RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 COX14Q96I36 57 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 PLA2G2FQ9BZM2 168 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 IGFLR1Q9H665 355 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 DMRT3Q9NQL9 472 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 CCDC177Q9NQR7 707 aaPredicted RBP13.39□□□□□ -0.27
MSH5-202ENST00000375740 OBP2AQ9NY56 170 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 VNN3Q9NY84 501 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 GDE1Q9NZC3 331 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 FZD4Q9ULV1 537 aa13.39□□□□□ -0.27
MSH5-202ENST00000375740 KIF26AQ9ULI4 1882 aaPredicted RBP13.39□□□□□ -0.27
MSH5-202ENST00000375740 ZNF99A8MXY4 864 aaPredicted RBP13.38□□□□□ -0.27
MSH5-202ENST00000375740 HS6ST1O60243 411 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 KAT7O95251 611 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 PCCBP05166 539 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 NUDT7P0C024 238 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 HOXB6P17509 224 aaKnown RBP13.38□□□□□ -0.27
MSH5-202ENST00000375740 CASP3P42574 277 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 MAGEA2P43356 314 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 ZNF385BQ569K4 471 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 STEAP3Q658P3 488 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 RFPL4BQ6ZWI9 263 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 COMMD6Q7Z4G1 85 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 HEATR4Q86WZ0 1026 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 SIX5Q8N196 739 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 ZNF555Q8NEP9 628 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 RHOXF1Q8NHV9 184 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 DYNC2LI1Q8TCX1 351 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 SETD7Q8WTS6 366 aaKnown RBP13.38□□□□□ -0.27
MSH5-202ENST00000375740 RAB7BQ96AH8 199 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 NODALQ96S42 347 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 NRTNQ99748 197 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 LGR4Q9BXB1 951 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 TRPV4Q9HBA0 871 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 ABCG2Q9UNQ0 655 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 MAPRE3Q9UPY8 281 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 TESMINQ9Y4I5 508 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 C5orf42Q9H799 3197 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 ATG2AQ2TAZ0 1938 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 C1orf226A1L170 272 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 NTRK1P04629 796 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 CD6P30203 668 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 EIF2DP41214 584 aaKnown RBP13.38□□□□□ -0.27
MSH5-202ENST00000375740 MC1RQ01726 317 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 DGUOKQ16854 277 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 UNC5DQ6UXZ4 953 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 ADAMTSL4Q6UY14 1074 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 VTCN1Q7Z7D3 282 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 AMZ2Q86W34 360 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 SYNPOQ8N3V7 929 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 CPA6Q8N4T0 437 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 PIK3C3Q8NEB9 887 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 OR4K1Q8NGD4 311 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.38□□□□□ -0.27
MSH5-202ENST00000375740 CNIH3Q8TBE1 160 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 DACH2Q96NX9 599 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 RHNO1Q9BSD3 238 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 DSN1Q9H410 356 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 REEP4Q9H6H4 257 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 IL1RAPQ9NPH3 570 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 TM7SF3Q9NS93 570 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 RPS6KA6Q9UK32 745 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 UGT2A1Q9Y4X1 527 aa13.38□□□□□ -0.27
MSH5-202ENST00000375740 PI15O43692 258 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 DYRK3O43781 588 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 KLHL18O94889 574 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 ABCB1P08183 1280 aaPredicted RBP13.37□□□□□ -0.27
MSH5-202ENST00000375740 GTF2E2P29084 291 aaKnown RBP13.37□□□□□ -0.27
MSH5-202ENST00000375740 DRD3P35462 400 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 PPP5CP53041 499 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 ZNF763Q0D2J5 394 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 CDC20Q12834 499 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 EPS8Q12929 822 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 KCNAB2Q13303 367 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 GAB1Q13480 694 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 HIPK1Q86Z02 1210 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 DCP2Q8IU60 420 aaKnown RBP13.37□□□□□ -0.27
MSH5-202ENST00000375740 OR4A15Q8NGL6 344 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 RAD51AP1Q96B01 352 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 BARD1Q99728 777 aaKnown RBP13.37□□□□□ -0.27
MSH5-202ENST00000375740 SLIRPQ9GZT3 109 aaKnown RBP13.37□□□□□ -0.27
MSH5-202ENST00000375740 SIRT5Q9NXA8 310 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 ATP6V1HQ9UI12 483 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 YBX2Q9Y2T7 364 aaKnown RBP13.37□□□□□ -0.27
MSH5-202ENST00000375740 CAB39Q9Y376 341 aaPredicted RBP13.37□□□□□ -0.27
MSH5-202ENST00000375740 SNX5Q9Y5X3 404 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 hCG_2039718K7EN88 272 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 SLC1A7O00341 560 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 MID1O15344 667 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 DIRAS1O95057 198 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 ITIH1P19827 911 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 CLK3P49761 638 aaKnown RBP13.37□□□□□ -0.27
MSH5-202ENST00000375740 TAS2R38P59533 333 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 C2orf80Q0P641 193 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 WSCD2Q2TBF2 565 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 PRAMEF14Q5SWL7 426 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 PRAMEF13Q5VWM6 474 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 FAM46CQ5VWP2 391 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.37□□□□□ -0.27
MSH5-202ENST00000375740 CBLL1Q75N03 491 aa13.37□□□□□ -0.27
MSH5-202ENST00000375740 PDZD3Q86UT5 571 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms