RNA–Protein interactions for RNA: ENST00000392415.6

UBE2E3-201, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene UBE2E3, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-201ENST00000392415 TGM3Q08188 693 aa19.31■□□□□ 0.68
UBE2E3-201ENST00000392415 MRPL49Q13405 166 aaKnown RBP19.31■□□□□ 0.68
UBE2E3-201ENST00000392415 SRFBP1Q8NEF9 429 aaKnown RBP19.31■□□□□ 0.68
UBE2E3-201ENST00000392415 OR7G3Q8NG95 312 aa19.31■□□□□ 0.68
UBE2E3-201ENST00000392415 ZNF354BQ96LW1 612 aa19.31■□□□□ 0.68
UBE2E3-201ENST00000392415 F2RL3Q96RI0 385 aa19.31■□□□□ 0.68
UBE2E3-201ENST00000392415 NECTIN3Q9NQS3 549 aa19.31■□□□□ 0.68
UBE2E3-201ENST00000392415 PRDM7Q9NQW5 492 aa19.31■□□□□ 0.68
UBE2E3-201ENST00000392415 ANGPTL3Q9Y5C1 460 aa19.31■□□□□ 0.68
UBE2E3-201ENST00000392415 TNPO3Q9Y5L0 923 aaKnown RBP19.31■□□□□ 0.68
UBE2E3-201ENST00000392415 RBP1P09455 135 aa19.3■□□□□ 0.68
UBE2E3-201ENST00000392415 COL6A2P12110 1019 aa19.3■□□□□ 0.68
UBE2E3-201ENST00000392415 CERS1P27544 350 aa19.3■□□□□ 0.68
UBE2E3-201ENST00000392415 NR6A1Q15406 480 aa19.3■□□□□ 0.68
UBE2E3-201ENST00000392415 ACER2Q5QJU3 275 aa19.3■□□□□ 0.68
UBE2E3-201ENST00000392415 GRHL2Q6ISB3 625 aa19.3■□□□□ 0.68
UBE2E3-201ENST00000392415 METTL2BQ6P1Q9 378 aaKnown RBP19.3■□□□□ 0.68
UBE2E3-201ENST00000392415 TRMT10CQ7L0Y3 403 aaKnown RBP19.3■□□□□ 0.68
UBE2E3-201ENST00000392415 ARMC2Q8NEN0 867 aa19.3■□□□□ 0.68
UBE2E3-201ENST00000392415 ELP5Q8TE02 316 aa19.3■□□□□ 0.68
UBE2E3-201ENST00000392415 ADAMTS18Q8TE60 1221 aa19.3■□□□□ 0.68
UBE2E3-201ENST00000392415 KCNC2Q96PR1 638 aa19.3■□□□□ 0.68
UBE2E3-201ENST00000392415 CPSF2Q9P2I0 782 aaKnown RBP19.3■□□□□ 0.68
UBE2E3-201ENST00000392415 DAPP1Q9UN19 280 aa19.3■□□□□ 0.68
UBE2E3-201ENST00000392415 OR5H15A6NDH6 313 aa19.29■□□□□ 0.68
UBE2E3-201ENST00000392415 TRIM49D1C9J1S8 452 aa19.29■□□□□ 0.68
UBE2E3-201ENST00000392415 F10P00742 488 aa19.29■□□□□ 0.68
UBE2E3-201ENST00000392415 RHOXF2BP0C7M4 288 aa19.29■□□□□ 0.68
UBE2E3-201ENST00000392415 SERPINB1P30740 379 aa19.29■□□□□ 0.68
UBE2E3-201ENST00000392415 LIM2P55344 173 aa19.29■□□□□ 0.68
UBE2E3-201ENST00000392415 HSD17B7P56937 341 aa19.29■□□□□ 0.68
UBE2E3-201ENST00000392415 MEP1AQ16819 746 aa19.29■□□□□ 0.68
UBE2E3-201ENST00000392415 TSNAXIP1Q2TAA8 658 aa19.29■□□□□ 0.68
UBE2E3-201ENST00000392415 EIF2S3LQ2VIR3 472 aaKnown RBP19.29■□□□□ 0.68
UBE2E3-201ENST00000392415 TMEM35AQ53FP2 167 aa19.29■□□□□ 0.68
UBE2E3-201ENST00000392415 FHL5Q5TD97 284 aa19.29■□□□□ 0.68
UBE2E3-201ENST00000392415 LIPJQ5W064 366 aa19.29■□□□□ 0.68
UBE2E3-201ENST00000392415 UBE3DQ7Z6J8 389 aa19.29■□□□□ 0.68
UBE2E3-201ENST00000392415 SCUBE1Q8IWY4 988 aa19.29■□□□□ 0.68
UBE2E3-201ENST00000392415 CYP4X1Q8N118 509 aa19.29■□□□□ 0.68
UBE2E3-201ENST00000392415 GRHL3Q8TE85 626 aa19.29■□□□□ 0.68
UBE2E3-201ENST00000392415 FAR1Q8WVX9 515 aa19.29■□□□□ 0.68
UBE2E3-201ENST00000392415 MAGEB10Q96LZ2 347 aaPredicted RBP19.29■□□□□ 0.68
UBE2E3-201ENST00000392415 NPAS2Q99743 824 aa19.29■□□□□ 0.68
UBE2E3-201ENST00000392415 RHOXF2Q9BQY4 288 aa19.29■□□□□ 0.68
UBE2E3-201ENST00000392415 TBCDQ9BTW9 1192 aa19.29■□□□□ 0.68
UBE2E3-201ENST00000392415 ROGDIQ9GZN7 287 aa19.29■□□□□ 0.68
UBE2E3-201ENST00000392415 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.29■□□□□ 0.684e-6■□□□□ 10.3
UBE2E3-201ENST00000392415 COPS7BQ9H9Q2 264 aaPredicted RBP19.29■□□□□ 0.68
UBE2E3-201ENST00000392415 PRTFDC1Q9NRG1 225 aa19.29■□□□□ 0.68
UBE2E3-201ENST00000392415 ADGRE2Q9UHX3 823 aa19.29■□□□□ 0.68
UBE2E3-201ENST00000392415 TSC22D4Q9Y3Q8 395 aa19.29■□□□□ 0.68
UBE2E3-201ENST00000392415 CLDN16Q9Y5I7 305 aa19.29■□□□□ 0.68
UBE2E3-201ENST00000392415 SPTAN1Q13813 2472 aaKnown RBP19.29■□□□□ 0.68
UBE2E3-201ENST00000392415 ZGRF1Q86YA3 2104 aa19.29■□□□□ 0.68
UBE2E3-201ENST00000392415 EXOC1LA0A1B0GW35 172 aa19.28■□□□□ 0.68
UBE2E3-201ENST00000392415 LRRC14BA6NHZ5 514 aa19.28■□□□□ 0.68
UBE2E3-201ENST00000392415 SAGE2PA6NJ88 616 aa19.28■□□□□ 0.68
UBE2E3-201ENST00000392415 CYR61O00622 381 aa19.28■□□□□ 0.68
UBE2E3-201ENST00000392415 CLDN4O14493 209 aa19.28■□□□□ 0.68
UBE2E3-201ENST00000392415 RIPK2O43353 540 aa19.28■□□□□ 0.68
UBE2E3-201ENST00000392415 UGDHO60701 494 aa19.28■□□□□ 0.68
UBE2E3-201ENST00000392415 SIX3O95343 332 aaPredicted RBP19.28■□□□□ 0.68
UBE2E3-201ENST00000392415 TGFB1P01137 390 aa19.28■□□□□ 0.68
UBE2E3-201ENST00000392415 SNRPAP09012 282 aaKnown RBP19.28■□□□□ 0.68
UBE2E3-201ENST00000392415 PCNAP12004 261 aa19.28■□□□□ 0.68
UBE2E3-201ENST00000392415 HNRNPFP52597 415 aaKnown RBP19.28■□□□□ 0.68
UBE2E3-201ENST00000392415 GTF2H2Q13888 395 aa19.28■□□□□ 0.68
UBE2E3-201ENST00000392415 RCN2Q14257 317 aa19.28■□□□□ 0.68
UBE2E3-201ENST00000392415 FCRLBQ6BAA4 426 aa19.28■□□□□ 0.68
UBE2E3-201ENST00000392415 GTF2H2CQ6P1K8 395 aa19.28■□□□□ 0.68
UBE2E3-201ENST00000392415 CHSY3Q70JA7 882 aa19.28■□□□□ 0.68
UBE2E3-201ENST00000392415 CRLF3Q8IUI8 442 aa19.28■□□□□ 0.68
UBE2E3-201ENST00000392415 ZNF595Q8IYB9 648 aa19.28■□□□□ 0.68
UBE2E3-201ENST00000392415 SLC5A8Q8N695 610 aa19.28■□□□□ 0.68
UBE2E3-201ENST00000392415 TMEM52Q8NDY8 209 aa19.28■□□□□ 0.68
UBE2E3-201ENST00000392415 NFAM1Q8NET5 270 aaPredicted RBP19.28■□□□□ 0.68
UBE2E3-201ENST00000392415 CMTM7Q96FZ5 175 aa19.28■□□□□ 0.68
UBE2E3-201ENST00000392415 XPR1Q9UBH6 696 aa19.28■□□□□ 0.68
UBE2E3-201ENST00000392415 TMCO1Q9UM00 188 aa19.28■□□□□ 0.68
UBE2E3-201ENST00000392415 MRPS33Q9Y291 106 aaKnown RBP19.28■□□□□ 0.68
UBE2E3-201ENST00000392415 ANKUB1A6NFN9 424 aa19.27■□□□□ 0.68
UBE2E3-201ENST00000392415 E2F3O00716 465 aa19.27■□□□□ 0.68
UBE2E3-201ENST00000392415 SCELO95171 688 aa19.27■□□□□ 0.68
UBE2E3-201ENST00000392415 FAM153BP0C7A2 387 aa19.27■□□□□ 0.68
UBE2E3-201ENST00000392415 GCAP28676 217 aa19.27■□□□□ 0.68
UBE2E3-201ENST00000392415 PIK3CBP42338 1070 aa19.27■□□□□ 0.68
UBE2E3-201ENST00000392415 PIK3CGP48736 1102 aa19.27■□□□□ 0.68
UBE2E3-201ENST00000392415 TAS2R50P59544 299 aa19.27■□□□□ 0.68
UBE2E3-201ENST00000392415 INAQ16352 499 aa19.27■□□□□ 0.68
UBE2E3-201ENST00000392415 FAM153CQ494X1 144 aa19.27■□□□□ 0.68
UBE2E3-201ENST00000392415 DEPDC1Q5TB30 811 aa19.27■□□□□ 0.68
UBE2E3-201ENST00000392415 LGSNQ5TDP6 509 aa19.27■□□□□ 0.68
UBE2E3-201ENST00000392415 ADGRD1Q6QNK2 874 aa19.27■□□□□ 0.68
UBE2E3-201ENST00000392415 ZNF793Q6ZN11 406 aa19.27■□□□□ 0.68
UBE2E3-201ENST00000392415 GOLGA7Q7Z5G4 137 aa19.27■□□□□ 0.68
UBE2E3-201ENST00000392415 LGI4Q8N135 537 aa19.27■□□□□ 0.68
UBE2E3-201ENST00000392415 BEST3Q8N1M1 668 aa19.27■□□□□ 0.68
UBE2E3-201ENST00000392415 PTGR2Q8N8N7 351 aaPredicted RBP19.27■□□□□ 0.68
UBE2E3-201ENST00000392415 HUS1BQ8NHY5 278 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms