RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 CIB2O75838 187 aa12.07□□□□□ -0.48
TRIM39-204ENST00000396548 EPN2O95208 641 aa12.07□□□□□ -0.48
TRIM39-204ENST00000396548 FAM58BPP0C7Q3 252 aa12.07□□□□□ -0.48
TRIM39-204ENST00000396548 PCBP4P57723 403 aaKnown RBP12.07□□□□□ -0.48
TRIM39-204ENST00000396548 ZNF551Q7Z340 670 aaPredicted RBP12.07□□□□□ -0.48
TRIM39-204ENST00000396548 CALHM3Q86XJ0 350 aa12.07□□□□□ -0.48
TRIM39-204ENST00000396548 CARFQ8N187 725 aa12.07□□□□□ -0.48
TRIM39-204ENST00000396548 C10orf111Q8N326 155 aa12.07□□□□□ -0.48
TRIM39-204ENST00000396548 FAM47BQ8NA70 645 aa12.07□□□□□ -0.48
TRIM39-204ENST00000396548 OR8K5Q8NH50 307 aa12.07□□□□□ -0.48
TRIM39-204ENST00000396548 TCTN2Q96GX1 697 aa12.07□□□□□ -0.48
TRIM39-204ENST00000396548 CENPKQ9BS16 269 aa12.07□□□□□ -0.48
TRIM39-204ENST00000396548 KCMF1Q9P0J7 381 aa12.07□□□□□ -0.48
TRIM39-204ENST00000396548 CES1P1Q9UKY3 287 aa12.07□□□□□ -0.48
TRIM39-204ENST00000396548 SLC6A14Q9UN76 642 aa12.07□□□□□ -0.48
TRIM39-204ENST00000396548 MRPS2Q9Y399 296 aaKnown RBP12.07□□□□□ -0.48
TRIM39-204ENST00000396548 SPEGQ15772 3267 aa12.07□□□□□ -0.48
TRIM39-204ENST00000396548 C15orf38-AP3S2A0A0A6YYH1 394 aa12.07□□□□□ -0.48
TRIM39-204ENST00000396548 IGHV5-51A0A0C4DH38 117 aa12.07□□□□□ -0.48
TRIM39-204ENST00000396548 A0A0G2JN53 185 aa12.07□□□□□ -0.48
TRIM39-204ENST00000396548 ARHGAP33O14559 1287 aa12.07□□□□□ -0.48
TRIM39-204ENST00000396548 CASC3O15234 703 aaKnown RBP12.07□□□□□ -0.48
TRIM39-204ENST00000396548 ZCCHC18P0CG32 403 aa12.07□□□□□ -0.48
TRIM39-204ENST00000396548 CSF2RBP32927 897 aa12.07□□□□□ -0.48
TRIM39-204ENST00000396548 SLAMF1Q13291 335 aa12.07□□□□□ -0.48
TRIM39-204ENST00000396548 TRIM40Q6P9F5 258 aa12.07□□□□□ -0.48
TRIM39-204ENST00000396548 FAM92BQ6ZTR7 304 aa12.07□□□□□ -0.48
TRIM39-204ENST00000396548 ARPINQ7Z6K5 226 aa12.07□□□□□ -0.48
TRIM39-204ENST00000396548 CAMKVQ8NCB2 501 aa12.07□□□□□ -0.48
TRIM39-204ENST00000396548 SRFBP1Q8NEF9 429 aaKnown RBP12.07□□□□□ -0.48
TRIM39-204ENST00000396548 CIDECQ96AQ7 238 aaPredicted RBP12.07□□□□□ -0.48
TRIM39-204ENST00000396548 CCDC124Q96CT7 223 aaKnown RBP12.07□□□□□ -0.48
TRIM39-204ENST00000396548 ZNF583Q96ND8 569 aa12.07□□□□□ -0.48
TRIM39-204ENST00000396548 CD180Q99467 661 aa12.07□□□□□ -0.48
TRIM39-204ENST00000396548 PCDHAC1Q9H158 963 aa12.07□□□□□ -0.48
TRIM39-204ENST00000396548 NKX1-2Q9UD57 310 aaPredicted RBP12.07□□□□□ -0.48
TRIM39-204ENST00000396548 PADI4Q9UM07 663 aa12.07□□□□□ -0.48
TRIM39-204ENST00000396548 COL27A1Q8IZC6 1860 aaPredicted RBP12.07□□□□□ -0.48
TRIM39-204ENST00000396548 KNL1Q8NG31 2342 aa12.07□□□□□ -0.48
TRIM39-204ENST00000396548 ZDBF2Q9HCK1 2354 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 A0A1W2PR48 441 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 TLCD2A6NGC4 264 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 PROM1O43490 865 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 SLC35G6P0C7Q6 338 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 CERS1P27544 350 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 SSR2P43308 183 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 GSK3BP49841 420 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 PLIN5Q00G26 463 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 RGS1Q08116 209 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 LRRC74AQ0VAA2 488 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 SLC14A1Q13336 389 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 PRTGQ2VWP7 1150 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 PLA2G2CQ5R387 149 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 ANXA8L1Q5VT79 327 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 IRGCQ6NXR0 463 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 SPRED1Q7Z699 444 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 CDC26Q8NHZ8 85 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 LOXL4Q96JB6 756 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 PRPF18Q99633 342 aaKnown RBP12.06□□□□□ -0.48
TRIM39-204ENST00000396548 SLAMF7Q9NQ25 335 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 USP22Q9UPT9 525 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 ZSCAN9O15535 394 aaPredicted RBP12.06□□□□□ -0.48
TRIM39-204ENST00000396548 SIGLEC6O43699 453 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 PCDHGA12O60330 932 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 DNAJB6O75190 326 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 DRD2P14416 443 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 CDH3P22223 829 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 MTPNP58546 118 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 RAB8AP61006 207 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 GPLD1P80108 840 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 LIPEQ05469 1076 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 WDR74Q6RFH5 385 aaPredicted RBP12.06□□□□□ -0.48
TRIM39-204ENST00000396548 PDSS2Q86YH6 399 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 PPCDCQ96CD2 204 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 CHST8Q9H2A9 424 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 ALG2Q9H553 416 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 KAT8Q9H7Z6 458 aaKnown RBP12.06□□□□□ -0.48
TRIM39-204ENST00000396548 ATG4BQ9Y4P1 393 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 COL5A1P20908 1838 aaPredicted RBP12.06□□□□□ -0.48
TRIM39-204ENST00000396548 RFXANKO14593 260 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 PSMG1O95456 288 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 CFIP05156 583 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 SLC9A5Q14940 896 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 HEPACAMQ14CZ8 416 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 DBX2Q6ZNG2 339 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 TICAM1Q8IUC6 712 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 OR2I1PQ8NGU4 316 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 RASSF4Q9H2L5 321 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 ATAD3AQ9NVI7 634 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 EHD3Q9NZN3 535 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 TMEM9Q9P0T7 183 aa12.06□□□□□ -0.48
TRIM39-204ENST00000396548 NCOR1O75376 2440 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 ARHGAP10A1A4S6 786 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 GALR2O43603 387 aaPredicted RBP12.05□□□□□ -0.48
TRIM39-204ENST00000396548 HTR1EP28566 365 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 BTN3A2P78410 334 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 CEBPEQ15744 281 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 TRIM61Q5EBN2 209 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 NDUFAF5Q5TEU4 345 aa12.05□□□□□ -0.48
TRIM39-204ENST00000396548 MCATQ8IVS2 390 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms