RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 MAP6Q96JE9 813 aa16.44■□□□□ 0.22
TRIM27-201ENST00000377194 PANX1Q96RD7 426 aa16.44■□□□□ 0.22
TRIM27-201ENST00000377194 KCNS3Q9BQ31 491 aa16.44■□□□□ 0.22
TRIM27-201ENST00000377194 FAM83CQ9BQN1 747 aa16.44■□□□□ 0.22
TRIM27-201ENST00000377194 ITPAQ9BY32 194 aa16.44■□□□□ 0.22
TRIM27-201ENST00000377194 OR51E2Q9H255 320 aa16.44■□□□□ 0.22
TRIM27-201ENST00000377194 MAGIXQ9H6Y5 334 aa16.44■□□□□ 0.22
TRIM27-201ENST00000377194 ABCG2Q9UNQ0 655 aa16.44■□□□□ 0.22
TRIM27-201ENST00000377194 MAGEB17A8MXT2 336 aa16.44■□□□□ 0.22
TRIM27-201ENST00000377194 H3BQ06 376 aaPredicted RBP16.44■□□□□ 0.22
TRIM27-201ENST00000377194 K7ESM1 405 aa16.44■□□□□ 0.22
TRIM27-201ENST00000377194 LAMP1P11279 417 aa16.44■□□□□ 0.22
TRIM27-201ENST00000377194 PRLHRP49683 370 aa16.44■□□□□ 0.22
TRIM27-201ENST00000377194 TUBA1BP68363 451 aa16.44■□□□□ 0.22
TRIM27-201ENST00000377194 TUBA1AQ71U36 451 aa16.44■□□□□ 0.22
TRIM27-201ENST00000377194 AMER2Q8N7J2 671 aa16.44■□□□□ 0.22
TRIM27-201ENST00000377194 VN1R2Q8NFZ6 395 aa16.44■□□□□ 0.22
TRIM27-201ENST00000377194 TIFAQ96CG3 184 aa16.44■□□□□ 0.22
TRIM27-201ENST00000377194 SAMD11Q96NU1 681 aa16.44■□□□□ 0.22
TRIM27-201ENST00000377194 SDHCQ99643 169 aaPredicted RBP16.44■□□□□ 0.22
TRIM27-201ENST00000377194 APOL4Q9BPW4 351 aa16.44■□□□□ 0.22
TRIM27-201ENST00000377194 RANGRFQ9HD47 186 aaPredicted RBP16.44■□□□□ 0.22
TRIM27-201ENST00000377194 AASDHPPTQ9NRN7 309 aa16.44■□□□□ 0.22
TRIM27-201ENST00000377194 TBC1D24Q9ULP9 559 aa16.44■□□□□ 0.22
TRIM27-201ENST00000377194 AP3M1Q9Y2T2 418 aa16.44■□□□□ 0.22
TRIM27-201ENST00000377194 M0R082 166 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 CLIC1O00299 241 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 KPNA3O00505 521 aaPredicted RBP16.43■□□□□ 0.22
TRIM27-201ENST00000377194 FPGTO14772 594 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 SPINT1O43278 529 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 ATG13O75143 517 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 ENGP17813 658 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 KCNC3Q14003 757 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 ZNF517Q6ZMY9 492 aaPredicted RBP16.43■□□□□ 0.22
TRIM27-201ENST00000377194 ZNF621Q6ZSS3 439 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 CCDC71Q8IV32 467 aaPredicted RBP16.43■□□□□ 0.22
TRIM27-201ENST00000377194 FAM9CQ8IZT9 166 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 ZNF557Q8N988 423 aaPredicted RBP16.43■□□□□ 0.22
TRIM27-201ENST00000377194 RSPRY1Q96DX4 576 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 NECTIN4Q96NY8 510 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 VPS35Q96QK1 796 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 RUBCNLQ9H714 662 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 NFKBIL1Q9UBC1 381 aaPredicted RBP16.43■□□□□ 0.22
TRIM27-201ENST00000377194 PCM1Q15154 2024 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 C12orf71A8MTZ7 269 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 CTDSP2O14595 271 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 UGDHO60701 494 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 CPNE3O75131 537 aaKnown RBP16.43■□□□□ 0.22
TRIM27-201ENST00000377194 FGF19O95750 216 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 CYP17A1P05093 508 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 UGT2B10P36537 528 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 CTSKP43235 329 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 DGKGP49619 791 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 IRF3Q14653 427 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 DUOXA1Q1HG43 343 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 KDM4DQ6B0I6 523 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 OR5H6Q8NGV6 325 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 PHOX2BQ99453 314 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 DPH2Q9BQC3 489 aaPredicted RBP16.43■□□□□ 0.22
TRIM27-201ENST00000377194 CHCHD6Q9BRQ6 235 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 CCM2Q9BSQ5 444 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 SGK2Q9HBY8 427 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 CCNB1IP1Q9NPC3 277 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 HSPE1-MOB4S4R3N1 261 aa16.43■□□□□ 0.22
TRIM27-201ENST00000377194 PLK4O00444 970 aa16.42■□□□□ 0.22
TRIM27-201ENST00000377194 KCNK5O95279 499 aa16.42■□□□□ 0.22
TRIM27-201ENST00000377194 ZNF682O95780 498 aa16.42■□□□□ 0.22
TRIM27-201ENST00000377194 SOD1P00441 154 aa16.42■□□□□ 0.22
TRIM27-201ENST00000377194 FGBP02675 491 aa16.42■□□□□ 0.22
TRIM27-201ENST00000377194 IFI30P13284 250 aa16.42■□□□□ 0.22
TRIM27-201ENST00000377194 HLA-EP13747 358 aa16.42■□□□□ 0.22
TRIM27-201ENST00000377194 COX7A2P14406 83 aa16.42■□□□□ 0.22
TRIM27-201ENST00000377194 ACPPP15309 386 aa16.42■□□□□ 0.22
TRIM27-201ENST00000377194 HOXA9P31269 272 aa16.42■□□□□ 0.22
TRIM27-201ENST00000377194 SLC15A1P46059 708 aa16.42■□□□□ 0.22
TRIM27-201ENST00000377194 CYP4F2P78329 520 aa16.42■□□□□ 0.22
TRIM27-201ENST00000377194 RAE1P78406 368 aaKnown RBP16.42■□□□□ 0.22
TRIM27-201ENST00000377194 PRKCDQ05655 676 aa16.42■□□□□ 0.22
TRIM27-201ENST00000377194 CSTF3Q12996 717 aaKnown RBP16.42■□□□□ 0.22
TRIM27-201ENST00000377194 SPANXN2Q5MJ10 180 aa16.42■□□□□ 0.22
TRIM27-201ENST00000377194 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.42■□□□□ 0.22
TRIM27-201ENST00000377194 NXPE3Q969Y0 559 aa16.42■□□□□ 0.22
TRIM27-201ENST00000377194 ZNF717Q9BY31 904 aaPredicted RBP16.42■□□□□ 0.22
TRIM27-201ENST00000377194 MMP28Q9H239 520 aa16.42■□□□□ 0.22
TRIM27-201ENST00000377194 NDRG4Q9ULP0 352 aaKnown RBP16.42■□□□□ 0.22
TRIM27-201ENST00000377194 MN1Q10571 1320 aaPredicted RBP16.42■□□□□ 0.22
TRIM27-201ENST00000377194 PRRT4C9JH25 899 aa16.42■□□□□ 0.22
TRIM27-201ENST00000377194 LOC110117498-PIK3R3F6TDL0 507 aa16.42■□□□□ 0.22
TRIM27-201ENST00000377194 H0YIV9 168 aa16.42■□□□□ 0.22
TRIM27-201ENST00000377194 WBP4O75554 376 aaKnown RBP16.42■□□□□ 0.22
TRIM27-201ENST00000377194 CPSF4O95639 269 aaKnown RBP16.42■□□□□ 0.22
TRIM27-201ENST00000377194 AZGP1P25311 298 aaKnown RBP16.42■□□□□ 0.22
TRIM27-201ENST00000377194 ACSM2AQ08AH3 577 aa16.42■□□□□ 0.22
TRIM27-201ENST00000377194 ACSM2BQ68CK6 577 aa16.42■□□□□ 0.22
TRIM27-201ENST00000377194 OR7G3Q8NG95 312 aa16.42■□□□□ 0.22
TRIM27-201ENST00000377194 NELL1Q92832 810 aa16.42■□□□□ 0.22
TRIM27-201ENST00000377194 NEIL2Q969S2 332 aa16.42■□□□□ 0.22
TRIM27-201ENST00000377194 TOR4AQ9NXH8 423 aa16.42■□□□□ 0.22
TRIM27-201ENST00000377194 SPEF1Q9Y4P9 236 aa16.42■□□□□ 0.22
TRIM27-201ENST00000377194 OTOL1A6NHN0 477 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms