RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 C2CD4DB7Z1M9 353 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 HAT1O14929 419 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 ACADMP11310 421 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 PKLRP30613 574 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 KCTD21Q4G0X4 260 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 SLC30A9Q6PML9 568 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 ZNF793Q6ZN11 406 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 C11orf65Q8NCR3 313 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 C7orf34Q96L11 122 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 FCRL4Q96PJ5 515 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 PCBD2Q9H0N5 130 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 TMEM168Q9H0V1 697 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 TMEM184CQ9NVA4 438 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 MAPRE3Q9UPY8 281 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 PRAMEF25A6NGN4 478 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 M0QX08 132 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 CAPN5O15484 640 aaPredicted RBP14.36□□□□□ -0.11
GPC3-202ENST00000394299 NDUFS4O43181 175 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 B4GALT2O60909 372 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 DDCP20711 480 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 AGXTP21549 392 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 PCSK6P29122 969 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 PRIM2P49643 509 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 SNRPNP63162 240 aaKnown RBP14.36□□□□□ -0.11
GPC3-202ENST00000394299 CTBSQ01459 385 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 PIGFQ07326 219 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 GRSF1Q12849 480 aaKnown RBP eCLIP14.36□□□□□ -0.11
GPC3-202ENST00000394299 HSPB3Q12988 150 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 SIM2Q14190 667 aaPredicted RBP14.36□□□□□ -0.11
GPC3-202ENST00000394299 CTU2Q2VPK5 515 aaKnown RBP14.36□□□□□ -0.11
GPC3-202ENST00000394299 TMEM26Q6ZUK4 368 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 SLC44A3Q8N4M1 653 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 SMYD1Q8NB12 490 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 PJA1Q8NG27 643 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 OR52N2Q8NGI0 321 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 OR2L8Q8NGY9 312 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 DPH7Q9BTV6 452 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 ASPSCR1Q9BZE9 553 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 KCNK12Q9HB15 430 aa14.36□□□□□ -0.11
GPC3-202ENST00000394299 MRPS30Q9NP92 439 aaKnown RBP14.36□□□□□ -0.11
GPC3-202ENST00000394299 IFT80Q9P2H3 777 aaPredicted RBP14.36□□□□□ -0.11
GPC3-202ENST00000394299 SPEGQ15772 3267 aa14.35□□□□□ -0.11
GPC3-202ENST00000394299 SUV39H1O43463 412 aa14.35□□□□□ -0.11
GPC3-202ENST00000394299 HPRP00739 348 aa14.35□□□□□ -0.11
GPC3-202ENST00000394299 EPHA2P29317 976 aa14.35□□□□□ -0.11
GPC3-202ENST00000394299 PCGF2P35227 344 aa14.35□□□□□ -0.11
GPC3-202ENST00000394299 TPMTP51580 245 aa14.35□□□□□ -0.11
GPC3-202ENST00000394299 SCARB2Q14108 478 aa14.35□□□□□ -0.11
GPC3-202ENST00000394299 MYBPC3Q14896 1274 aa14.35□□□□□ -0.11
GPC3-202ENST00000394299 KIAA1614Q5VZ46 1190 aa14.35□□□□□ -0.11
GPC3-202ENST00000394299 SHQ1Q6PI26 577 aaKnown RBP14.35□□□□□ -0.11
GPC3-202ENST00000394299 SFTPA2Q8IWL1 248 aa14.35□□□□□ -0.11
GPC3-202ENST00000394299 SPPL2AQ8TCT8 520 aa14.35□□□□□ -0.11
GPC3-202ENST00000394299 TAMM41Q96BW9 452 aa14.35□□□□□ -0.11
GPC3-202ENST00000394299 C1QTNF7Q9BXJ2 289 aa14.35□□□□□ -0.11
GPC3-202ENST00000394299 ING2Q9H160 280 aa14.35□□□□□ -0.11
GPC3-202ENST00000394299 ADNPQ9H2P0 1102 aa14.35□□□□□ -0.11
GPC3-202ENST00000394299 PREBQ9HCU5 417 aa14.35□□□□□ -0.11
GPC3-202ENST00000394299 TM9SF3Q9HD45 589 aa14.35□□□□□ -0.11
GPC3-202ENST00000394299 USE1Q9NZ43 259 aa14.35□□□□□ -0.11
GPC3-202ENST00000394299 PDP1Q9P0J1 537 aaPredicted RBP14.35□□□□□ -0.11
GPC3-202ENST00000394299 NCKAP1Q9Y2A7 1128 aa14.35□□□□□ -0.11
GPC3-202ENST00000394299 SAMHD1Q9Y3Z3 626 aaKnown RBP14.35□□□□□ -0.11
GPC3-202ENST00000394299 ZNF451Q9Y4E5 1061 aa14.35□□□□□ -0.11
GPC3-202ENST00000394299 A0A087WXM4 84 aa14.34□□□□□ -0.11
GPC3-202ENST00000394299 LOC100130705A0A1B0GUX0 176 aa14.34□□□□□ -0.11
GPC3-202ENST00000394299 TCRBV21S2A2A0A5A6 115 aa14.34□□□□□ -0.11
GPC3-202ENST00000394299 LRIT2A6NDA9 550 aa14.34□□□□□ -0.11
GPC3-202ENST00000394299 TRIM64A6NGJ6 449 aa14.34□□□□□ -0.11
GPC3-202ENST00000394299 SHISA7A6NL88 538 aa14.34□□□□□ -0.11
GPC3-202ENST00000394299 PRICKLE3O43900 615 aaPredicted RBP14.34□□□□□ -0.11
GPC3-202ENST00000394299 FESP07332 822 aa14.34□□□□□ -0.11
GPC3-202ENST00000394299 PPIBP23284 216 aaKnown RBP14.34□□□□□ -0.11
GPC3-202ENST00000394299 MANFP55145 182 aaKnown RBP14.34□□□□□ -0.11
GPC3-202ENST00000394299 LRRC32Q14392 662 aa14.34□□□□□ -0.11
GPC3-202ENST00000394299 GCNT6Q5T4J0 391 aa14.34□□□□□ -0.11
GPC3-202ENST00000394299 LAIR2Q6ISS4 152 aa14.34□□□□□ -0.11
GPC3-202ENST00000394299 TNFAIP8L2Q6P589 184 aaPredicted RBP14.34□□□□□ -0.11
GPC3-202ENST00000394299 SLC44A2Q8IWA5 706 aaPredicted RBP14.34□□□□□ -0.11
GPC3-202ENST00000394299 NCSTNQ92542 709 aa14.34□□□□□ -0.11
GPC3-202ENST00000394299 RGMAQ96B86 450 aa14.34□□□□□ -0.11
GPC3-202ENST00000394299 OR2M4Q96R27 311 aa14.34□□□□□ -0.11
GPC3-202ENST00000394299 RMI1Q9H9A7 625 aa14.34□□□□□ -0.11
GPC3-202ENST00000394299 NDUFA13Q9P0J0 144 aa14.34□□□□□ -0.11
GPC3-202ENST00000394299 ZNF624Q9P2J8 865 aaPredicted RBP14.34□□□□□ -0.11
GPC3-202ENST00000394299 CCDC85CA6NKD9 419 aa14.34□□□□□ -0.11
GPC3-202ENST00000394299 ISM1B1AKI9 464 aa14.34□□□□□ -0.11
GPC3-202ENST00000394299 BMP10O95393 424 aa14.34□□□□□ -0.11
GPC3-202ENST00000394299 CDH2P19022 906 aaPredicted RBP14.34□□□□□ -0.11
GPC3-202ENST00000394299 IGFBP4P22692 258 aa14.34□□□□□ -0.11
GPC3-202ENST00000394299 EEF1B2P24534 225 aaKnown RBP14.34□□□□□ -0.11
GPC3-202ENST00000394299 CDK9P50750 372 aaKnown RBP14.34□□□□□ -0.11
GPC3-202ENST00000394299 SELENOWP63302 87 aa14.34□□□□□ -0.11
GPC3-202ENST00000394299 CD47Q08722 323 aa14.34□□□□□ -0.11
GPC3-202ENST00000394299 HYAL2Q12891 473 aa14.34□□□□□ -0.11
GPC3-202ENST00000394299 PMS2P3Q13401 168 aa14.34□□□□□ -0.11
GPC3-202ENST00000394299 ZNF750Q32MQ0 723 aa14.34□□□□□ -0.11
GPC3-202ENST00000394299 OR4C11Q6IEV9 310 aa14.34□□□□□ -0.11
GPC3-202ENST00000394299 THAP5Q7Z6K1 395 aa14.34□□□□□ -0.11
GPC3-202ENST00000394299 HIPK1Q86Z02 1210 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms