RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 RPS17P08708 135 aaKnown RBP8.05□□□□□ -1.12
APLF-202ENST00000394342 SBK3P0C264 359 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 CASRP41180 1078 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 CCNG1P51959 295 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 ARFIP1P53367 373 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 PLA2G16P53816 162 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 MTTPP55157 894 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 RAB38P57729 211 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 BTN3A2P78410 334 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 Q0VFX4 171 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 RAPSNQ13702 412 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 RCN2Q14257 317 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 ABRAXAS2Q15018 415 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 C10orf62Q5T681 223 aaPredicted RBP8.05□□□□□ -1.12
APLF-202ENST00000394342 AGAP7PQ5VUJ5 663 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 ADNP2Q6IQ32 1131 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 JMJD6Q6NYC1 403 aaPredicted RBP8.05□□□□□ -1.12
APLF-202ENST00000394342 IGFL2Q6UWQ7 119 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 LANCL3Q6ZV70 420 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 CHSY3Q70JA7 882 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 ANKRD37Q7Z713 158 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 SLC22A9Q8IVM8 553 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 RIBC1Q8N443 379 aaPredicted RBP8.05□□□□□ -1.12
APLF-202ENST00000394342 HUS1BQ8NHY5 278 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 ZNF483Q8TF39 744 aaPredicted RBP8.05□□□□□ -1.12
APLF-202ENST00000394342 AENQ8WTP8 325 aaKnown RBP8.05□□□□□ -1.12
APLF-202ENST00000394342 TM9SF4Q92544 642 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 CAVIN3Q969G5 261 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 ATP6V1E2Q96A05 226 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 THOC3Q96J01 351 aaKnown RBP8.05□□□□□ -1.12
APLF-202ENST00000394342 IMMP1LQ96LU5 166 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 MAGEB10Q96LZ2 347 aaPredicted RBP8.05□□□□□ -1.12
APLF-202ENST00000394342 AGAP4Q96P64 663 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 F2RL3Q96RI0 385 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 SERINC2Q96SA4 455 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 MESP1Q9BRJ9 268 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 CENPKQ9BS16 269 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 TBCDQ9BTW9 1192 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 NTMT1Q9BV86 223 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 RBCK1Q9BYM8 510 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 NOL11Q9H8H0 719 aaKnown RBP8.05□□□□□ -1.12
APLF-202ENST00000394342 COPS7BQ9H9Q2 264 aaPredicted RBP8.05□□□□□ -1.12
APLF-202ENST00000394342 DMRT3Q9NQL9 472 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 PSD3Q9NYI0 1048 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 TMEM216Q9P0N5 145 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 DCDC2Q9UHG0 476 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 PPT2Q9UMR5 302 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 MMACHCQ9Y4U1 282 aa8.05□□□□□ -1.12
APLF-202ENST00000394342 USP9XQ93008 2570 aaPredicted RBP8.05□□□□□ -1.12
APLF-202ENST00000394342 SPTAN1Q13813 2472 aaKnown RBP8.04□□□□□ -1.12
APLF-202ENST00000394342 A0A0G2JN53 185 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 BLACEA4D250 179 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 SYNDIG1LA6NDD5 238 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 POM121CA8CG34 1229 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 GOLGA8RI6L899 631 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 FOXE1O00358 373 aaPredicted RBP8.04□□□□□ -1.12
APLF-202ENST00000394342 PRMT3O60678 531 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 DNAJB6O75190 326 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 GLRA3O75311 464 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 CDC123O75794 336 aaPredicted RBP8.04□□□□□ -1.12
APLF-202ENST00000394342 SCELO95171 688 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 OTCP00480 354 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 NUDT17P0C025 328 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 PRR35P0CG20 571 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 KRT15P19012 456 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 ATP5F1P24539 256 aaPredicted RBP8.04□□□□□ -1.12
APLF-202ENST00000394342 PTX3P26022 381 aaPredicted RBP8.04□□□□□ -1.12
APLF-202ENST00000394342 CERS1P27544 350 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 ARL1P40616 181 aaPredicted RBP8.04□□□□□ -1.12
APLF-202ENST00000394342 TSFMP43897 325 aaKnown RBP8.04□□□□□ -1.12
APLF-202ENST00000394342 SLCO1A2P46721 670 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 LIM2P55344 173 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 HERVK_113P63132 956 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 ACTN3Q08043 901 aaPredicted RBP8.04□□□□□ -1.12
APLF-202ENST00000394342 TRAF3Q13114 568 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 DDX39BQ13838 428 aaKnown RBP8.04□□□□□ -1.12
APLF-202ENST00000394342 RUNX2Q13950 521 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 NSDHLQ15738 373 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 EXT1Q16394 746 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 CPSF6Q16630 551 aaKnown RBP eCLIP8.04□□□□□ -1.12
APLF-202ENST00000394342 GGTA1PQ4G0N0 100 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 SFT2D3Q587I9 215 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 CRB2Q5IJ48 1285 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 DEPDC1Q5TB30 811 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 KHDRBS2Q5VWX1 349 aaKnown RBP8.04□□□□□ -1.12
APLF-202ENST00000394342 PLAG1Q6DJT9 500 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 ISLR2Q6UXK2 745 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 SH2D5Q6ZV89 423 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 UBE3DQ7Z6J8 389 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 MYLK4Q86YV6 388 aaPredicted RBP8.04□□□□□ -1.12
APLF-202ENST00000394342 ZNF595Q8IYB9 648 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 SHISA5Q8N114 240 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 RBMXL3Q8N7X1 1067 aaKnown RBP8.04□□□□□ -1.12
APLF-202ENST00000394342 ARMC2Q8NEN0 867 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 MYRIPQ8NFW9 859 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 PRR7Q8TB68 274 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 WDR20Q8TBZ3 569 aa8.04□□□□□ -1.12
APLF-202ENST00000394342 BRIX1Q8TDN6 353 aaKnown RBP8.04□□□□□ -1.12
APLF-202ENST00000394342 EPS8L3Q8TE67 593 aaKnown RBP8.04□□□□□ -1.12
APLF-202ENST00000394342 TSLPQ969D9 159 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms