RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 TP53INP1Q96A56 240 aa13.81□□□□□ -0.2
SREBF1-205ENST00000395757 IRF2BPLQ9H1B7 796 aa13.81□□□□□ -0.2
SREBF1-205ENST00000395757 REEP4Q9H6H4 257 aa13.81□□□□□ -0.2
SREBF1-205ENST00000395757 FAM120CQ9NX05 1096 aaKnown RBP13.81□□□□□ -0.2
SREBF1-205ENST00000395757 A0A0C4DFX4 3053 aa13.81□□□□□ -0.2
SREBF1-205ENST00000395757 TIMP1P01033 207 aa13.81□□□□□ -0.2
SREBF1-205ENST00000395757 CXCL10P02778 98 aa13.81□□□□□ -0.2
SREBF1-205ENST00000395757 C1GALT1C1LP0DN25 315 aa13.81□□□□□ -0.2
SREBF1-205ENST00000395757 LASP1Q14847 261 aaKnown RBP13.81□□□□□ -0.2
SREBF1-205ENST00000395757 RBM48Q5RL73 367 aaKnown RBP13.81□□□□□ -0.2
SREBF1-205ENST00000395757 C9orf64Q5T6V5 341 aa13.81□□□□□ -0.2
SREBF1-205ENST00000395757 KIAA1614Q5VZ46 1190 aa13.81□□□□□ -0.2
SREBF1-205ENST00000395757 LIPJQ5W064 366 aa13.81□□□□□ -0.2
SREBF1-205ENST00000395757 QRSL1Q9H0R6 528 aaKnown RBP13.81□□□□□ -0.2
SREBF1-205ENST00000395757 TM9SF3Q9HD45 589 aa13.81□□□□□ -0.2
SREBF1-205ENST00000395757 TVP23BQ9NYZ1 205 aa13.81□□□□□ -0.2
SREBF1-205ENST00000395757 TMED5Q9Y3A6 229 aa13.81□□□□□ -0.2
SREBF1-205ENST00000395757 CLPXO76031 633 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 C9P02748 559 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 CD9P21926 228 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 GRK3P35626 688 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 KRT20P35900 424 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 CLK3P49761 638 aaKnown RBP13.8□□□□□ -0.2
SREBF1-205ENST00000395757 PPIGQ13427 754 aaKnown RBP eCLIP13.8□□□□□ -0.21e-7■■■□□ 17.3
SREBF1-205ENST00000395757 ZNF234Q14588 700 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 DGLUCYQ7Z3D6 616 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 FAM129BQ96TA1 746 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 SLC6A16Q9GZN6 736 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 IL1RAPQ9NPH3 570 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 PAK1IP1Q9NWT1 392 aaPredicted RBP13.8□□□□□ -0.2
SREBF1-205ENST00000395757 PCDHGB3Q9Y5G1 929 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 LYVE1Q9Y5Y7 322 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 IFNW1P05000 195 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 GTF2E2P29084 291 aaKnown RBP13.8□□□□□ -0.2
SREBF1-205ENST00000395757 PNLIPRP1P54315 467 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 PPP2R2BQ00005 443 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 CDKN3Q16667 212 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 TIGD6Q17RP2 521 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 FAM83HQ6ZRV2 1179 aaPredicted RBP13.8□□□□□ -0.2
SREBF1-205ENST00000395757 CCDC103Q8IW40 242 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 OR4N5Q8IXE1 308 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 CCDC116Q8IYX3 515 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 C16orf78Q8WTQ4 265 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 ISG20Q96AZ6 181 aaKnown RBP13.8□□□□□ -0.2
SREBF1-205ENST00000395757 LGR4Q9BXB1 951 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 HMG20AQ9NP66 347 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 AHSPQ9NZD4 102 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 DPP7Q9UHL4 492 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 ERVK-11Q9UQG0 969 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 ANGPT4Q9Y264 503 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 SLC35F4A4IF30 521 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 OTOL1A6NHN0 477 aaPredicted RBP13.8□□□□□ -0.2
SREBF1-205ENST00000395757 HEPACAM2A8MVW5 462 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 ERI3O43414 337 aaKnown RBP13.8□□□□□ -0.2
SREBF1-205ENST00000395757 C1orf105O95561 183 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 ADRB3P13945 408 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 MVKQ03426 396 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 TARDBPQ13148 414 aaKnown RBP eCLIP13.8□□□□□ -0.2
SREBF1-205ENST00000395757 CLCA4Q14CN2 919 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 ZDHHC20Q5W0Z9 365 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 ERICH5Q6P6B1 374 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 KIAA1324Q6UXG2 1013 aaKnown RBP13.8□□□□□ -0.2
SREBF1-205ENST00000395757 RBM45Q8IUH3 476 aaKnown RBP13.8□□□□□ -0.2
SREBF1-205ENST00000395757 KCT2Q8NC54 265 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 TBC1D15Q8TC07 691 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 PPP1R16AQ96I34 528 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 NIPSNAP1Q9BPW8 284 aa13.8□□□□□ -0.2
SREBF1-205ENST00000395757 ZBTB20Q9HC78 741 aaPredicted RBP13.8□□□□□ -0.2
SREBF1-205ENST00000395757 LATS1O95835 1130 aa13.79□□□□□ -0.2
SREBF1-205ENST00000395757 RETP07949 1114 aa13.79□□□□□ -0.2
SREBF1-205ENST00000395757 OR12D1P0DN82 309 aa13.79□□□□□ -0.2
SREBF1-205ENST00000395757 TAP2Q03519 686 aa13.79□□□□□ -0.2
SREBF1-205ENST00000395757 MPP7Q5T2T1 576 aa13.79□□□□□ -0.2
SREBF1-205ENST00000395757 CASP12Q6UXS9 341 aa13.79□□□□□ -0.2
SREBF1-205ENST00000395757 SVOPQ8N4V2 548 aa13.79□□□□□ -0.2
SREBF1-205ENST00000395757 SLC9A6Q92581 669 aa13.79□□□□□ -0.2
SREBF1-205ENST00000395757 UCN3Q969E3 161 aa13.79□□□□□ -0.2
SREBF1-205ENST00000395757 INIPQ9NRY2 104 aa13.79□□□□□ -0.2
SREBF1-205ENST00000395757 SLC23A2Q9UGH3 650 aa13.79□□□□□ -0.2
SREBF1-205ENST00000395757 C1QTNF3-AMACRE9PGA6 284 aa13.79□□□□□ -0.2
SREBF1-205ENST00000395757 IDSP22304 550 aa13.79□□□□□ -0.2
SREBF1-205ENST00000395757 DSTNP60981 165 aa13.79□□□□□ -0.2
SREBF1-205ENST00000395757 ISL1P61371 349 aa13.79□□□□□ -0.2
SREBF1-205ENST00000395757 AQP6Q13520 282 aa13.79□□□□□ -0.2
SREBF1-205ENST00000395757 ZNF542PQ5EBM4 170 aa13.79□□□□□ -0.2
SREBF1-205ENST00000395757 SHFQ7M4L6 423 aa13.79□□□□□ -0.2
SREBF1-205ENST00000395757 FRMD1Q8N878 549 aa13.79□□□□□ -0.2
SREBF1-205ENST00000395757 HPS1Q92902 700 aa13.79□□□□□ -0.2
SREBF1-205ENST00000395757 Q96MT0 163 aa13.79□□□□□ -0.2
SREBF1-205ENST00000395757 FCRL4Q96PJ5 515 aa13.79□□□□□ -0.2
SREBF1-205ENST00000395757 AIF1LQ9BQI0 150 aa13.79□□□□□ -0.2
SREBF1-205ENST00000395757 DCSTAMPQ9H295 470 aa13.79□□□□□ -0.2
SREBF1-205ENST00000395757 MS4A12Q9NXJ0 267 aa13.79□□□□□ -0.2
SREBF1-205ENST00000395757 ZNF282Q9UDV7 671 aaPredicted RBP13.79□□□□□ -0.2
SREBF1-205ENST00000395757 DNAH14Q0VDD8 3507 aa13.79□□□□□ -0.2
SREBF1-205ENST00000395757 CLDN25C9JDP6 229 aa13.79□□□□□ -0.2
SREBF1-205ENST00000395757 M0R3H8 397 aa13.79□□□□□ -0.2
SREBF1-205ENST00000395757 TFECO14948 347 aaPredicted RBP13.79□□□□□ -0.2
SREBF1-205ENST00000395757 MPC1LP0DKB6 136 aa13.79□□□□□ -0.2
SREBF1-205ENST00000395757 NPPBP16860 134 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms