RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 PSD3Q9NYI0 1048 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 TMEM9Q9P0T7 183 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 LUZP4Q9P127 313 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 ORC3Q9UBD5 711 aaPredicted RBP0.27□□□□□ -2.37
SNORD28-201ENST00000384706 SLC24A2Q9UI40 661 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 SATB2Q9UPW6 733 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 PSG11Q9UQ72 335 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 RNF24Q9Y225 148 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 NCKAP1Q9Y2A7 1128 aa0.27□□□□□ -2.37
SNORD28-201ENST00000384706 PTRH2Q9Y3E5 179 aaKnown RBP0.27□□□□□ -2.37
SNORD28-201ENST00000384706 COL5A1P20908 1838 aaPredicted RBP0.27□□□□□ -2.37
SNORD28-201ENST00000384706 KIAA1217Q5T5P2 1943 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 FBN3Q75N90 2809 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 FBN1P35555 2871 aaKnown RBP0.26□□□□□ -2.37
SNORD28-201ENST00000384706 IGLV4-60A0A075B6I1 120 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 LOC102723996A0A087X1L8 192 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 A0A0G2JLM5 398 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 A0A1B0GUA9 196 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 A0A1W2PQ09 198 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 FSD2A1L4K1 749 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 MFSD2BA6NFX1 497 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 SLC15A5A6NIM6 579 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 A8MX80 341 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 C17orf105B2RV13 164 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 E5RGE8 158 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 NEDD8-MDP1E9PL57 170 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 LMO7DNF2Z398 122 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 TRIM77I1YAP6 450 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 MCF2LO15068 1137 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 MLNRO43193 412 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 FRAT2O75474 233 aaPredicted RBP0.26□□□□□ -2.37
SNORD28-201ENST00000384706 TMEM63AO94886 807 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 DUSP14O95147 198 aaKnown RBP0.26□□□□□ -2.37
SNORD28-201ENST00000384706 ANGPTL1O95841 491 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 AGR2O95994 175 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 PENKP01210 267 aaPredicted RBP0.26□□□□□ -2.37
SNORD28-201ENST00000384706 IGLV3-19P01714 112 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 IGKV4-1P06312 121 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 CSN3P07498 182 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 LINGO3P0C6S8 592 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 STAG3L1P0CL83 205 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 P4HA1P13674 534 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 EPCAMP16422 314 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 CD22P20273 847 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 PSMB1P20618 241 aaKnown RBP0.26□□□□□ -2.37
SNORD28-201ENST00000384706 CHMP24386 653 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 CCNE1P24864 410 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 PPP2R1AP30153 589 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 PPP2R1BP30154 601 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 GCH1P30793 250 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 HTR1FP30939 366 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 RBMXP38159 391 aaKnown RBP0.26□□□□□ -2.37
SNORD28-201ENST00000384706 ID1P41134 155 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 OR3A4PP47883 348 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 NRIP1P48552 1158 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 STAT2P52630 851 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 DIO3P55073 304 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 CLDN15P56746 228 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 CLDN17P56750 224 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 ZNF45Q02386 682 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 CACNG1Q06432 222 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 AIMP2Q13155 320 aaKnown RBP0.26□□□□□ -2.37
SNORD28-201ENST00000384706 ORC2Q13416 577 aaPredicted RBP0.26□□□□□ -2.37
SNORD28-201ENST00000384706 SLC10A1Q14973 349 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 TGIF1Q15583 401 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 MPPED2Q15777 294 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 LY6EQ16553 131 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 RBBP7Q16576 425 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 KYAT1Q16773 422 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 CBWD6Q4V339 395 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 C14orf28Q4W4Y0 310 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 LACTB2Q53H82 288 aaPredicted RBP0.26□□□□□ -2.37
SNORD28-201ENST00000384706 PAN3Q58A45 887 aaKnown RBP0.26□□□□□ -2.37
SNORD28-201ENST00000384706 ZNF542PQ5EBM4 170 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 RAB41Q5JT25 222 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 CBWD3Q5JTY5 395 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 DDX59Q5T1V6 619 aaKnown RBP eCLIP0.26□□□□□ -2.37
SNORD28-201ENST00000384706 KRT39Q6A163 491 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 NAA16Q6N069 864 aaPredicted RBP0.26□□□□□ -2.37
SNORD28-201ENST00000384706 TATDN1Q6P1N9 297 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 FUT10Q6P4F1 479 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 IGFL1Q6UW32 110 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 GCNT7Q6ZNI0 430 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 ZBTB49Q6ZSB9 765 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 RFPL4BQ6ZWI9 263 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 NOL8Q76FK4 1167 aaKnown RBP0.26□□□□□ -2.37
SNORD28-201ENST00000384706 KRT77Q7Z794 578 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 ADAMTSL2Q86TH1 951 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 CROCCP3Q8IVE0 287 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 MFN1Q8IWA4 741 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 TMEM61Q8N0U2 210 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 GPR137CQ8N3F9 429 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 FBXW8Q8N3Y1 598 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 PRSS35Q8N3Z0 413 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 TEX26Q8N6G2 289 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 ANKRD13CQ8N6S4 541 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 Q8N9G6 341 aaPredicted RBP0.26□□□□□ -2.37
SNORD28-201ENST00000384706 LINC01555Q8NAE3 123 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 SLC4A11Q8NBS3 891 aa0.26□□□□□ -2.37
SNORD28-201ENST00000384706 APPL2Q8NEU8 664 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms