RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 IGKV3D-11A0A0A0MRZ8 115 aa11.91□□□□□ -0.5
GGPS1-203ENST00000391855 TCRBV16S1A1N1A0A5B0 115 aa11.91□□□□□ -0.5
GGPS1-203ENST00000391855 CDK2AP1O14519 115 aa11.91□□□□□ -0.5
GGPS1-203ENST00000391855 B4GALT2O60909 372 aa11.91□□□□□ -0.5
GGPS1-203ENST00000391855 SEC24DO94855 1032 aaPredicted RBP11.91□□□□□ -0.5
GGPS1-203ENST00000391855 SIX3O95343 332 aaPredicted RBP11.91□□□□□ -0.5
GGPS1-203ENST00000391855 RPS17P08708 135 aaKnown RBP11.91□□□□□ -0.5
GGPS1-203ENST00000391855 CD97P48960 835 aa11.91□□□□□ -0.5
GGPS1-203ENST00000391855 CCNG1P51959 295 aa11.91□□□□□ -0.5
GGPS1-203ENST00000391855 AP5B1Q2VPB7 878 aa11.91□□□□□ -0.5
GGPS1-203ENST00000391855 BTBD16Q32M84 506 aa11.91□□□□□ -0.5
GGPS1-203ENST00000391855 GGTA1PQ4G0N0 100 aa11.91□□□□□ -0.5
GGPS1-203ENST00000391855 DEPDC1Q5TB30 811 aa11.91□□□□□ -0.5
GGPS1-203ENST00000391855 KHDRBS2Q5VWX1 349 aaKnown RBP11.91□□□□□ -0.5
GGPS1-203ENST00000391855 ADNP2Q6IQ32 1131 aa11.91□□□□□ -0.5
GGPS1-203ENST00000391855 ZNF595Q8IYB9 648 aa11.91□□□□□ -0.5
GGPS1-203ENST00000391855 HUS1BQ8NHY5 278 aa11.91□□□□□ -0.5
GGPS1-203ENST00000391855 BRIX1Q8TDN6 353 aaKnown RBP11.91□□□□□ -0.5
GGPS1-203ENST00000391855 PSMF1Q92530 271 aa11.91□□□□□ -0.5
GGPS1-203ENST00000391855 TSLPQ969D9 159 aa11.91□□□□□ -0.5
GGPS1-203ENST00000391855 MIB2Q96AX9 1013 aa11.91□□□□□ -0.5
GGPS1-203ENST00000391855 PHF21BQ96EK2 531 aa11.91□□□□□ -0.5
GGPS1-203ENST00000391855 NTMT1Q9BV86 223 aa11.91□□□□□ -0.5
GGPS1-203ENST00000391855 SLC29A3Q9BZD2 475 aa11.91□□□□□ -0.5
GGPS1-203ENST00000391855 RNF32Q9H0A6 362 aa11.91□□□□□ -0.5
GGPS1-203ENST00000391855 ANKZF1Q9H8Y5 726 aa11.91□□□□□ -0.5
GGPS1-203ENST00000391855 LYRM4Q9HD34 91 aa11.91□□□□□ -0.5
GGPS1-203ENST00000391855 DMRT3Q9NQL9 472 aa11.91□□□□□ -0.5
GGPS1-203ENST00000391855 PRDM7Q9NQW5 492 aa11.91□□□□□ -0.5
GGPS1-203ENST00000391855 DAPP1Q9UN19 280 aa11.91□□□□□ -0.5
GGPS1-203ENST00000391855 BSNQ9UPA5 3926 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 FASNP49327 2511 aaKnown RBP11.9□□□□□ -0.5
GGPS1-203ENST00000391855 A0A0G2JN53 185 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 DYTNA2CJ06 578 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 A8MT66 165 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 CDH16O75309 829 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 GLRA3O75311 464 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 HIST1H1TP22492 207 aaPredicted RBP11.9□□□□□ -0.5
GGPS1-203ENST00000391855 CERS1P27544 350 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 ARL1P40616 181 aaPredicted RBP11.9□□□□□ -0.5
GGPS1-203ENST00000391855 SSR2P43308 183 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 RAP1GDS1P52306 607 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 LIM2P55344 173 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 SLC26A5P58743 744 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 TAS2R50P59544 299 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 NAA20P61599 178 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 KCNC4Q03721 635 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 RUNX2Q13950 521 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 TLR1Q15399 786 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 TERF2Q15554 542 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 ABHD17BQ5VST6 288 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 SLC22A9Q8IVM8 553 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 SCUBE1Q8IWY4 988 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 Q8NA96 180 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 MYRIPQ8NFW9 859 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 CPT1CQ8TCG5 803 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 MZB1Q8WU39 189 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 RGMAQ96B86 450 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 F2RL3Q96RI0 385 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 NOL11Q9H8H0 719 aaKnown RBP11.9□□□□□ -0.5
GGPS1-203ENST00000391855 PRTFDC1Q9NRG1 225 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 MS4A12Q9NXJ0 267 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 ABI3Q9P2A4 366 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 PTGFRNQ9P2B2 879 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 DCDC2Q9UHG0 476 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 STK38LQ9Y2H1 464 aa11.9□□□□□ -0.5
GGPS1-203ENST00000391855 DOCK10Q96BY6 2186 aa11.9□□□□□ -0.51
GGPS1-203ENST00000391855 IGHV3-20A0A0C4DH32 117 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 LRRC14BA6NHZ5 514 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 SAGE2PA6NJ88 616 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 ESPNB1AK53 854 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 FOXE1O00358 373 aaPredicted RBP11.89□□□□□ -0.51
GGPS1-203ENST00000391855 OR7A17O14581 309 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 DNAJB6O75190 326 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 SEMA3DO95025 777 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 OTCP00480 354 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 TGFB1P01137 390 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 ITGAMP11215 1152 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 ATP5F1P24539 256 aaPredicted RBP11.89□□□□□ -0.51
GGPS1-203ENST00000391855 ATP5A1P25705 553 aaKnown RBP11.89□□□□□ -0.51
GGPS1-203ENST00000391855 PTX3P26022 381 aaPredicted RBP11.89□□□□□ -0.51
GGPS1-203ENST00000391855 ARG2P78540 354 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 TRAF3Q13114 568 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 CUL3Q13618 768 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 DDX39BQ13838 428 aaKnown RBP11.89□□□□□ -0.51
GGPS1-203ENST00000391855 ZNF169Q14929 603 aaPredicted RBP11.89□□□□□ -0.51
GGPS1-203ENST00000391855 CPSF6Q16630 551 aaKnown RBP eCLIP11.89□□□□□ -0.51
GGPS1-203ENST00000391855 WDR93Q6P2C0 686 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 EMBQ6PCB8 327 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 LINC00696Q6ZRV3 163 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 SHISA5Q8N114 240 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 LGI4Q8N135 537 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 ZCCHC7Q8N3Z6 543 aaKnown RBP11.89□□□□□ -0.51
GGPS1-203ENST00000391855 RIBC1Q8N443 379 aaPredicted RBP11.89□□□□□ -0.51
GGPS1-203ENST00000391855 TMEM151AQ8N4L1 468 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 SIRT6Q8N6T7 355 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 ACOT4Q8N9L9 421 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 DNAJB14Q8TBM8 379 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 WDR20Q8TBZ3 569 aa11.89□□□□□ -0.51
GGPS1-203ENST00000391855 ZNF483Q8TF39 744 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms