RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 PRDM9Q9NQV7 894 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 ZNF358Q9NW07 568 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 WWOXQ9NZC7 414 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 GPRC5BQ9NZH0 403 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 CD274Q9NZQ7 290 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 ABI3Q9P2A4 366 aa8.28□□□□□ -1.08
ATG4A-205ENST00000394892 C19orf25Q9UFG5 118 aaPredicted RBP8.28□□□□□ -1.08
ATG4A-205ENST00000394892 UTP11Q9Y3A2 253 aaKnown RBP8.28□□□□□ -1.08
ATG4A-205ENST00000394892 CACNA1DQ01668 2161 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 ASPDHA6ND91 283 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 SAGE2PA6NJ88 616 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 WASHC1A8K0Z3 465 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 CCNT2O60583 730 aaKnown RBP8.27□□□□□ -1.09
ATG4A-205ENST00000394892 ZNF354AO60765 605 aaPredicted RBP8.27□□□□□ -1.09
ATG4A-205ENST00000394892 ZG16O60844 167 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 KERAO60938 352 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 SH3BGRLO75368 114 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 TPP2P29144 1249 aaPredicted RBP8.27□□□□□ -1.09
ATG4A-205ENST00000394892 SLC12A2P55011 1212 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 LIM2P55344 173 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 RAB38P57729 211 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 CAV1Q03135 178 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 ACTN3Q08043 901 aaPredicted RBP8.27□□□□□ -1.09
ATG4A-205ENST00000394892 CHIT1Q13231 466 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 CDSNQ15517 529 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 TBCCQ15814 346 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 PDK4Q16654 411 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 XKR6Q5GH73 641 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 MROH9Q5TGP6 573 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 RPS19BP1Q86WX3 136 aaKnown RBP8.27□□□□□ -1.09
ATG4A-205ENST00000394892 LAS2Q8IYD9 372 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 CYP4X1Q8N118 509 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 SNX31Q8N9S9 440 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 FAM47BQ8NA70 645 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 OR2L5Q8NG80 312 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 ANP32BQ92688 251 aaKnown RBP8.27□□□□□ -1.09
ATG4A-205ENST00000394892 CDKL2Q92772 493 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 RELTQ969Z4 430 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 C16orf45Q96MC5 204 aaPredicted RBP8.27□□□□□ -1.09
ATG4A-205ENST00000394892 MAPKAP1Q9BPZ7 522 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 MS4A8Q9BY19 250 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 FUT8Q9BYC5 575 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 TSPAN10Q9H1Z9 355 aaPredicted RBP8.27□□□□□ -1.09
ATG4A-205ENST00000394892 TRIM45Q9H8W5 580 aaPredicted RBP8.27□□□□□ -1.09
ATG4A-205ENST00000394892 KLHL1Q9NR64 748 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 SNX15Q9NRS6 342 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 SUCOQ9UBS9 1254 aaKnown RBP8.27□□□□□ -1.09
ATG4A-205ENST00000394892 METRNQ9UJH8 293 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 RNF112Q9ULX5 631 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 PPIEQ9UNP9 301 aaKnown RBP8.27□□□□□ -1.09
ATG4A-205ENST00000394892 SCN3AQ9NY46 2000 aa8.27□□□□□ -1.09
ATG4A-205ENST00000394892 ITPR2Q14571 2701 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 CROCCQ5TZA2 2017 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 CELSR2Q9HCU4 2923 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 A0A1B0GTL3 188 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 PABPN1LA6NDY0 278 aaKnown RBP8.26□□□□□ -1.09
ATG4A-205ENST00000394892 KLK8O60259 260 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 H2AFYO75367 372 aaKnown RBP8.26□□□□□ -1.09
ATG4A-205ENST00000394892 SCELO95171 688 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 UNC5CO95185 931 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 RASAL1O95294 804 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 ETHE1O95571 254 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 LTA4HP09960 611 aaKnown RBP8.26□□□□□ -1.09
ATG4A-205ENST00000394892 SBK3P0C264 359 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 POU3F2P20265 443 aaPredicted RBP8.26□□□□□ -1.09
ATG4A-205ENST00000394892 JAK1P23458 1154 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 ATP5A1P25705 553 aaKnown RBP8.26□□□□□ -1.09
ATG4A-205ENST00000394892 CRABP2P29373 138 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 STX2P32856 288 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 TRHRP34981 398 aaPredicted RBP8.26□□□□□ -1.09
ATG4A-205ENST00000394892 MAGEA12P43365 314 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 STXBP1P61764 594 aaKnown RBP8.26□□□□□ -1.09
ATG4A-205ENST00000394892 IRF8Q02556 426 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 SLMAPQ14BN4 828 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 INAQ16352 499 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 MEP1AQ16819 746 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 DGAT2L6Q6ZPD8 337 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 NCCRP1Q6ZVX7 275 aaPredicted RBP8.26□□□□□ -1.09
ATG4A-205ENST00000394892 GALNTL5Q7Z4T8 443 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 MDGA2Q7Z553 956 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.26□□□□□ -1.09
ATG4A-205ENST00000394892 CLNKQ7Z7G1 428 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 FJX1Q86VR8 437 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 RELL1Q8IUW5 271 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 LGI4Q8N135 537 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 TCAIMQ8N3R3 496 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 MMGT1Q8N4V1 131 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 TBC1D19Q8N5T2 526 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 OR7G3Q8NG95 312 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 STAG3L4Q8TBR4 150 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 THAP3Q8WTV1 239 aaPredicted RBP8.26□□□□□ -1.09
ATG4A-205ENST00000394892 PTPMT1Q8WUK0 201 aaPredicted RBP8.26□□□□□ -1.09
ATG4A-205ENST00000394892 SREK1Q8WXA9 508 aaKnown RBP8.26□□□□□ -1.09
ATG4A-205ENST00000394892 CCT6BQ92526 530 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 UCN3Q969E3 161 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 ISL2Q96A47 359 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 ANKRD9Q96BM1 317 aaPredicted RBP8.26□□□□□ -1.09
ATG4A-205ENST00000394892 PTCD3Q96EY7 689 aaKnown RBP8.26□□□□□ -1.09
ATG4A-205ENST00000394892 FRMD6Q96NE9 622 aa8.26□□□□□ -1.09
ATG4A-205ENST00000394892 NPLQ9BXD5 320 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms