RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 IPCEF1Q8WWN9 437 aaPredicted RBP12.67□□□□□ -0.38
NPHP4-203ENST00000378169 NCSTNQ92542 709 aa12.67□□□□□ -0.38
NPHP4-203ENST00000378169 CAMK1GQ96NX5 476 aa12.67□□□□□ -0.38
NPHP4-203ENST00000378169 FAM129BQ96TA1 746 aa12.67□□□□□ -0.38
NPHP4-203ENST00000378169 KCNK12Q9HB15 430 aa12.67□□□□□ -0.38
NPHP4-203ENST00000378169 PNO1Q9NRX1 252 aaKnown RBP12.67□□□□□ -0.38
NPHP4-203ENST00000378169 CLEC4EQ9ULY5 219 aa12.67□□□□□ -0.38
NPHP4-203ENST00000378169 USP22Q9UPT9 525 aa12.67□□□□□ -0.38
NPHP4-203ENST00000378169 CLCA3PQ9Y6N3 262 aa12.67□□□□□ -0.38
NPHP4-203ENST00000378169 COL4A5P29400 1685 aa12.67□□□□□ -0.38
NPHP4-203ENST00000378169 INMTO95050 263 aa12.67□□□□□ -0.38
NPHP4-203ENST00000378169 GGT1P19440 569 aa12.67□□□□□ -0.38
NPHP4-203ENST00000378169 RPP38P78345 283 aaKnown RBP12.67□□□□□ -0.38
NPHP4-203ENST00000378169 MC1RQ01726 317 aa12.67□□□□□ -0.38
NPHP4-203ENST00000378169 KCNC4Q03721 635 aa12.67□□□□□ -0.38
NPHP4-203ENST00000378169 IL18Q14116 193 aa12.67□□□□□ -0.38
NPHP4-203ENST00000378169 NNATQ16517 81 aa12.67□□□□□ -0.38
NPHP4-203ENST00000378169 SLC30A6Q6NXT4 461 aa12.67□□□□□ -0.38
NPHP4-203ENST00000378169 HSDL2Q6YN16 418 aa12.67□□□□□ -0.38
NPHP4-203ENST00000378169 C6orf120Q7Z4R8 191 aa12.67□□□□□ -0.38
NPHP4-203ENST00000378169 CARM1Q86X55 608 aa12.67□□□□□ -0.38
NPHP4-203ENST00000378169 ZNF761Q86XN6 746 aaPredicted RBP12.67□□□□□ -0.38
NPHP4-203ENST00000378169 NATD1Q8N6N6 113 aa12.67□□□□□ -0.38
NPHP4-203ENST00000378169 FRS2Q8WU20 508 aa12.67□□□□□ -0.38
NPHP4-203ENST00000378169 METTL21AQ8WXB1 218 aa12.67□□□□□ -0.38
NPHP4-203ENST00000378169 COQ7Q99807 217 aa12.67□□□□□ -0.38
NPHP4-203ENST00000378169 MACROD1Q9BQ69 325 aa12.67□□□□□ -0.38
NPHP4-203ENST00000378169 DOHHQ9BU89 302 aa12.67□□□□□ -0.38
NPHP4-203ENST00000378169 SLC17A9Q9BYT1 436 aa12.67□□□□□ -0.38
NPHP4-203ENST00000378169 IL1RAPQ9NPH3 570 aa12.67□□□□□ -0.38
NPHP4-203ENST00000378169 COMMD3Q9UBI1 195 aa12.67□□□□□ -0.38
NPHP4-203ENST00000378169 MRTO4Q9UKD2 239 aaKnown RBP12.67□□□□□ -0.38
NPHP4-203ENST00000378169 CPED1A4D0V7 1026 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 TACR1P25103 407 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 PSMA3P25788 255 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 CTGFP29279 349 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 PSMD7P51665 324 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 TUBA4AP68366 448 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 CDKL1Q00532 357 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 NDUFAF6Q330K2 333 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 EOGTQ5NDL2 527 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 SLC35F1Q5T1Q4 408 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 PLET1Q6UQ28 207 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 C11orf24Q96F05 449 aaPredicted RBP12.66□□□□□ -0.38
NPHP4-203ENST00000378169 IL21RQ9HBE5 538 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 FAM240BA0A1B0GVZ2 78 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 TMEM150CB9EJG8 249 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 RCVRNP35243 200 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 VBP1P61758 197 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 IRAK1BP1Q5VVH5 260 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 TMC8Q8IU68 726 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 NAGSQ8N159 534 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 BCL7CQ8WUZ0 217 aaPredicted RBP12.66□□□□□ -0.38
NPHP4-203ENST00000378169 FEVQ99581 238 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 SORBS1Q9BX66 1292 aaKnown RBP12.66□□□□□ -0.38
NPHP4-203ENST00000378169 NKX2-4Q9H2Z4 354 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 DZANK1Q9NVP4 752 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 MRPL39Q9NYK5 338 aaKnown RBP12.66□□□□□ -0.38
NPHP4-203ENST00000378169 MAFFQ9ULX9 164 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 POLR2AP24928 1970 aaKnown RBP12.66□□□□□ -0.38
NPHP4-203ENST00000378169 THSD7AQ9UPZ6 1657 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 XKRYO14609 159 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 ACADLP28330 430 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 NTSR1P30989 418 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 SOX9P48436 509 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 ENTPD1P49961 510 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 MYBPC3Q14896 1274 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 QPRTQ15274 297 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 COLEC12Q5KU26 742 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 FRRS1Q6ZNA5 592 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 SLC30A8Q8IWU4 369 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 NRSN1Q8IZ57 195 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 ANKFN1Q8N957 763 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 ZNF354BQ96LW1 612 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 TSSK6Q9BXA6 273 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 MCUBQ9NWR8 336 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 CDC14AQ9UNH5 594 aa12.66□□□□□ -0.38
NPHP4-203ENST00000378169 IRGMA1A4Y4 181 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 H3BQ06 376 aaPredicted RBP12.65□□□□□ -0.38
NPHP4-203ENST00000378169 CYP17A1P05093 508 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 SHMT2P34897 504 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 IL12RB1P42701 662 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 MLLT10P55197 1068 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 VSX2P58304 361 aaPredicted RBP12.65□□□□□ -0.38
NPHP4-203ENST00000378169 LRRC26Q2I0M4 334 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 JAZF1Q86VZ6 243 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 ADGRG5Q8IZF4 528 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.65□□□□□ -0.38
NPHP4-203ENST00000378169 LMX1AQ8TE12 382 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 FCGR1BQ92637 280 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 HSPBAP1Q96EW2 488 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 WDR92Q96MX6 357 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 TCRBV21S2A2A0A5A6 115 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 OR6C74A6NCV1 312 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 SCAMP2O15127 329 aaKnown RBP12.65□□□□□ -0.38
NPHP4-203ENST00000378169 IGLV3-25P01717 112 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 PABPC4LP0CB38 370 aaKnown RBP12.65□□□□□ -0.38
NPHP4-203ENST00000378169 BMP2P12643 396 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 MAP2K4P45985 399 aa12.65□□□□□ -0.38
NPHP4-203ENST00000378169 IL18R1Q13478 541 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms