RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 TRAM2Q15035 370 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 KHDRBS2Q5VWX1 349 aaKnown RBP8.44□□□□□ -1.06
PCDH9-202ENST00000377865 PLAG1Q6DJT9 500 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 FUNDC1Q8IVP5 155 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 SLC5A8Q8N695 610 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 TMIEQ8NEW7 156 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 TNFAIP8L1Q8WVP5 186 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 KHSRPQ92945 711 aaKnown RBP eCLIP8.44□□□□□ -1.064e-7■■■■□ 22.2
PCDH9-202ENST00000377865 RHBDF1Q96CC6 855 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 IFT27Q9BW83 186 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 TTLL2Q9BWV7 592 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 MTIF3Q9H2K0 278 aaKnown RBP8.44□□□□□ -1.06
PCDH9-202ENST00000377865 FBXO8Q9NRD0 319 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 MARK1Q9P0L2 795 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 COPZ2Q9P299 210 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 EXTL2Q9UBQ6 330 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 SRRDQ9UH36 339 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 DNAJC25-GNG10A0A024R161 153 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 MTMR11A4FU01 709 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 RCBTB2O95199 551 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 ADH1CP00326 375 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 HLA-DQA2P01906 255 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 RB1P06400 928 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 ADH1AP07327 375 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 CHRM5P08912 532 aaPredicted RBP8.44□□□□□ -1.06
PCDH9-202ENST00000377865 OSMP13725 252 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 ACVR2AP27037 513 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 HOXC13P31276 330 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 RPA4Q13156 261 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 ATP6V1C2Q8NEY4 427 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 DEDD2Q8WXF8 326 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 SLC27A6Q9Y2P4 619 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 ABHD14A-ACY1A0A1B0GW23 586 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 TMEM221A6NGB7 291 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 SAP18O00422 153 aaKnown RBP8.44□□□□□ -1.06
PCDH9-202ENST00000377865 PTGESO14684 152 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 PROM1O43490 865 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 CNMDO75829 334 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 ACADMP11310 421 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 CKMT1AP12532 417 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 BIKQ13323 160 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 GINS1Q14691 196 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 SLC9A5Q14940 896 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 RGNQ15493 299 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 ATAD3CQ5T2N8 411 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 MANEALQ5VSG8 457 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 GDF6Q6KF10 455 aaPredicted RBP8.44□□□□□ -1.06
PCDH9-202ENST00000377865 VTCN1Q7Z7D3 282 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 IQCHQ86VS3 1027 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 TICAM1Q8IUC6 712 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 SHKBP1Q8TBC3 707 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 GTF2H4Q92759 462 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 ZFP3Q96NJ6 502 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 CPPED1Q9BRF8 314 aaPredicted RBP8.44□□□□□ -1.06
PCDH9-202ENST00000377865 LGR4Q9BXB1 951 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 COMMD4Q9H0A8 199 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 RBM38Q9H0Z9 239 aaKnown RBP8.44□□□□□ -1.06
PCDH9-202ENST00000377865 NLGN3Q9NZ94 848 aa8.44□□□□□ -1.06
PCDH9-202ENST00000377865 NFKBIEO00221 500 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 OR10H2O60403 315 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 MT-ND5P03915 603 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 LAG3P18627 525 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 CPN2P22792 545 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 HMGCLP35914 325 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 UBXN11Q5T124 520 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 C22orf42Q6IC83 251 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 RTL4Q6ZR62 310 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 AMIGO1Q86WK6 493 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 METTL4Q8N3J2 472 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 CLDN19Q8N6F1 224 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 ZNF566Q969W8 418 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 PSD2Q9BQI7 771 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 GABARAPL1Q9H0R8 117 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 KLHL42Q9P2K6 505 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 M0R233 179 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 UBFD1O14562 309 aaKnown RBP8.43□□□□□ -1.06
PCDH9-202ENST00000377865 PUDPQ08623 228 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 HSF5Q4G112 596 aaPredicted RBP8.43□□□□□ -1.06
PCDH9-202ENST00000377865 GPRC6AQ5T6X5 926 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 HACD4Q5VWC8 232 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 GTF2IRD2BQ6EKJ0 949 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 DPY19L3Q6ZPD9 716 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 GTF2IRD2Q86UP8 949 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 KIF18BQ86Y91 864 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 HS3ST5Q8IZT8 346 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 ZNF433Q8N7K0 673 aaPredicted RBP8.43□□□□□ -1.06
PCDH9-202ENST00000377865 NEIL3Q8TAT5 605 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 UBTD2Q8WUN7 234 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 MCCC1Q96RQ3 725 aaPredicted RBP8.43□□□□□ -1.06
PCDH9-202ENST00000377865 DPH2Q9BQC3 489 aaPredicted RBP8.43□□□□□ -1.06
PCDH9-202ENST00000377865 BRD7Q9NPI1 651 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 ZCCHC3Q9NUD5 404 aaKnown RBP8.43□□□□□ -1.06
PCDH9-202ENST00000377865 CDH10Q9Y6N8 788 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 COL5A3P25940 1745 aaPredicted RBP8.43□□□□□ -1.06
PCDH9-202ENST00000377865 OR7A10O76100 309 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 ATXN1LP0C7T5 689 aaKnown RBP8.43□□□□□ -1.06
PCDH9-202ENST00000377865 MPIP34949 423 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 RGS6P49758 472 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 CREB5Q02930 508 aa8.43□□□□□ -1.06
PCDH9-202ENST00000377865 CDC20Q12834 499 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms