RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 CERS4Q9HA82 394 aa22.76■■□□□ 1.23
CDK9-201ENST00000373264 MYNNQ9NPC7 610 aa22.76■■□□□ 1.23
CDK9-201ENST00000373264 TAS2R9Q9NYW1 312 aa22.76■■□□□ 1.23
CDK9-201ENST00000373264 CORO2BQ9UQ03 480 aa22.76■■□□□ 1.23
CDK9-201ENST00000373264 A0A0G2JN53 185 aa22.76■■□□□ 1.23
CDK9-201ENST00000373264 PCDH17O14917 1159 aa22.76■■□□□ 1.23
CDK9-201ENST00000373264 RGS10O43665 173 aa22.76■■□□□ 1.23
CDK9-201ENST00000373264 CDK6Q00534 326 aa22.76■■□□□ 1.23
CDK9-201ENST00000373264 NR1D2Q14995 579 aa22.76■■□□□ 1.23
CDK9-201ENST00000373264 SLC44A2Q8IWA5 706 aaPredicted RBP22.76■■□□□ 1.23
CDK9-201ENST00000373264 OR10G2Q8NGC3 310 aa22.76■■□□□ 1.23
CDK9-201ENST00000373264 YIPF6Q96EC8 236 aa22.76■■□□□ 1.23
CDK9-201ENST00000373264 PITX2Q99697 317 aa22.76■■□□□ 1.23
CDK9-201ENST00000373264 ITM2CQ9NQX7 267 aa22.76■■□□□ 1.23
CDK9-201ENST00000373264 RAB23Q9ULC3 237 aa22.76■■□□□ 1.23
CDK9-201ENST00000373264 PPM1DO15297 605 aa22.75■■□□□ 1.23
CDK9-201ENST00000373264 TEAD4Q15561 434 aa22.75■■□□□ 1.23
CDK9-201ENST00000373264 ERN2Q76MJ5 926 aaKnown RBP22.75■■□□□ 1.23
CDK9-201ENST00000373264 FAM129CQ86XR2 697 aa22.75■■□□□ 1.23
CDK9-201ENST00000373264 TFGQ92734 400 aaPredicted RBP22.75■■□□□ 1.23
CDK9-201ENST00000373264 TMEM245Q9H330 911 aa22.75■■□□□ 1.23
CDK9-201ENST00000373264 PMF1-BGLAPU3KQ54 211 aa22.75■■□□□ 1.23
CDK9-201ENST00000373264 IGLON5A6NGN9 336 aa22.75■■□□□ 1.23
CDK9-201ENST00000373264 WASHC1A8K0Z3 465 aa22.75■■□□□ 1.23
CDK9-201ENST00000373264 E9PQ18 207 aa22.75■■□□□ 1.23
CDK9-201ENST00000373264 GABARAPO95166 117 aa22.75■■□□□ 1.23
CDK9-201ENST00000373264 RECKO95980 971 aa22.75■■□□□ 1.23
CDK9-201ENST00000373264 IDH2P48735 452 aaKnown RBP22.75■■□□□ 1.23
CDK9-201ENST00000373264 ALDH9A1P49189 494 aa22.75■■□□□ 1.23
CDK9-201ENST00000373264 WASH2PQ6VEQ5 465 aa22.75■■□□□ 1.23
CDK9-201ENST00000373264 SLCO6A1Q86UG4 719 aa22.75■■□□□ 1.23
CDK9-201ENST00000373264 FAM20CQ8IXL6 584 aa22.75■■□□□ 1.23
CDK9-201ENST00000373264 OR4C15Q8NGM1 316 aa22.75■■□□□ 1.23
CDK9-201ENST00000373264 HRASLS5Q96KN8 279 aa22.75■■□□□ 1.23
CDK9-201ENST00000373264 ZNF300Q96RE9 604 aaPredicted RBP22.75■■□□□ 1.23
CDK9-201ENST00000373264 SPATA9Q9BWV2 254 aa22.75■■□□□ 1.23
CDK9-201ENST00000373264 ZNF717Q9BY31 904 aaPredicted RBP22.75■■□□□ 1.23
CDK9-201ENST00000373264 MIEF1Q9NQG6 463 aa22.75■■□□□ 1.23
CDK9-201ENST00000373264 ATAD3AQ9NVI7 634 aa22.75■■□□□ 1.23
CDK9-201ENST00000373264 GMEB1Q9Y692 573 aa22.75■■□□□ 1.23
CDK9-201ENST00000373264 MUC22E2RYF6 1773 aaPredicted RBP22.75■■□□□ 1.23
CDK9-201ENST00000373264 TBC1D3BA6NDS4 549 aa22.74■■□□□ 1.23
CDK9-201ENST00000373264 EPHX1P07099 455 aa22.74■■□□□ 1.23
CDK9-201ENST00000373264 PTGER1P34995 402 aa22.74■■□□□ 1.23
CDK9-201ENST00000373264 VASPP50552 380 aaPredicted RBP22.74■■□□□ 1.23
CDK9-201ENST00000373264 DPTQ07507 201 aa22.74■■□□□ 1.23
CDK9-201ENST00000373264 DUSP7Q16829 419 aa22.74■■□□□ 1.23
CDK9-201ENST00000373264 SYT16Q17RD7 645 aa22.74■■□□□ 1.23
CDK9-201ENST00000373264 TBC1D25Q3MII6 688 aa22.74■■□□□ 1.23
CDK9-201ENST00000373264 IFI44LQ53G44 452 aa22.74■■□□□ 1.23
CDK9-201ENST00000373264 TNFAIP8L2Q6P589 184 aaPredicted RBP22.74■■□□□ 1.23
CDK9-201ENST00000373264 IGFN1Q86VF2 1251 aa22.74■■□□□ 1.23
CDK9-201ENST00000373264 LGI4Q8N135 537 aa22.74■■□□□ 1.23
CDK9-201ENST00000373264 AMER3Q8N944 861 aa22.74■■□□□ 1.23
CDK9-201ENST00000373264 LINC00615Q96LM1 132 aaPredicted RBP22.74■■□□□ 1.23
CDK9-201ENST00000373264 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP22.74■■□□□ 1.23
CDK9-201ENST00000373264 MAPK9P45984 424 aa22.74■■□□□ 1.23
CDK9-201ENST00000373264 ITGADQ13349 1161 aa22.74■■□□□ 1.23
CDK9-201ENST00000373264 PROX2Q3B8N5 592 aa22.74■■□□□ 1.23
CDK9-201ENST00000373264 FAM109BQ6ICB4 259 aaPredicted RBP22.74■■□□□ 1.23
CDK9-201ENST00000373264 SLC9B2Q86UD5 537 aa22.74■■□□□ 1.23
CDK9-201ENST00000373264 GTPBP3Q969Y2 492 aaKnown RBP22.74■■□□□ 1.23
CDK9-201ENST00000373264 CXorf40BQ96DE9 158 aa22.74■■□□□ 1.23
CDK9-201ENST00000373264 GABARAPL3Q9BY60 117 aa22.74■■□□□ 1.23
CDK9-201ENST00000373264 EHD1Q9H4M9 534 aa22.74■■□□□ 1.23
CDK9-201ENST00000373264 DYRK4Q9NR20 520 aa22.74■■□□□ 1.23
CDK9-201ENST00000373264 OR1A2Q9Y585 309 aa22.74■■□□□ 1.23
CDK9-201ENST00000373264 HSPE1-MOB4S4R3N1 261 aa22.74■■□□□ 1.23
CDK9-201ENST00000373264 H7BY64 318 aa22.73■■□□□ 1.23
CDK9-201ENST00000373264 SCAMP1O15126 338 aa22.73■■□□□ 1.23
CDK9-201ENST00000373264 CXCR4P61073 352 aa22.73■■□□□ 1.23
CDK9-201ENST00000373264 PDZD3Q86UT5 571 aa22.73■■□□□ 1.23
CDK9-201ENST00000373264 CXorf40AQ8TE69 158 aa22.73■■□□□ 1.23
CDK9-201ENST00000373264 KLK6Q92876 244 aa22.73■■□□□ 1.23
CDK9-201ENST00000373264 PRAP1Q96NZ9 151 aa22.73■■□□□ 1.23
CDK9-201ENST00000373264 DPEP2Q9H4A9 486 aa22.73■■□□□ 1.23
CDK9-201ENST00000373264 HEATR5BQ9P2D3 2071 aa22.73■■□□□ 1.23
CDK9-201ENST00000373264 COL9A2Q14055 689 aaPredicted RBP22.73■■□□□ 1.23
CDK9-201ENST00000373264 SYT6Q5T7P8 510 aaPredicted RBP22.73■■□□□ 1.23
CDK9-201ENST00000373264 P2RY8Q86VZ1 359 aa22.73■■□□□ 1.23
CDK9-201ENST00000373264 AMZ2Q86W34 360 aa22.73■■□□□ 1.23
CDK9-201ENST00000373264 RAB8BQ92930 207 aa22.73■■□□□ 1.23
CDK9-201ENST00000373264 SH3YL1Q96HL8 342 aaPredicted RBP22.73■■□□□ 1.23
CDK9-201ENST00000373264 C2orf16Q68DN1 1984 aa22.73■■□□□ 1.23
CDK9-201ENST00000373264 ALPK3Q96L96 1907 aa22.72■■□□□ 1.23
CDK9-201ENST00000373264 PI15O43692 258 aa22.72■■□□□ 1.23
CDK9-201ENST00000373264 B4GALT2O60909 372 aa22.72■■□□□ 1.23
CDK9-201ENST00000373264 FCHO2Q0JRZ9 810 aa22.72■■□□□ 1.23
CDK9-201ENST00000373264 ZNF765Q7L2R6 523 aa22.72■■□□□ 1.23
CDK9-201ENST00000373264 UTP15Q8TED0 518 aaKnown RBP22.72■■□□□ 1.23
CDK9-201ENST00000373264 ASB16Q96NS5 453 aa22.72■■□□□ 1.23
CDK9-201ENST00000373264 SIGLEC11Q96RL6 698 aa22.72■■□□□ 1.23
CDK9-201ENST00000373264 PRSS16Q9NQE7 514 aa22.72■■□□□ 1.23
CDK9-201ENST00000373264 MBNL1Q9NR56 388 aaKnown RBP22.72■■□□□ 1.23
CDK9-201ENST00000373264 SERGEFQ9UGK8 458 aa22.72■■□□□ 1.23
CDK9-201ENST00000373264 DOLKQ9UPQ8 538 aa22.72■■□□□ 1.23
CDK9-201ENST00000373264 C17orf113A0A1B0GUU1 675 aa22.72■■□□□ 1.23
CDK9-201ENST00000373264 DCDC5Q6ZRR9 648 aa22.72■■□□□ 1.23
CDK9-201ENST00000373264 OLIG3Q7RTU3 272 aa22.72■■□□□ 1.23
CDK9-201ENST00000373264 HORMAD2Q8N7B1 307 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms