RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 TAAR2Q9P1P5 351 aa22.06■■□□□ 1.12
VPS16-201ENST00000380443 TMEFF2Q9UIK5 374 aaPredicted RBP22.06■■□□□ 1.12
VPS16-201ENST00000380443 ABCG2Q9UNQ0 655 aa22.06■■□□□ 1.12
VPS16-201ENST00000380443 GPSM3Q9Y4H4 160 aa22.06■■□□□ 1.12
VPS16-201ENST00000380443 COLEC10Q9Y6Z7 277 aa22.06■■□□□ 1.12
VPS16-201ENST00000380443 NDUFS4O43181 175 aa22.05■■□□□ 1.12
VPS16-201ENST00000380443 OR1F1O43749 312 aa22.05■■□□□ 1.12
VPS16-201ENST00000380443 KLF8O95600 359 aaPredicted RBP22.05■■□□□ 1.12
VPS16-201ENST00000380443 NUDT7P0C024 238 aa22.05■■□□□ 1.12
VPS16-201ENST00000380443 GABARAPL2P60520 117 aa22.05■■□□□ 1.12
VPS16-201ENST00000380443 TFF2Q03403 129 aa22.05■■□□□ 1.12
VPS16-201ENST00000380443 DYNC1I2Q13409 638 aaKnown RBP22.05■■□□□ 1.12
VPS16-201ENST00000380443 SETD9Q8NE22 299 aa22.05■■□□□ 1.12
VPS16-201ENST00000380443 OR2A1Q8NGT9 310 aa22.05■■□□□ 1.12
VPS16-201ENST00000380443 SIPA1Q96FS4 1042 aa22.05■■□□□ 1.12
VPS16-201ENST00000380443 CNDP2Q96KP4 475 aaKnown RBP22.05■■□□□ 1.12
VPS16-201ENST00000380443 C7orf34Q96L11 122 aa22.05■■□□□ 1.12
VPS16-201ENST00000380443 AMBRA1Q9C0C7 1298 aa22.05■■□□□ 1.12
VPS16-201ENST00000380443 DDX31Q9H8H2 851 aaKnown RBP22.05■■□□□ 1.12
VPS16-201ENST00000380443 NEUROD4Q9HD90 331 aa22.05■■□□□ 1.12
VPS16-201ENST00000380443 GPATCH2Q9NW75 528 aa22.05■■□□□ 1.12
VPS16-201ENST00000380443 KCNK6Q9Y257 313 aa22.05■■□□□ 1.12
VPS16-201ENST00000380443 IGFBP5P24593 272 aa22.04■■□□□ 1.12
VPS16-201ENST00000380443 KCNJ10P78508 379 aa22.04■■□□□ 1.12
VPS16-201ENST00000380443 VLDLRP98155 873 aa22.04■■□□□ 1.12
VPS16-201ENST00000380443 SCARB2Q14108 478 aa22.04■■□□□ 1.12
VPS16-201ENST00000380443 C16orf72Q14CZ0 275 aa22.04■■□□□ 1.12
VPS16-201ENST00000380443 KDM4DQ6B0I6 523 aa22.04■■□□□ 1.12
VPS16-201ENST00000380443 DUS1LQ6P1R4 473 aaKnown RBP22.04■■□□□ 1.12
VPS16-201ENST00000380443 ZNF773Q6PK81 442 aa22.04■■□□□ 1.12
VPS16-201ENST00000380443 ANGPTL8Q6UXH0 198 aa22.04■■□□□ 1.12
VPS16-201ENST00000380443 WASH2PQ6VEQ5 465 aa22.04■■□□□ 1.12
VPS16-201ENST00000380443 PIK3C3Q8NEB9 887 aa22.04■■□□□ 1.12
VPS16-201ENST00000380443 NMD3Q96D46 503 aaKnown RBP22.04■■□□□ 1.12
VPS16-201ENST00000380443 SARGQ9BW04 601 aa22.04■■□□□ 1.12
VPS16-201ENST00000380443 EPS8L2Q9H6S3 715 aa22.04■■□□□ 1.12
VPS16-201ENST00000380443 KIR3DX1Q9H7L2 352 aa22.04■■□□□ 1.12
VPS16-201ENST00000380443 TAS2R7Q9NYW3 318 aa22.04■■□□□ 1.12
VPS16-201ENST00000380443 PCDHGB3Q9Y5G1 929 aa22.04■■□□□ 1.12
VPS16-201ENST00000380443 TICRRQ7Z2Z1 1910 aa22.04■■□□□ 1.12
VPS16-201ENST00000380443 NUP214P35658 2090 aaPredicted RBP22.03■■□□□ 1.12
VPS16-201ENST00000380443 PRR23AA6NEV1 266 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 H3BSA7 217 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 EGFP01133 1207 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 DRD2P14416 443 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 FRKP42685 505 aaPredicted RBP22.03■■□□□ 1.12
VPS16-201ENST00000380443 GRSF1Q12849 480 aaKnown RBP eCLIP22.03■■□□□ 1.12
VPS16-201ENST00000380443 CLCA4Q14CN2 919 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 MLC1Q15049 377 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 CRB2Q5IJ48 1285 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 VTCN1Q7Z7D3 282 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 HS3ST5Q8IZT8 346 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 SMRP1Q8NCR6 262 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 OR2M4Q96R27 311 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 RAPGEFL1Q9UHV5 662 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 ANGPT4Q9Y264 503 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 PDZK1P1A8MUH7 402 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 PDPK1O15530 556 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 PRICKLE3O43900 615 aaPredicted RBP22.03■■□□□ 1.12
VPS16-201ENST00000380443 JRKO75564 520 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 C9P02748 559 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 ARAFP10398 606 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 ETFAP13804 333 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 ITGA2P17301 1181 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 PSMB5P28074 263 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 SHMT2P34897 504 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 AHRP35869 848 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 CDK6Q00534 326 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 EEF1A2Q05639 463 aaKnown RBP22.03■■□□□ 1.12
VPS16-201ENST00000380443 SMAD4Q13485 552 aaKnown RBP22.03■■□□□ 1.12
VPS16-201ENST00000380443 KEAP1Q14145 624 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 RPE65Q16518 533 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 IQCCQ4KMZ1 466 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 ZNF691Q5VV52 312 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 BROXQ5VW32 411 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 TPD52L3Q96J77 140 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 NPLQ9BXD5 320 aaPredicted RBP22.03■■□□□ 1.12
VPS16-201ENST00000380443 MRPS30Q9NP92 439 aaKnown RBP22.03■■□□□ 1.12
VPS16-201ENST00000380443 ACSS1Q9NUB1 689 aaPredicted RBP22.03■■□□□ 1.12
VPS16-201ENST00000380443 VNN3Q9NY84 501 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 MOSPD1Q9UJG1 213 aa22.03■■□□□ 1.12
VPS16-201ENST00000380443 SAMHD1Q9Y3Z3 626 aaKnown RBP22.03■■□□□ 1.12
VPS16-201ENST00000380443 SPTBN5Q9NRC6 3674 aaKnown RBP22.03■■□□□ 1.12
VPS16-201ENST00000380443 MYO1GB0I1T2 1018 aa22.02■■□□□ 1.12
VPS16-201ENST00000380443 APBB3O95704 486 aa22.02■■□□□ 1.12
VPS16-201ENST00000380443 JUNBP17275 347 aaPredicted RBP22.02■■□□□ 1.12
VPS16-201ENST00000380443 COL9A1P20849 921 aa22.02■■□□□ 1.12
VPS16-201ENST00000380443 MAGEA8P43361 318 aa22.02■■□□□ 1.12
VPS16-201ENST00000380443 SLC5A12Q1EHB4 618 aa22.02■■□□□ 1.12
VPS16-201ENST00000380443 IFI44LQ53G44 452 aa22.02■■□□□ 1.12
VPS16-201ENST00000380443 COX20Q5RI15 118 aa22.02■■□□□ 1.12
VPS16-201ENST00000380443 C6orf141Q5SZD1 244 aa22.02■■□□□ 1.12
VPS16-201ENST00000380443 CWF19L1Q69YN2 538 aaKnown RBP22.02■■□□□ 1.12
VPS16-201ENST00000380443 OR4C11Q6IEV9 310 aa22.02■■□□□ 1.12
VPS16-201ENST00000380443 TRIM69Q86WT6 500 aa22.02■■□□□ 1.12
VPS16-201ENST00000380443 ADGRF3Q8IZF5 1079 aa22.02■■□□□ 1.12
VPS16-201ENST00000380443 OR52E1Q8NGJ3 308 aa22.02■■□□□ 1.12
VPS16-201ENST00000380443 OR10Q1Q8NGQ4 319 aa22.02■■□□□ 1.12
VPS16-201ENST00000380443 CREB3L4Q8TEY5 395 aa22.02■■□□□ 1.12
VPS16-201ENST00000380443 NEURL3Q96EH8 262 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms