ 1.76
CPNE1-203ENST00000397442 RPL3P39023 403 aaKnown RBP26.05■■□□□ 1.76
CPNE1-203ENST00000397442 RUNX2Q13950 521 aa26.05■■□□□ 1.76
CPNE1-203ENST00000397442 NFYCQ13952 458 aa26.05■■□□□ 1.76
CPNE1-203ENST00000397442 HEPACAMQ14CZ8 416 aa26.05■■□□□ 1.76
CPNE1-203ENST00000397442 MPEG1Q2M385 716 aa26.05■■□□□ 1.76
CPNE1-203ENST00000397442 TRMT5Q32P41 509 aaKnown RBP26.05■■□□□ 1.76
CPNE1-203ENST00000397442 NDUFAF5Q5TEU4 345 aa26.05■■□□□ 1.76
CPNE1-203ENST00000397442 SLITRK4Q8IW52 837 aa26.05■■□□□ 1.76
CPNE1-203ENST00000397442 UCN3Q969E3 161 aa26.05■■□□□ 1.76
CPNE1-203ENST00000397442 PPCDCQ96CD2 204 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms