RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 AGPAT4Q9NRZ5 378 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 GFOD1Q9NXC2 390 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 U3KQ87 197 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 SZT2Q5T011 3432 aa8.12□□□□□ -1.11
NDE1-202ENST00000396355 PROM1O43490 865 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 EFCAB14O75071 495 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 GABARAPO95166 117 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 C1QBP02746 253 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 ALPLP05186 524 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 ARSBP15848 533 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 TSHRP16473 764 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 RPL17P18621 184 aaKnown RBP8.11□□□□□ -1.11
NDE1-202ENST00000396355 MAGEA6P43360 314 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 CXCR3P49682 368 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 XKP51811 444 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 OR4D2P58180 307 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 MGAT3Q09327 533 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 RBM39Q14498 530 aaKnown RBP8.11□□□□□ -1.11
NDE1-202ENST00000396355 BAK1Q16611 211 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 MAPKAPK3Q16644 382 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 FAM187BQ17R55 369 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 AP5B1Q2VPB7 878 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 LIPKQ5VXJ0 399 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 SLC25A25Q6KCM7 469 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 POMZP3Q6PJE2 187 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 ZDHHC21Q8IVQ6 265 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 PTGR2Q8N8N7 351 aaPredicted RBP8.11□□□□□ -1.11
NDE1-202ENST00000396355 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.11□□□□□ -1.11
NDE1-202ENST00000396355 AP3S1Q92572 193 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 ACOX2Q99424 681 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 SLC30A3Q99726 388 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 TTPALQ9BTX7 342 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 C11orf84Q9BUA3 381 aaPredicted RBP8.11□□□□□ -1.11
NDE1-202ENST00000396355 CCDC32Q9BV29 185 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 ZNF471Q9BX82 626 aaPredicted RBP8.11□□□□□ -1.11
NDE1-202ENST00000396355 PRMT7Q9NVM4 692 aaPredicted RBP8.11□□□□□ -1.11
NDE1-202ENST00000396355 MAGEL2Q9UJ55 1249 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 ZNF223Q9UK11 482 aaPredicted RBP8.11□□□□□ -1.11
NDE1-202ENST00000396355 WASF3Q9UPY6 502 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 NAALAD2Q9Y3Q0 740 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 PCDHB14Q9Y5E9 798 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 SPAG17Q6Q759 2223 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 UBE2QL1A1L167 161 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 FAM86C2PA6NEL3 165 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 STK25O00506 426 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 EEF1E1O43324 174 aaKnown RBP8.11□□□□□ -1.11
NDE1-202ENST00000396355 HBP1O60381 514 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 SLC22A3O75751 556 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 ZNF865P0CJ78 1059 aaPredicted RBP8.11□□□□□ -1.11
NDE1-202ENST00000396355 CYP2F1P24903 491 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 MAPK1P28482 360 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 RPL9P32969 192 aaKnown RBP8.11□□□□□ -1.11
NDE1-202ENST00000396355 LIPAP38571 399 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 RRAS2P62070 204 aaPredicted RBP8.11□□□□□ -1.11
NDE1-202ENST00000396355 SLC10A7Q0GE19 358 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 PRKG2Q13237 762 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 RBMS2Q15434 407 aaKnown RBP8.11□□□□□ -1.11
NDE1-202ENST00000396355 ZNF792Q3KQV3 632 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 ARHGAP15Q53QZ3 475 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 PIK3R6Q5UE93 754 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 C22orf42Q6IC83 251 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 FAM198BQ6UWH4 519 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 RASGRP3Q8IV61 690 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 PYROXD2Q8N2H3 581 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 ARL6IP6Q8N6S5 226 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 DYNC2LI1Q8TCX1 351 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 SLC35F5Q8WV83 523 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 HMGB4Q8WW32 186 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 SLCO4A1Q96BD0 722 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 RPRD1AQ96P16 312 aaPredicted RBP8.11□□□□□ -1.11
NDE1-202ENST00000396355 PKMYT1Q99640 499 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 MGLLQ99685 303 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.11□□□□□ -1.11
NDE1-202ENST00000396355 SPNS1Q9H2V7 528 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 OR51B5Q9H339 312 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 TM9SF3Q9HD45 589 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 TMPRSS4Q9NRS4 437 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 SPIN1Q9Y657 262 aaPredicted RBP8.11□□□□□ -1.11
NDE1-202ENST00000396355 BCLAF3A2AJT9 711 aaKnown RBP8.11□□□□□ -1.11
NDE1-202ENST00000396355 PIP5K1BO14986 540 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 CAPN5O15484 640 aaPredicted RBP8.11□□□□□ -1.11
NDE1-202ENST00000396355 SOX15O60248 233 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 SNAI1O95863 264 aaPredicted RBP8.11□□□□□ -1.11
NDE1-202ENST00000396355 IL1BP01584 269 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 LGALS2P05162 132 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 RPS17P08708 135 aaKnown RBP8.11□□□□□ -1.11
NDE1-202ENST00000396355 EFNA1P20827 205 aaPredicted RBP8.11□□□□□ -1.11
NDE1-202ENST00000396355 PTBP1P26599 531 aaKnown RBP eCLIP8.11□□□□□ -1.112e-6■■■■■ 28.5
NDE1-202ENST00000396355 STAT5AP42229 794 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 SP140Q13342 867 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 ODF4Q2M2E3 257 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 SOWAHAQ2M3V2 549 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 KANK2Q63ZY3 851 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 OVOS1Q6IE37 1185 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 KIAA1841Q6NSI8 718 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 ARHGAP11AQ6P4F7 1023 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 ZNF621Q6ZSS3 439 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 NAA40Q86UY6 237 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 SCN4BQ8IWT1 228 aa8.11□□□□□ -1.11
NDE1-202ENST00000396355 CARNMT1Q8N4J0 409 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms