RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 BRINP2Q9C0B6 783 aa16.66■□□□□ 0.26
C9orf43-202ENST00000374165 RNPEPL1Q9HAU8 725 aa16.66■□□□□ 0.26
C9orf43-202ENST00000374165 APMAPQ9HDC9 416 aa16.66■□□□□ 0.26
C9orf43-202ENST00000374165 NMRK1Q9NWW6 199 aa16.66■□□□□ 0.26
C9orf43-202ENST00000374165 SIDT1Q9NXL6 827 aaKnown RBP16.66■□□□□ 0.26
C9orf43-202ENST00000374165 NOP53Q9NZM5 478 aaKnown RBP16.66■□□□□ 0.26
C9orf43-202ENST00000374165 NKX1-2Q9UD57 310 aaPredicted RBP16.66■□□□□ 0.26
C9orf43-202ENST00000374165 SPTBN4Q9H254 2564 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 ANKRD28O15084 1053 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 ZSCAN9O15535 394 aaPredicted RBP16.65■□□□□ 0.26
C9orf43-202ENST00000374165 MAP3K7O43318 606 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 TMPRSS11DO60235 418 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 OR2B3O76000 313 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 MSL3P1P0C860 447 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 CCL4P13236 92 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 IL1RNP18510 177 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 MRPL19P49406 292 aaKnown RBP16.65■□□□□ 0.26
C9orf43-202ENST00000374165 ACTR3P61158 418 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 STXBP1P61764 594 aaKnown RBP16.65■□□□□ 0.26
C9orf43-202ENST00000374165 BTN3A2P78410 334 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 IRX1P78414 480 aaPredicted RBP16.65■□□□□ 0.26
C9orf43-202ENST00000374165 FOXM1Q08050 763 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 TMEM35AQ53FP2 167 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 CYP20A1Q6UW02 462 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 ZNF655Q8N720 491 aaPredicted RBP16.65■□□□□ 0.26
C9orf43-202ENST00000374165 C10orf90Q96M02 699 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 TSSK3Q96PN8 268 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 IRAK4Q9NWZ3 460 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 NDE1Q9NXR1 346 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 PRPF19Q9UMS4 504 aaKnown RBP16.65■□□□□ 0.26
C9orf43-202ENST00000374165 PCDHGA1Q9Y5H4 931 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 PIEZO1Q92508 2521 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 ARHGAP10A1A4S6 786 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 PMS2P1A4D2B8 440 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 H0Y3Z8 333 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 NR5A2O00482 541 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 PCDH7O60245 1069 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 TIAF1O95411 115 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 ANXA4P09525 319 aaPredicted RBP16.65■□□□□ 0.26
C9orf43-202ENST00000374165 TIA1P31483 386 aaKnown RBP eCLIP16.65■□□□□ 0.26
C9orf43-202ENST00000374165 UFM1P61960 85 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 E2F1Q01094 437 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 TMTC4Q5T4D3 741 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 CDCP2Q5VXM1 449 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 TRIM40Q6P9F5 258 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 KRTCAP2Q8N6L1 136 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 ACOT4Q8N9L9 421 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 GFM2Q969S9 779 aaKnown RBP16.65■□□□□ 0.26
C9orf43-202ENST00000374165 KCNC2Q96PR1 638 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 CDRT15Q96T59 188 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 DDX31Q9H8H2 851 aaKnown RBP16.65■□□□□ 0.26
C9orf43-202ENST00000374165 SIRT5Q9NXA8 310 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 PACSIN3Q9UKS6 424 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 TMED5Q9Y3A6 229 aa16.65■□□□□ 0.26
C9orf43-202ENST00000374165 GNG14A0A1W2PPG7 69 aa16.64■□□□□ 0.25
C9orf43-202ENST00000374165 HYKKA2RU49 373 aa16.64■□□□□ 0.25
C9orf43-202ENST00000374165 ZNF860A6NHJ4 632 aa16.64■□□□□ 0.25
C9orf43-202ENST00000374165 CFLARO15519 480 aa16.64■□□□□ 0.25
C9orf43-202ENST00000374165 CAPN3P20807 821 aa16.64■□□□□ 0.25
C9orf43-202ENST00000374165 HIST1H1TP22492 207 aaPredicted RBP16.64■□□□□ 0.25
C9orf43-202ENST00000374165 ATP5A1P25705 553 aaKnown RBP16.64■□□□□ 0.25
C9orf43-202ENST00000374165 CERS1P27544 350 aa16.64■□□□□ 0.25
C9orf43-202ENST00000374165 SSR2P43308 183 aa16.64■□□□□ 0.25
C9orf43-202ENST00000374165 ERFP50548 548 aa16.64■□□□□ 0.25
C9orf43-202ENST00000374165 SIM1P81133 766 aaPredicted RBP16.64■□□□□ 0.25
C9orf43-202ENST00000374165 SMU1Q2TAY7 513 aa16.64■□□□□ 0.25
C9orf43-202ENST00000374165 MANEAQ5SRI9 462 aa16.64■□□□□ 0.25
C9orf43-202ENST00000374165 C6orf163Q5TEZ5 329 aa16.64■□□□□ 0.25
C9orf43-202ENST00000374165 BNC2Q6ZN30 1099 aaPredicted RBP16.64■□□□□ 0.25
C9orf43-202ENST00000374165 MMP21Q8N119 569 aa16.64■□□□□ 0.25
C9orf43-202ENST00000374165 BMPERQ8N8U9 685 aa16.64■□□□□ 0.25
C9orf43-202ENST00000374165 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.64■□□□□ 0.25
C9orf43-202ENST00000374165 PROKR1Q8TCW9 393 aa16.64■□□□□ 0.25
C9orf43-202ENST00000374165 GAL3ST3Q96A11 431 aa16.64■□□□□ 0.25
C9orf43-202ENST00000374165 DCLRE1BQ9H816 532 aa16.64■□□□□ 0.25
C9orf43-202ENST00000374165 POMPQ9Y244 141 aa16.64■□□□□ 0.25
C9orf43-202ENST00000374165 EIF3LQ9Y262 564 aaKnown RBP16.64■□□□□ 0.25
C9orf43-202ENST00000374165 A0A0A6YYD5 115 aa16.63■□□□□ 0.25
C9orf43-202ENST00000374165 MRASO14807 208 aa16.63■□□□□ 0.25
C9orf43-202ENST00000374165 FOXS1O43638 330 aa16.63■□□□□ 0.25
C9orf43-202ENST00000374165 DKK1O94907 266 aa16.63■□□□□ 0.25
C9orf43-202ENST00000374165 LRATO95237 230 aa16.63■□□□□ 0.25
C9orf43-202ENST00000374165 FTH1P19P0C7X4 201 aa16.63■□□□□ 0.25
C9orf43-202ENST00000374165 ALOX12P18054 663 aa16.63■□□□□ 0.25
C9orf43-202ENST00000374165 IL12AP29459 219 aa16.63■□□□□ 0.25
C9orf43-202ENST00000374165 CSTF2P33240 577 aaKnown RBP eCLIP16.63■□□□□ 0.25
C9orf43-202ENST00000374165 ZFP36L2P47974 494 aaKnown RBP16.63■□□□□ 0.25
C9orf43-202ENST00000374165 OLR1P78380 273 aa16.63■□□□□ 0.25
C9orf43-202ENST00000374165 ISXQ2M1V0 245 aa16.63■□□□□ 0.25
C9orf43-202ENST00000374165 VPS26BQ4G0F5 336 aa16.63■□□□□ 0.25
C9orf43-202ENST00000374165 CCNYL2Q5T2Q4 361 aa16.63■□□□□ 0.25
C9orf43-202ENST00000374165 BLOC1S3Q6QNY0 202 aa16.63■□□□□ 0.25
C9orf43-202ENST00000374165 RETREG3Q86VR2 466 aa16.63■□□□□ 0.25
C9orf43-202ENST00000374165 ENDOVQ8N8Q3 282 aaKnown RBP16.63■□□□□ 0.25
C9orf43-202ENST00000374165 OR9A4Q8NGU2 314 aa16.63■□□□□ 0.25
C9orf43-202ENST00000374165 NETO1Q8TDF5 533 aa16.63■□□□□ 0.25
C9orf43-202ENST00000374165 UCN3Q969E3 161 aa16.63■□□□□ 0.25
C9orf43-202ENST00000374165 PMEPA1Q969W9 287 aa16.63■□□□□ 0.25
C9orf43-202ENST00000374165 METTL2AQ96IZ6 378 aaKnown RBP16.63■□□□□ 0.25
C9orf43-202ENST00000374165 QRFPRQ96P65 431 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms