RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 KLRG1Q96E93 195 aa12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 ZDHHC12Q96GR4 267 aa12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 XYLT2Q9H1B5 865 aa12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 POLR3FQ9H1D9 316 aaPredicted RBP12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 ANKRA2Q9H9E1 313 aa12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 ZNF226Q9NYT6 803 aa12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 NLGN3Q9NZ94 848 aa12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 OR6C2Q9NZP2 312 aa12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 AFF4Q9UHB7 1163 aaKnown RBP12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 RPS6KA6Q9UK32 745 aa12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 MIA3Q5JRA6 1907 aa12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 ERI2A8K979 691 aaKnown RBP12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 GPR171O14626 319 aa12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 RASGRP1O95267 797 aa12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 PRF1P14222 555 aa12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 CXCL2P19875 107 aa12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 ATP5A1P25705 553 aaKnown RBP12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 LCN1P31025 176 aa12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 AKR1C2P52895 323 aa12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 AKR1C1Q04828 323 aa12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 SF3A2Q15428 464 aaKnown RBP12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 MFSD14BQ5SR56 506 aa12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 BICRALQ6AI39 1079 aa12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 B3GLCTQ6Y288 498 aa12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 RELL2Q8NC24 303 aaPredicted RBP12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 SPATA22Q8NHS9 363 aa12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 SLC13A3Q8WWT9 602 aa12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 CDK15Q96Q40 435 aa12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 SAP130Q9H0E3 1048 aa12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 C8orf33Q9H7E9 229 aaPredicted RBP12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 GLOD4Q9HC38 313 aa12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 SH3BP4Q9P0V3 963 aa12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 POMT2Q9UKY4 750 aa12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 DUSP12Q9UNI6 340 aa12.04□□□□□ -0.48
SLC28A1-203ENST00000394573 BRCA1P38398 1863 aaKnown RBP12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 OR6C68A6NDL8 312 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 MPTX1A8MV57 137 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 WRBO00258 174 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 PRRG1O14668 218 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 SCAMP2O15127 329 aaKnown RBP12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 MDM4O15151 490 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 B3GALT4O96024 378 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 DHFRP00374 187 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 HOXC13P31276 330 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 CTNNB1P35222 781 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 ARL4AP40617 200 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 TCP10Q12799 353 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 PWP1Q13610 501 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 NKX1-1Q15270 411 aaPredicted RBP12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 TSC22D1Q15714 1073 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 DPYSL2Q16555 572 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 PRAMEF18Q5VWM3 479 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 ZCCHC12Q6PEW1 402 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 SSX9Q7RTT3 188 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 ISCA2Q86U28 154 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 OR4F6Q8NGB9 312 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 HRASLS5Q96KN8 279 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 RIT2Q99578 217 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 RAD9AQ99638 391 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 PDCD10Q9BUL8 212 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 TAPBPLQ9BX59 468 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 PPP1R3EQ9H7J1 279 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 SLC25A37Q9NYZ2 338 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 GPN3Q9UHW5 284 aaPredicted RBP12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 KCNK7Q9Y2U2 307 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 G3V3Q6 166 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 RECKO95980 971 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 NUDT7P0C024 238 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 HIST1H2AGP0C0S8 130 aaPredicted RBP12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 HIST1H2ADP20671 130 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 DNAJA1P31689 397 aaKnown RBP12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 MMP12P39900 470 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 TGFB2P61812 414 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 DEFA6Q01524 100 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 SLC3A1Q07837 685 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 TAF1AQ15573 450 aaPredicted RBP12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 HECTD3Q5T447 861 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 HIST2H2AA3Q6FI13 130 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 C19orf48Q6RUI8 117 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 NUDT18Q6ZVK8 323 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 SHFQ7M4L6 423 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 PODNQ7Z5L7 613 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 ZDHHC17Q8IUH5 632 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 OR52J3Q8NH60 311 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 TRMT10AQ8TBZ6 339 aaKnown RBP12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 DCAF4Q8WV16 495 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 SNX33Q8WV41 574 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 HIST1H2AHQ96KK5 128 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 HIST1H2AJQ99878 128 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 ABCG5Q9H222 651 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 UFSP2Q9NUQ7 469 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 HCN2Q9UL51 889 aa12.03□□□□□ -0.48
SLC28A1-203ENST00000394573 VEGFDO43915 354 aa12.02□□□□□ -0.48
SLC28A1-203ENST00000394573 IFNA4P05014 189 aa12.02□□□□□ -0.48
SLC28A1-203ENST00000394573 GABRB1P18505 474 aa12.02□□□□□ -0.48
SLC28A1-203ENST00000394573 FPR1P21462 350 aa12.02□□□□□ -0.48
SLC28A1-203ENST00000394573 RFC3P40938 356 aa12.02□□□□□ -0.48
SLC28A1-203ENST00000394573 CDKN2DP55273 166 aa12.02□□□□□ -0.48
SLC28A1-203ENST00000394573 FAM189BP81408 668 aa12.02□□□□□ -0.48
SLC28A1-203ENST00000394573 RAB33AQ14088 237 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms